Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735696
Identifier: 187735696
GI number: 187735696
Start: 1438464
End: 1438829
Strand: Reverse
Name: 187735696
Synonym: Amuc_1202
Alternate gene names: NA
Gene position: 1438829-1438464 (Counterclockwise)
Preceding gene: 187735697
Following gene: 187735694
Centisome position: 54.01
GC content: 62.02
Gene sequence:
>366_bases GTGAAATTTTCCCTCTTTCTCCCGGCCCTGTTCCTGCTGGCGGCATCCTGCTCCATGCAGCCCACTCCCGCCCGCCTCTC CGGCTCCTGGATCCAGCCCGTCCCCGGGCAGCCCGGGCATGTGCAGGGAATGCAGCTCCTGCCGGACGGCAGGGCCGTTT CCATCAACATGCACACGCTTCTCTACCAAGGTTGGCAGCTGGACGGCAGCCGCCTGATCCTGACGGGGAAAAGCATGGGA AACGGCAACTCCTCCCTCTTCACCGCTACCTCCACCATTGACAGTCTCAGCAGAAACACGCTGATTCTGAACACGGACGG AACCCGGGAGATTTACACCCGCATGACGGACGCTGACGGGAGATAG
Upstream 100 bases:
>100_bases TTCATTGACGGACGCCTTCCCCACACCCTGCTGCTGGAAATTTTCACTCCGGACGGCATCGGCACGGAAATCATCCGGGA ACAACGCTGACTCCCCCGCC
Downstream 100 bases:
>100_bases TCTCCCCGCCTGCCGTCATTCATCATCCAGCAGGGACTTGTTGGCTGCTTTCGCCAGCTCGCAATTCGGGCATTTGTCAA TCAGGCGGTCCATCAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKFSLFLPALFLLAASCSMQPTPARLSGSWIQPVPGQPGHVQGMQLLPDGRAVSINMHTLLYQGWQLDGSRLILTGKSMG NGNSSLFTATSTIDSLSRNTLILNTDGTREIYTRMTDADGR
Sequences:
>Translated_121_residues MKFSLFLPALFLLAASCSMQPTPARLSGSWIQPVPGQPGHVQGMQLLPDGRAVSINMHTLLYQGWQLDGSRLILTGKSMG NGNSSLFTATSTIDSLSRNTLILNTDGTREIYTRMTDADGR >Mature_121_residues MKFSLFLPALFLLAASCSMQPTPARLSGSWIQPVPGQPGHVQGMQLLPDGRAVSINMHTLLYQGWQLDGSRLILTGKSMG NGNSSLFTATSTIDSLSRNTLILNTDGTREIYTRMTDADGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13113; Mature: 13113
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSLFLPALFLLAASCSMQPTPARLSGSWIQPVPGQPGHVQGMQLLPDGRAVSINMHTL CCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEHEE LYQGWQLDGSRLILTGKSMGNGNSSLFTATSTIDSLSRNTLILNTDGTREIYTRMTDADG EEECEEECCCEEEEEECCCCCCCCEEEEEECCHHHCCCCEEEEECCCCCEEEEEECCCCC R C >Mature Secondary Structure MKFSLFLPALFLLAASCSMQPTPARLSGSWIQPVPGQPGHVQGMQLLPDGRAVSINMHTL CCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEHEE LYQGWQLDGSRLILTGKSMGNGNSSLFTATSTIDSLSRNTLILNTDGTREIYTRMTDADG EEECEEECCCEEEEEECCCCCCCCEEEEEECCHHHCCCCEEEEECCCCCEEEEEECCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA