Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735713

Identifier: 187735713

GI number: 187735713

Start: 1458428

End: 1458991

Strand: Reverse

Name: 187735713

Synonym: Amuc_1219

Alternate gene names: NA

Gene position: 1458991-1458428 (Counterclockwise)

Preceding gene: 187735715

Following gene: 187735712

Centisome position: 54.76

GC content: 48.94

Gene sequence:

>564_bases
ATGAAGAATCAGGAAATACACTTGCCAACGCCCAATCCCGAGCATCCTTATGGAGGAGGAAACGGACGTTACCGTTTTCC
GGATATCAACGGCATGAATTTACTGGGAGACAATATTTCCCTGCCTCCTATCGTTCCAAAAAGTTTCCATATCATGCTGA
CTGTTTTTCACCCGGAAACTTTGTACGGAATGAAAAAGTGGCTTCCCTTCTGCGAGGACCTCCGCAAACAGTACAAACAT
ACGCCAACCCCGGTGGAATATAGCATTTTGCTGGTTCTGCAGCCACCCCCCATTGAAGGTGATGTCCCCGCCTTTACACA
GGCTCTGGGGGATTTTCCGGATTTTTACATGAAGACCAATTCCCTGATTTCCTATTATGACCAGTCTTTTGTACGCCGCA
GACTTTCCCTTCACAAGAAGGCGGAAACAGCGATTGTCCTTCTGGACGGCAACGGCAATATCATCTGGAAGGATGACGGC
GGGTTCACGGCCTCACGCGCGGAGCATTTGAAAGTTATCCTGGAAACTCTTTCTCCGCTGGCACCCAGGACAAGAACGCA
TTAA

Upstream 100 bases:

>100_bases
CCTTCCAACATAAAAAAGGCCCTTCCCCGCACCAATGAACATACCCTGTTCGGCAACCATCGACATGAACATTATTTCTT
CGAATTTTGTCTAACAGAGC

Downstream 100 bases:

>100_bases
AAGGAGAATGCGTCTTCTTCGCCTCATCCGCACTTTCCGTTTGAGGTTCCCTCCGGAATATCCCATACTGGCCTCATGCC
TACCATTTCTCTTGCTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPETLYGMKKWLPFCEDLRKQYKH
TPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTNSLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDG
GFTASRAEHLKVILETLSPLAPRTRTH

Sequences:

>Translated_187_residues
MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPETLYGMKKWLPFCEDLRKQYKH
TPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTNSLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDG
GFTASRAEHLKVILETLSPLAPRTRTH
>Mature_187_residues
MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPETLYGMKKWLPFCEDLRKQYKH
TPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTNSLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDG
GFTASRAEHLKVILETLSPLAPRTRTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21282; Mature: 21282

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPET
CCCCEEECCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCHH
LYGMKKWLPFCEDLRKQYKHTPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTN
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHH
SLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDGGFTASRAEHLKVILETLSPL
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
APRTRTH
CCCCCCC
>Mature Secondary Structure
MKNQEIHLPTPNPEHPYGGGNGRYRFPDINGMNLLGDNISLPPIVPKSFHIMLTVFHPET
CCCCEEECCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCHH
LYGMKKWLPFCEDLRKQYKHTPTPVEYSILLVLQPPPIEGDVPAFTQALGDFPDFYMKTN
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHH
SLISYYDQSFVRRRLSLHKKAETAIVLLDGNGNIIWKDDGGFTASRAEHLKVILETLSPL
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
APRTRTH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA