Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is purH [H]
Identifier: 187735700
GI number: 187735700
Start: 1441659
End: 1443206
Strand: Direct
Name: purH [H]
Synonym: Amuc_1206
Alternate gene names: 187735700
Gene position: 1441659-1443206 (Clockwise)
Preceding gene: 187735695
Following gene: 187735701
Centisome position: 54.11
GC content: 59.24
Gene sequence:
>1548_bases ATGGCTATTCAGCGCGCATTGATATCCGTTTCCGACAAGACCGGCCTGGAGGAGTTTGCCAAGGGCCTGCACGAGTTTGG AGTAGAGCTTATTTCCACTGGCGGGACCGCCGCTTTCCTGAAAGGCCTGGGCCTTCCGGTGATTGAGATTTCCGACTATA CCGGAGAACCGGAGTTATTTGAAGGGCGCCTGAAGACGCTTCATCCCATGGTGCACGGGGGCCTGCTGCACCGCCGCGAC AATGAGGAGCATGTGCGCCAGGCTAAGGAAAACGGCATCAAGCCCATCGACCTGGTCTGCGTGAATCTGTATCCTTTTGA AGAAACCGTCGCCAGGCCCGGAGTCACGCTGGAGGAAGCTATTGAAAAAATAGATATCGGCGGGCCGTCCATGCTCCGTT CCGCCGCCAAGAATTACGCTTCCGTCACGGTGGTTTCGGATCCCGCGGATTACGCGCGCATTCTGGATGAAATGCAGACC CACAAGGGGGATACGACCCTGAAGACCCGTGAAAACCTGGCGGTGAAGGTGTTTATGCGCACCTCCAATTACGATAACGC CATCACTAATTATCTTGGCCACCAGAGCGCGGAAAGCACCAAGGGCAGCTTCTGCATCTGCGCTCCCCTGTATCAGGAAT TGCGTTACGGGGACAATCCCCACCAGGAAGCCAGCCTGTACGGCAGCTTCGGGGATATTTTCCACCAGCTTCAGGGCAAG GAGCTTTCCTATACGAACGTGCTGGACATTGAAGGGGCAGCCGAGCTGATTACCCAGTTCCGCCGCCCGACGGTGGGCAT TTTGAAGCACACGAATCCCTGCGGCGTGGGCCAGGACGACGAAGACCTGCGCAACGCATGGCAGAAGGCTTTTGAAACGG ATACGCAGGCCCCCTTCGGCGGCGTGATCGTGGTCAACCGCCCGATGACGGAAGGCCTGGCCCGTGTGCTGAGCGCCATT TTCACGGATGTCATCATCGCTCCGGAGTATGATGCGGAAGCCCGCGCCATTCTCCAGAAGAAGAAAAATTGCCGCATCAT CCGCATGAACACGGAAGCCTGGATGAAGGCGCGCCGCGAACCCATCATCCGTTCCGCGCCCGGCGGGTTCATGACCATGA AGCGGGATACGGACGTGATGGGGCTGGACAATCTGGAAGCCAAGGTGGTGACCAAGCGCCCCCCGACCGAGGAAGAATTG ACCGCCATGCGTTTCAACTGGCGTGTCGTGAAGCAGGTTCATTCCAACGCCATCGTTTTTGGCGGTACGGACCGCACGCT TGGCATCGGCGCCGGGCAGATGAGCCGTGTGGATTCCGCCCGCATTGCCGTCTGGAAGGCCGGGCAGGCCGGCCTGGATC TGAAGGGCAGCGTTGTGGCGTCCGACGCCATGTTCCCGTTTGCAGACGGCCTCCAGGTGGCGATTGACGCCGGAGCCACC GCCTGCATCCAGCCCGGAGGTTCCATCCGCGACGAGGAAGTGATTGCCGCCGCTGATGCCGCGGGAATTGCCATGGTATT TACGGGACACCGCCATTTCCTCCATTAA
Upstream 100 bases:
>100_bases TTCACGCGGCAGTAGTATGTAGGGAAAGGAACCGCATTTATCGCGTTCTCTCCCGGAGGGGAGGGGGGCGCCCGCGGGTA CATTACAGATATTTGATCTT
Downstream 100 bases:
>100_bases TTTGAATGTTCGTCCCCGCCCCTTTGTCTTAAAACCGATATGCTGCTAGGTGTAAATATAGACCACATCGCCACGTTGAG GCAGGCCCGCTACGCGACCA
Product: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MAIQRALISVSDKTGLEEFAKGLHEFGVELISTGGTAAFLKGLGLPVIEISDYTGEPELFEGRLKTLHPMVHGGLLHRRD NEEHVRQAKENGIKPIDLVCVNLYPFEETVARPGVTLEEAIEKIDIGGPSMLRSAAKNYASVTVVSDPADYARILDEMQT HKGDTTLKTRENLAVKVFMRTSNYDNAITNYLGHQSAESTKGSFCICAPLYQELRYGDNPHQEASLYGSFGDIFHQLQGK ELSYTNVLDIEGAAELITQFRRPTVGILKHTNPCGVGQDDEDLRNAWQKAFETDTQAPFGGVIVVNRPMTEGLARVLSAI FTDVIIAPEYDAEARAILQKKKNCRIIRMNTEAWMKARREPIIRSAPGGFMTMKRDTDVMGLDNLEAKVVTKRPPTEEEL TAMRFNWRVVKQVHSNAIVFGGTDRTLGIGAGQMSRVDSARIAVWKAGQAGLDLKGSVVASDAMFPFADGLQVAIDAGAT ACIQPGGSIRDEEVIAAADAAGIAMVFTGHRHFLH
Sequences:
>Translated_515_residues MAIQRALISVSDKTGLEEFAKGLHEFGVELISTGGTAAFLKGLGLPVIEISDYTGEPELFEGRLKTLHPMVHGGLLHRRD NEEHVRQAKENGIKPIDLVCVNLYPFEETVARPGVTLEEAIEKIDIGGPSMLRSAAKNYASVTVVSDPADYARILDEMQT HKGDTTLKTRENLAVKVFMRTSNYDNAITNYLGHQSAESTKGSFCICAPLYQELRYGDNPHQEASLYGSFGDIFHQLQGK ELSYTNVLDIEGAAELITQFRRPTVGILKHTNPCGVGQDDEDLRNAWQKAFETDTQAPFGGVIVVNRPMTEGLARVLSAI FTDVIIAPEYDAEARAILQKKKNCRIIRMNTEAWMKARREPIIRSAPGGFMTMKRDTDVMGLDNLEAKVVTKRPPTEEEL TAMRFNWRVVKQVHSNAIVFGGTDRTLGIGAGQMSRVDSARIAVWKAGQAGLDLKGSVVASDAMFPFADGLQVAIDAGAT ACIQPGGSIRDEEVIAAADAAGIAMVFTGHRHFLH >Mature_514_residues AIQRALISVSDKTGLEEFAKGLHEFGVELISTGGTAAFLKGLGLPVIEISDYTGEPELFEGRLKTLHPMVHGGLLHRRDN EEHVRQAKENGIKPIDLVCVNLYPFEETVARPGVTLEEAIEKIDIGGPSMLRSAAKNYASVTVVSDPADYARILDEMQTH KGDTTLKTRENLAVKVFMRTSNYDNAITNYLGHQSAESTKGSFCICAPLYQELRYGDNPHQEASLYGSFGDIFHQLQGKE LSYTNVLDIEGAAELITQFRRPTVGILKHTNPCGVGQDDEDLRNAWQKAFETDTQAPFGGVIVVNRPMTEGLARVLSAIF TDVIIAPEYDAEARAILQKKKNCRIIRMNTEAWMKARREPIIRSAPGGFMTMKRDTDVMGLDNLEAKVVTKRPPTEEELT AMRFNWRVVKQVHSNAIVFGGTDRTLGIGAGQMSRVDSARIAVWKAGQAGLDLKGSVVASDAMFPFADGLQVAIDAGATA CIQPGGSIRDEEVIAAADAAGIAMVFTGHRHFLH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=470, Percent_Identity=37.2340425531915, Blast_Score=259, Evalue=6e-69, Organism=Escherichia coli, GI1790439, Length=533, Percent_Identity=47.8424015009381, Blast_Score=458, Evalue=1e-130, Organism=Caenorhabditis elegans, GI71985564, Length=472, Percent_Identity=31.7796610169492, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI71985574, Length=328, Percent_Identity=22.8658536585366, Blast_Score=78, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6323768, Length=467, Percent_Identity=35.3319057815846, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6323056, Length=466, Percent_Identity=34.3347639484979, Blast_Score=240, Evalue=5e-64, Organism=Drosophila melanogaster, GI24649832, Length=469, Percent_Identity=35.8208955223881, Blast_Score=251, Evalue=7e-67,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 56358; Mature: 56227
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQRALISVSDKTGLEEFAKGLHEFGVELISTGGTAAFLKGLGLPVIEISDYTGEPELF CCCHHHHHHCCCCCCHHHHHHHHHHHCHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHH EGRLKTLHPMVHGGLLHRRDNEEHVRQAKENGIKPIDLVCVNLYPFEETVARPGVTLEEA HHHHHHHHHHHHCCHHCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHCCCCCCHHHH IEKIDIGGPSMLRSAAKNYASVTVVSDPADYARILDEMQTHKGDTTLKTRENLAVKVFMR HHHHCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEEE TSNYDNAITNYLGHQSAESTKGSFCICAPLYQELRYGDNPHQEASLYGSFGDIFHQLQGK CCCCCHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCC ELSYTNVLDIEGAAELITQFRRPTVGILKHTNPCGVGQDDEDLRNAWQKAFETDTQAPFG CCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC GVIVVNRPMTEGLARVLSAIFTDVIIAPEYDAEARAILQKKKNCRIIRMNTEAWMKARRE CEEEECCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHCC PIIRSAPGGFMTMKRDTDVMGLDNLEAKVVTKRPPTEEELTAMRFNWRVVKQVHSNAIVF CCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEE GGTDRTLGIGAGQMSRVDSARIAVWKAGQAGLDLKGSVVASDAMFPFADGLQVAIDAGAT CCCCCEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCE ACIQPGGSIRDEEVIAAADAAGIAMVFTGHRHFLH EEECCCCCCCCCCEEEECCCCCEEEEEECCHHCCC >Mature Secondary Structure AIQRALISVSDKTGLEEFAKGLHEFGVELISTGGTAAFLKGLGLPVIEISDYTGEPELF CCHHHHHHCCCCCCHHHHHHHHHHHCHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHH EGRLKTLHPMVHGGLLHRRDNEEHVRQAKENGIKPIDLVCVNLYPFEETVARPGVTLEEA HHHHHHHHHHHHCCHHCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHCCCCCCHHHH IEKIDIGGPSMLRSAAKNYASVTVVSDPADYARILDEMQTHKGDTTLKTRENLAVKVFMR HHHHCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEEE TSNYDNAITNYLGHQSAESTKGSFCICAPLYQELRYGDNPHQEASLYGSFGDIFHQLQGK CCCCCHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCC ELSYTNVLDIEGAAELITQFRRPTVGILKHTNPCGVGQDDEDLRNAWQKAFETDTQAPFG CCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC GVIVVNRPMTEGLARVLSAIFTDVIIAPEYDAEARAILQKKKNCRIIRMNTEAWMKARRE CEEEECCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHCC PIIRSAPGGFMTMKRDTDVMGLDNLEAKVVTKRPPTEEELTAMRFNWRVVKQVHSNAIVF CCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEE GGTDRTLGIGAGQMSRVDSARIAVWKAGQAGLDLKGSVVASDAMFPFADGLQVAIDAGAT CCCCCEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCE ACIQPGGSIRDEEVIAAADAAGIAMVFTGHRHFLH EEECCCCCCCCCCEEEECCCCCEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA