Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is yeaC [H]
Identifier: 187735664
GI number: 187735664
Start: 1405417
End: 1406442
Strand: Reverse
Name: yeaC [H]
Synonym: Amuc_1170
Alternate gene names: 187735664
Gene position: 1406442-1405417 (Counterclockwise)
Preceding gene: 187735669
Following gene: 187735663
Centisome position: 52.79
GC content: 60.04
Gene sequence:
>1026_bases ATGAATACCCCCCCTATCCTCTCTCAGGAAGAACTTGGCTGCGCCATGCAAAAGCTCCGTGCTCTGGCTGCCGCCATGAA CCAGGTCCTGTTCGGTCAAAAGGATCTCATTGAACTGGTTCTCATTGGCGTACTGGCTCGCGGGCATATCCTGCTGGAGG GCCTGCCCGGCCTGGGCAAGACGGAACTGGTCAAAGGCCTCTCCAGGGCACTGGATATCACAGCGCGCCGCGTCCAATTC ACACCCGATCTACTGCCGGGAGACATCACGGGAACCCCGGTTCTTCAGGAAAGGGACGGAACAAAAAACTTCATCTTCCA GGAAGGGCCCGTCTTCGCCAACATCATGCTGGCGGATGAAATCAACCGCGCCTCCCCCAAGACCCAGTCCGCCCTGCTGG AAGCCATGCAGGAACGCCGCGTCACCGTCATGGGAGAGACCCATGCCCTCCCCTCCCCCTTTTTCGTGCTTGCCACCCAG AACCCCATTGAACTGGAAGGAACCTTTCCCCTGCCGGAAGCCCAGCTGGACCGCTTCCTTTTCAAAATCAACGTCAACCG CACACCGGCGGATGTGCTGGCCCGCATTGTCCTCAACCGGGAAATGGGCGTGGAACCTGAAATATCCCCGGTTTTGAACG CGCAGGAATTGCAGGAACTCATGCAAATGGCCCGGAATGTAGCCATTCCCGAAGTGGTGGCGGACTATATAGGCAGGCTG GTCAACGCTACGCATCCCGGAGAATCGGAAGCCTCCGGAGGCGTTAAATACGGGGCCAGTCCCCGGGCGGCCCTGGGCCT GGCGGCTGCCGCTAAAGCCCGAGCTTTGCGCCACGGGCGCGCTTTCTGCTCCTTTGAGGATGTGCAGGCCGTTATTCATC CCGTGCTGGAGCACCGCATCCTGCTCAACCACACGGCCCGTCTGGACGGACAGACACCCGCCGCAGTCATCAACCGCCTG GTCAGGGAAATCCCTGCCCAGAACAAGCCCCTGCCGGATTCCCTGGCCGCCGCAAAAATTCATTGA
Upstream 100 bases:
>100_bases TCCGCTTGCAGCCCCTCTGGATGCATGGCATAAGTTCATGAAGAAATCTAACAAATGCCCGGTCTTTTTCCCAAAAGCCG CGGAAATCCGGCAGTTTCCC
Downstream 100 bases:
>100_bases CCACACCTCCTCAGCCCTTCCCCCATGCGCCGCCCTCTCTCCCGTTCATGGCTGTTCTTCAGCCTCTTCCTTCTTTCGGC ATTCAATATTCTCCCGCTCC
Product: ATPase associated with various cellular activities AAA_3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MNTPPILSQEELGCAMQKLRALAAAMNQVLFGQKDLIELVLIGVLARGHILLEGLPGLGKTELVKGLSRALDITARRVQF TPDLLPGDITGTPVLQERDGTKNFIFQEGPVFANIMLADEINRASPKTQSALLEAMQERRVTVMGETHALPSPFFVLATQ NPIELEGTFPLPEAQLDRFLFKINVNRTPADVLARIVLNREMGVEPEISPVLNAQELQELMQMARNVAIPEVVADYIGRL VNATHPGESEASGGVKYGASPRAALGLAAAAKARALRHGRAFCSFEDVQAVIHPVLEHRILLNHTARLDGQTPAAVINRL VREIPAQNKPLPDSLAAAKIH
Sequences:
>Translated_341_residues MNTPPILSQEELGCAMQKLRALAAAMNQVLFGQKDLIELVLIGVLARGHILLEGLPGLGKTELVKGLSRALDITARRVQF TPDLLPGDITGTPVLQERDGTKNFIFQEGPVFANIMLADEINRASPKTQSALLEAMQERRVTVMGETHALPSPFFVLATQ NPIELEGTFPLPEAQLDRFLFKINVNRTPADVLARIVLNREMGVEPEISPVLNAQELQELMQMARNVAIPEVVADYIGRL VNATHPGESEASGGVKYGASPRAALGLAAAAKARALRHGRAFCSFEDVQAVIHPVLEHRILLNHTARLDGQTPAAVINRL VREIPAQNKPLPDSLAAAKIH >Mature_341_residues MNTPPILSQEELGCAMQKLRALAAAMNQVLFGQKDLIELVLIGVLARGHILLEGLPGLGKTELVKGLSRALDITARRVQF TPDLLPGDITGTPVLQERDGTKNFIFQEGPVFANIMLADEINRASPKTQSALLEAMQERRVTVMGETHALPSPFFVLATQ NPIELEGTFPLPEAQLDRFLFKINVNRTPADVLARIVLNREMGVEPEISPVLNAQELQELMQMARNVAIPEVVADYIGRL VNATHPGESEASGGVKYGASPRAALGLAAAAKARALRHGRAFCSFEDVQAVIHPVLEHRILLNHTARLDGQTPAAVINRL VREIPAQNKPLPDSLAAAKIH
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 37021; Mature: 37021
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPPILSQEELGCAMQKLRALAAAMNQVLFGQKDLIELVLIGVLARGHILLEGLPGLGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCH TELVKGLSRALDITARRVQFTPDLLPGDITGTPVLQERDGTKNFIFQEGPVFANIMLADE HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEECCCCCCCCEEECCCCEEEEEEHHH INRASPKTQSALLEAMQERRVTVMGETHALPSPFFVLATQNPIELEGTFPLPEAQLDRFL CCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHEE FKINVNRTPADVLARIVLNREMGVEPEISPVLNAQELQELMQMARNVAIPEVVADYIGRL EEEECCCCHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH VNATHPGESEASGGVKYGASPRAALGLAAAAKARALRHGRAFCSFEDVQAVIHPVLEHRI HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLNHTARLDGQTPAAVINRLVREIPAQNKPLPDSLAAAKIH HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MNTPPILSQEELGCAMQKLRALAAAMNQVLFGQKDLIELVLIGVLARGHILLEGLPGLGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCH TELVKGLSRALDITARRVQFTPDLLPGDITGTPVLQERDGTKNFIFQEGPVFANIMLADE HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEECCCCCCCCEEECCCCEEEEEEHHH INRASPKTQSALLEAMQERRVTVMGETHALPSPFFVLATQNPIELEGTFPLPEAQLDRFL CCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHEE FKINVNRTPADVLARIVLNREMGVEPEISPVLNAQELQELMQMARNVAIPEVVADYIGRL EEEECCCCHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH VNATHPGESEASGGVKYGASPRAALGLAAAAKARALRHGRAFCSFEDVQAVIHPVLEHRI HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLNHTARLDGQTPAAVINRLVREIPAQNKPLPDSLAAAKIH HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]