Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735669
Identifier: 187735669
GI number: 187735669
Start: 1410032
End: 1411084
Strand: Reverse
Name: 187735669
Synonym: Amuc_1175
Alternate gene names: NA
Gene position: 1411084-1410032 (Counterclockwise)
Preceding gene: 187735677
Following gene: 187735664
Centisome position: 52.97
GC content: 55.27
Gene sequence:
>1053_bases ATGAATAAATCTCCCAAAACCGCCTTCTCCCTGCTCATTCCCGCCGTCATCTTCGTCGCTGTGGGCGCCGCCATTTTTGC CTTCCAGAATTTCAGCAACAAGCGCGTATTGTCCGGCTTTGCCGGATATGTCTATTCCAAACCCATTTTCGGACAGAACA GGTTTGAAGGCATCCTGATCGGGCCGTCCTCCACGGGATGGGCGTGGAGAAAGGAAGTCAGCAAGGTTTCCATCACGCCG GATACCACGGTGGAAGAATTCGACGCCCGCAATGGAGGGGCTATTCTGGGCAAGGACAAGCTCCCCATCTCCTGCAAAGC TTCTCTGGTTTACCGGCTGGACCCGTCCCGGGTAAAGGAATTCATGGAAGATTACGGAGGCATCGCCCAAAGCTCCGGCC GCAATGATGACGAAGTGGCGGACGAAATCATGCTCTTTGCCTACAAAAATTTCATTCAGCAGCCTTTCCGTACAGCCGTG CGGGCGGAATTAAGCCAGTACAATGCCCTGGACGCCTCCGGCAGCCTGCAAAAAATTTCCGACAACGTTTACACGCAGTT AAGCAAGCGGCTGGACGGCACCCCCTTTATTGTGGATTCCGTAGCCGTGGGGGAAACAAATCCCCCGCAGGCCATCATTG AATCCGTCGTCAGAAAAGTTCAGACGACTCAGGAAAACGAACGCAAGGAAACGGAACTTCAAATCGCCCGGAAAGACATC GCCATCCAGCGTGCACGCGGGGAGGCGGAAGGCGCCATGAAAATGGAAATAGCGCGCCAGGAAGTAAACGCTAACCTGGC CCGGGGAGAAGCGGAGGCCAAAGTCATTGTCATGCGGGGCAAGGCCCAGGCGGAAGCAGCCCTGGAAGCAGCCCGGGCGG AAGCGGAAGGACTGGCATTGAAGGAAAAGGCCATGGGACCGAACATGCTCCGCGCCAAGGCCTTTGAAAACATGCTGAAC AATGCGAAGGTCTATCTCCCCTCCGGAAAAGATGCGGAAGGCAACATGTCTGTACTGGGTATCCTGAACCTGGACAAGGA ACCCGCCAAATAA
Upstream 100 bases:
>100_bases TTTCTTCAGTAGAATACTTTTCCCGGCCGCACAGGAAAAGATAACTTGATTTTCACCAGCCTCATCTTATGTTGGATACC GTCACAACCGCTGCCCTGTC
Downstream 100 bases:
>100_bases ACTCACCTGTTCCCGGCCCGCCGGAAAGGCGGCAGCATCACGAGGCCGCAGGCCCGGAAGGGGAAAAGCTGCCGACCTCT TCCTCCCCGGCAAATTCATG
Product: band 7 protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MNKSPKTAFSLLIPAVIFVAVGAAIFAFQNFSNKRVLSGFAGYVYSKPIFGQNRFEGILIGPSSTGWAWRKEVSKVSITP DTTVEEFDARNGGAILGKDKLPISCKASLVYRLDPSRVKEFMEDYGGIAQSSGRNDDEVADEIMLFAYKNFIQQPFRTAV RAELSQYNALDASGSLQKISDNVYTQLSKRLDGTPFIVDSVAVGETNPPQAIIESVVRKVQTTQENERKETELQIARKDI AIQRARGEAEGAMKMEIARQEVNANLARGEAEAKVIVMRGKAQAEAALEAARAEAEGLALKEKAMGPNMLRAKAFENMLN NAKVYLPSGKDAEGNMSVLGILNLDKEPAK
Sequences:
>Translated_350_residues MNKSPKTAFSLLIPAVIFVAVGAAIFAFQNFSNKRVLSGFAGYVYSKPIFGQNRFEGILIGPSSTGWAWRKEVSKVSITP DTTVEEFDARNGGAILGKDKLPISCKASLVYRLDPSRVKEFMEDYGGIAQSSGRNDDEVADEIMLFAYKNFIQQPFRTAV RAELSQYNALDASGSLQKISDNVYTQLSKRLDGTPFIVDSVAVGETNPPQAIIESVVRKVQTTQENERKETELQIARKDI AIQRARGEAEGAMKMEIARQEVNANLARGEAEAKVIVMRGKAQAEAALEAARAEAEGLALKEKAMGPNMLRAKAFENMLN NAKVYLPSGKDAEGNMSVLGILNLDKEPAK >Mature_350_residues MNKSPKTAFSLLIPAVIFVAVGAAIFAFQNFSNKRVLSGFAGYVYSKPIFGQNRFEGILIGPSSTGWAWRKEVSKVSITP DTTVEEFDARNGGAILGKDKLPISCKASLVYRLDPSRVKEFMEDYGGIAQSSGRNDDEVADEIMLFAYKNFIQQPFRTAV RAELSQYNALDASGSLQKISDNVYTQLSKRLDGTPFIVDSVAVGETNPPQAIIESVVRKVQTTQENERKETELQIARKDI AIQRARGEAEGAMKMEIARQEVNANLARGEAEAKVIVMRGKAQAEAALEAARAEAEGLALKEKAMGPNMLRAKAFENMLN NAKVYLPSGKDAEGNMSVLGILNLDKEPAK
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38234; Mature: 38234
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSPKTAFSLLIPAVIFVAVGAAIFAFQNFSNKRVLSGFAGYVYSKPIFGQNRFEGILI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEE GPSSTGWAWRKEVSKVSITPDTTVEEFDARNGGAILGKDKLPISCKASLVYRLDPSRVKE CCCCCCCHHHHHCCEEECCCCCCHHHHCCCCCCEEEECCCCCCEEEEEEEEEECHHHHHH FMEDYGGIAQSSGRNDDEVADEIMLFAYKNFIQQPFRTAVRAELSQYNALDASGSLQKIS HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DNVYTQLSKRLDGTPFIVDSVAVGETNPPQAIIESVVRKVQTTQENERKETELQIARKDI HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIQRARGEAEGAMKMEIARQEVNANLARGEAEAKVIVMRGKAQAEAALEAARAEAEGLAL HHHHHCCCCCCHHHHHHHHHHHCCHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCH KEKAMGPNMLRAKAFENMLNNAKVYLPSGKDAEGNMSVLGILNLDKEPAK HHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MNKSPKTAFSLLIPAVIFVAVGAAIFAFQNFSNKRVLSGFAGYVYSKPIFGQNRFEGILI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEE GPSSTGWAWRKEVSKVSITPDTTVEEFDARNGGAILGKDKLPISCKASLVYRLDPSRVKE CCCCCCCHHHHHCCEEECCCCCCHHHHCCCCCCEEEECCCCCCEEEEEEEEEECHHHHHH FMEDYGGIAQSSGRNDDEVADEIMLFAYKNFIQQPFRTAVRAELSQYNALDASGSLQKIS HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DNVYTQLSKRLDGTPFIVDSVAVGETNPPQAIIESVVRKVQTTQENERKETELQIARKDI HHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIQRARGEAEGAMKMEIARQEVNANLARGEAEAKVIVMRGKAQAEAALEAARAEAEGLAL HHHHHCCCCCCHHHHHHHHHHHCCHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCH KEKAMGPNMLRAKAFENMLNNAKVYLPSGKDAEGNMSVLGILNLDKEPAK HHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA