Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735694

Identifier: 187735694

GI number: 187735694

Start: 1436788

End: 1437831

Strand: Reverse

Name: 187735694

Synonym: Amuc_1200

Alternate gene names: NA

Gene position: 1437831-1436788 (Counterclockwise)

Preceding gene: 187735696

Following gene: 187735693

Centisome position: 53.97

GC content: 61.11

Gene sequence:

>1044_bases
ATGCATATGGCGGACGGCTTCATCTCACCGGCGGTAGGCTGCACCATGTGGGCGGCTTCCGCTGCAATTACAACGCTCTG
CACACGTAAGGTCAGGCAGGAAAAAGAAATGCGGCTCGTCCCGCTCATGGGCGTGCTGGGAGCCTTCATCTTTGCCTGCC
AGATGCTGAATTTCACCATTCCGGGCACCGGCTCCAGCGGCCATCTGGGCGGCGGCCTCATCCTGGCGGTCCTTCTGGGG
CCGTATGCGGGGTTCCTGGTCATGGCGGCCATCCTGACGGTGCAGGCCCTTTTCTTTGCGGATGGGGGGCTGCTGGCCCT
GGGCTGCAATATTTTCAATATGGGGTTTTTCTCCTGCCTGGTAGCTTACCCTTTCATTTACAGGCCCCTGGCCGGAACAA
AAACCGGCACGGGCCGCATCACGCTGGCCAGCGTCATCGCCGCCGTCATCGGGCTCCAGATGGGGGCTTTCTCCGTCGTT
CTGGAAACAACGGCCTCCGGCATCTCAGCCCTGCCCTTCGCCCAATTTGTTGAATTGATGCTGCCCATTCATCTGGCCAT
CGGCGCCGTAGAAGGCCTTGCTACGGCAGCCGTCGTCATCTTCATCAGCAAGGCACAGCCGTCCCTGCTGCGCCCGGCCG
ACTTGGAAACCGGAACCGTCAAAAAAGCATCCTGGACCGTTTTGGGCATCTTTGCGGTAGCGGCCCTGCTCTGCGGAGCC
GCCCTCTCCTGGTTCGCCTCCGCCTATCCTGACGGACTGGAATGGTCTGTAGCCGGAGTCACCGGGTCGGAAGAAACCAG
GCTGGCGGAACCGTCCCCCCTCCACCGGAACCTGGAAACCGTACAGGAGGCCACCGCCATTATGCCGGACTACGCCTTTC
CCGCTGATGACGGGGCAAACACCGCAGAAACGGAAGCTTCCTCCTCCATTGTCAACCCTGAAACGAGCATGGCCGGCGTG
CTGGGAAGCGCCATTATTGCAGCCCTTATTTTTGCGGCCGGTTTCCTGTTCGGCAGAAAACCGCACAGCCACTGCCCCCG
CTGA

Upstream 100 bases:

>100_bases
TTCTTCGGCTTTGCGGCGTTTATGCTAAAGTGGTGCCAATCTGCCCGGTACGGGGCTTTCAGCAATACTTCACACTATTC
AATAGAAAGGCATCAACATC

Downstream 100 bases:

>100_bases
CCCTCCCCATGCCACTGTTTACGGACGCCTCGCAGCAATTCCGCCAGATGGATCGGTTTTCCTGCGGAAATACCGGCATC
CACCGTCTGGACGCCCGCAT

Product: cobalamin (vitamin B12) biosynthesis CbiM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MHMADGFISPAVGCTMWAASAAITTLCTRKVRQEKEMRLVPLMGVLGAFIFACQMLNFTIPGTGSSGHLGGGLILAVLLG
PYAGFLVMAAILTVQALFFADGGLLALGCNIFNMGFFSCLVAYPFIYRPLAGTKTGTGRITLASVIAAVIGLQMGAFSVV
LETTASGISALPFAQFVELMLPIHLAIGAVEGLATAAVVIFISKAQPSLLRPADLETGTVKKASWTVLGIFAVAALLCGA
ALSWFASAYPDGLEWSVAGVTGSEETRLAEPSPLHRNLETVQEATAIMPDYAFPADDGANTAETEASSSIVNPETSMAGV
LGSAIIAALIFAAGFLFGRKPHSHCPR

Sequences:

>Translated_347_residues
MHMADGFISPAVGCTMWAASAAITTLCTRKVRQEKEMRLVPLMGVLGAFIFACQMLNFTIPGTGSSGHLGGGLILAVLLG
PYAGFLVMAAILTVQALFFADGGLLALGCNIFNMGFFSCLVAYPFIYRPLAGTKTGTGRITLASVIAAVIGLQMGAFSVV
LETTASGISALPFAQFVELMLPIHLAIGAVEGLATAAVVIFISKAQPSLLRPADLETGTVKKASWTVLGIFAVAALLCGA
ALSWFASAYPDGLEWSVAGVTGSEETRLAEPSPLHRNLETVQEATAIMPDYAFPADDGANTAETEASSSIVNPETSMAGV
LGSAIIAALIFAAGFLFGRKPHSHCPR
>Mature_347_residues
MHMADGFISPAVGCTMWAASAAITTLCTRKVRQEKEMRLVPLMGVLGAFIFACQMLNFTIPGTGSSGHLGGGLILAVLLG
PYAGFLVMAAILTVQALFFADGGLLALGCNIFNMGFFSCLVAYPFIYRPLAGTKTGTGRITLASVIAAVIGLQMGAFSVV
LETTASGISALPFAQFVELMLPIHLAIGAVEGLATAAVVIFISKAQPSLLRPADLETGTVKKASWTVLGIFAVAALLCGA
ALSWFASAYPDGLEWSVAGVTGSEETRLAEPSPLHRNLETVQEATAIMPDYAFPADDGANTAETEASSSIVNPETSMAGV
LGSAIIAALIFAAGFLFGRKPHSHCPR

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 35979; Mature: 35979

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMADGFISPAVGCTMWAASAAITTLCTRKVRQEKEMRLVPLMGVLGAFIFACQMLNFTI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGTGSSGHLGGGLILAVLLGPYAGFLVMAAILTVQALFFADGGLLALGCNIFNMGFFSCL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
VAYPFIYRPLAGTKTGTGRITLASVIAAVIGLQMGAFSVVLETTASGISALPFAQFVELM
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LPIHLAIGAVEGLATAAVVIFISKAQPSLLRPADLETGTVKKASWTVLGIFAVAALLCGA
HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ALSWFASAYPDGLEWSVAGVTGSEETRLAEPSPLHRNLETVQEATAIMPDYAFPADDGAN
HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TAETEASSSIVNPETSMAGVLGSAIIAALIFAAGFLFGRKPHSHCPR
CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHMADGFISPAVGCTMWAASAAITTLCTRKVRQEKEMRLVPLMGVLGAFIFACQMLNFTI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGTGSSGHLGGGLILAVLLGPYAGFLVMAAILTVQALFFADGGLLALGCNIFNMGFFSCL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
VAYPFIYRPLAGTKTGTGRITLASVIAAVIGLQMGAFSVVLETTASGISALPFAQFVELM
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LPIHLAIGAVEGLATAAVVIFISKAQPSLLRPADLETGTVKKASWTVLGIFAVAALLCGA
HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ALSWFASAYPDGLEWSVAGVTGSEETRLAEPSPLHRNLETVQEATAIMPDYAFPADDGAN
HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TAETEASSSIVNPETSMAGVLGSAIIAALIFAAGFLFGRKPHSHCPR
CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]