Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735713
Identifier: 187735713
GI number: 187735713
Start: 1458428
End: 1458991
Strand: Reverse
Name: 187735713
Synonym: Amuc_1219
Alternate gene names: NA
Gene position: 1458991-1458428 (Counterclockwise)
Preceding gene: 187735715
Following gene: 187735712
Centisome position: 54.76
GC content: 48.94
Gene sequence:
>564_bases ATGAAGAATCAGGAAATACACTTGCCAACGCCCAATCCCGAGCATCCTTATGGAGGAGGAAACGGACGTTACCGTTTTCC GGATATCAACGGCATGAATTTACTGGGAGACAATATTTCCCTGCCTCCTATCGTTCCAAAAAGTTTCCATATCATGCTGA CTGTTTTTCACCCGGAAACTTTGTACGGAATGAAAAAGTGGCTTCCCTTCTGCGAGGACCTCCGCAAACAGTACAAACAT ACGCCAACCCCGGTGGAATATAGCATTTTGCTGGTTCTGCAGCCACCCCCCATTGAAGGTGATGTCCCCGCCTTTACACA GGCTCTGGGGGATTTTCCGGATTTTTACATGAAGACCAATTCCCTGATTTCCTATTATGACCAGTCTTTTGTACGCCGCA GACTTTCCCTTCACAAGAAGGCGGAAACAGCGATTGTCCTTCTGGACGGCAACGGCAATATCATCTGGAAGGATGACGGC GGGTTCACGGCCTCACGCGCGGAGCATTTGAAAGTTATCCTGGAAACTCTTTCTCCGCTGGCACCCAGGACAAGAACGCA TTAA
Upstream 100 bases:
>100_bases CCTTCCAACATAAAAAAGGCCCTTCCCCGCACCAATGAACATACCCTGTTCGGCAACCATCGACATGAACATTATTTCTT CGAATTTTGTCTAACAGAGC
Downstream 100 bases:
>100_bases AAGGAGAATGCGTCTTCTTCGCCTCATCCGCACTTTCCGTTTGAGGTTCCCTCCGGAATATCCCATACTGGCCTCATGCC TACCATTTCTCTTGCTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPETLYGMKKWLPFCEDLRKQYKH TPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTNSLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDG GFTASRAEHLKVILETLSPLAPRTRTH
Sequences:
>Translated_187_residues MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPETLYGMKKWLPFCEDLRKQYKH TPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTNSLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDG GFTASRAEHLKVILETLSPLAPRTRTH >Mature_187_residues MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPETLYGMKKWLPFCEDLRKQYKH TPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTNSLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDG GFTASRAEHLKVILETLSPLAPRTRTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21282; Mature: 21282
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPET CCCCEEECCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCHH LYGMKKWLPFCEDLRKQYKHTPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTN HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHH SLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDGGFTASRAEHLKVILETLSPL HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCC APRTRTH CCCCCCC >Mature Secondary Structure MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPET CCCCEEECCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCHH LYGMKKWLPFCEDLRKQYKHTPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTN HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHH SLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDGGFTASRAEHLKVILETLSPL HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCC APRTRTH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA