Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735723

Identifier: 187735723

GI number: 187735723

Start: 1477983

End: 1478759

Strand: Direct

Name: 187735723

Synonym: Amuc_1229

Alternate gene names: NA

Gene position: 1477983-1478759 (Clockwise)

Preceding gene: 187735719

Following gene: 187735724

Centisome position: 55.48

GC content: 49.81

Gene sequence:

>777_bases
ATGTGGGTCAAAGTATCAATAGCAGCCTTGGTCATTGCTCTTCTCGGAGGAGCCATGTATTATCTTGATAACGAGGAAGC
TCTAACCAAGGAGCGTAGGGAATGTGCTTCCCGCTACAAGAACCTGAACGGCCTTCGTGGCGAATTTACGGAAGAAAAGA
CGAAATATGTCGATTTCCTGGTGAAGAATGAGGCTCTGACGAATGACATCAATGCTTTAACCAAGGAGAAGGATGAACTG
GAAGTAAAGAATCAGGAATTGGCCTCAGCCAATGAGGCCAAGAAATCTGACCTTCAAACGCAGCAAACCGCTTTGGCGGA
ATTGCAATCCAAGAGTAAGGATATGGAAAGTATCCAAGCCATTGCTGACAGAATCAAGGGGCTGGAAGAAGAGTCCAAGC
AGTTGGAAGTGGTTAAGCAGGCGGAACAGGGAAAACATGATGCCATCGTCGCTGAAACTGAACAGCTTGTTGTGAATAAT
GCCGCTCTTCGTCAGCTCAAGGCCGACCAGGATGCCCGCCTTTCTCCGCCCAACCTGAAAACGAGGGTTTCCCAGGTGAT
TCATGATTTTAATGTAGTTGTGATTGACGGAGGAGCCGCCGATCTGGGCGTGGTGCCCGGTTCCAAGTTGGCCGTCATGA
GGGACGGCAACAAAATTGCCGAGCTTGACGTAAACGCTGTTGAATCCCGTGTTTCCACGGCCACTATTCTACCAAGTACG
GTAACCGCCGGCGAACGTGTTGAAGCCGGAGACGTCGTTGTATCTGTTCGTCCCTAG

Upstream 100 bases:

>100_bases
TCAAGAAAACAATGAGGATGTCATTTTGATATTGAAATCTGAAAATGTTCATGCCAATCTCACAAAAGTAACAGGAACCT
TCTCATCTCTATAATTTCCT

Downstream 100 bases:

>100_bases
CATTTTTCCGGTTCAATACACTCCATACACTCTCACATACATACACAATGAAAACTGTCTTAGTAGTTTTATTGATTCTT
GCAGCAGGGGCGGGCGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFLVKNEALTNDINALTKEKDEL
EVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQAIADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNN
AALRQLKADQDARLSPPNLKTRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST
VTAGERVEAGDVVVSVRP

Sequences:

>Translated_258_residues
MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFLVKNEALTNDINALTKEKDEL
EVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQAIADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNN
AALRQLKADQDARLSPPNLKTRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST
VTAGERVEAGDVVVSVRP
>Mature_258_residues
MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFLVKNEALTNDINALTKEKDEL
EVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQAIADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNN
AALRQLKADQDARLSPPNLKTRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST
VTAGERVEAGDVVVSVRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28171; Mature: 28171

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFL
CEEEHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VKNEALTNDINALTKEKDELEVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQA
HHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNNAALRQLKADQDARLSPPNLK
HHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
TRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST
HHHHHHHHCCCEEEEECCCCCEECCCCCCEEEEECCCEEEECCHHHHHHHHHHHHCCCCC
VTAGERVEAGDVVVSVRP
CCCCCCEECCCEEEEECC
>Mature Secondary Structure
MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFL
CEEEHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VKNEALTNDINALTKEKDELEVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQA
HHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNNAALRQLKADQDARLSPPNLK
HHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
TRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST
HHHHHHHHCCCEEEEECCCCCEECCCCCCEEEEECCCEEEECCHHHHHHHHHHHHCCCCC
VTAGERVEAGDVVVSVRP
CCCCCCEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA