Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735677
Identifier: 187735677
GI number: 187735677
Start: 1418300
End: 1418668
Strand: Reverse
Name: 187735677
Synonym: Amuc_1183
Alternate gene names: NA
Gene position: 1418668-1418300 (Counterclockwise)
Preceding gene: 187735678
Following gene: 187735669
Centisome position: 53.25
GC content: 54.2
Gene sequence:
>369_bases ATGCTCTGGAGACGCCGCTACTACCACCGTTTTACCCTGGCGGAGCTTGAAATCCGCCGGGAGAAACGTGCCCTGATCGT CCAGAGAGCCCTGCGCCTCTTTGCCATTGTCCTGGCCCTGTGCCTGACGATGCTGCTTTCCCTGGTGTGTTTCAAACCAT GGAAGGATCTGCGCTCCCTGGAGCATGAACGTTCCTTCCTTCAGGCTCATCTGGAAAAATCCAGGGAGCAGATGGAACAG GCAAAAAACGAATTCATCTGGATCTCACAGGATCCCCACTACTTTGAAATGATTGCCCGGGACAAAGGCAACCTAGCCCT TCCCGGAGAGCACATTCTCCGCATTACGGAACCCAAGCGCCTGAAATAA
Upstream 100 bases:
>100_bases AATCAATTGCTTAGAATTGAAGAAGAACTGGGAAATGACGCAGTTTATGGTGGTAAAATTCATATTCTATGATCAAAAAT ATGTTGTTTGACTGCAAGGA
Downstream 100 bases:
>100_bases AGCGTTTTTCAGCGGGAAAAGAAAACCATGCACGCGGTTTCTCCCCCTCTCCCGCCGTAGTAATAGGTTCCCAAACGCTG GCATGCAGGACGGAATACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MLWRRRYYHRFTLAELEIRREKRALIVQRALRLFAIVLALCLTMLLSLVCFKPWKDLRSLEHERSFLQAHLEKSREQMEQ AKNEFIWISQDPHYFEMIARDKGNLALPGEHILRITEPKRLK
Sequences:
>Translated_122_residues MLWRRRYYHRFTLAELEIRREKRALIVQRALRLFAIVLALCLTMLLSLVCFKPWKDLRSLEHERSFLQAHLEKSREQMEQ AKNEFIWISQDPHYFEMIARDKGNLALPGEHILRITEPKRLK >Mature_122_residues MLWRRRYYHRFTLAELEIRREKRALIVQRALRLFAIVLALCLTMLLSLVCFKPWKDLRSLEHERSFLQAHLEKSREQMEQ AKNEFIWISQDPHYFEMIARDKGNLALPGEHILRITEPKRLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14845; Mature: 14845
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWRRRYYHRFTLAELEIRREKRALIVQRALRLFAIVLALCLTMLLSLVCFKPWKDLRSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EHERSFLQAHLEKSREQMEQAKNEFIWISQDPHYFEMIARDKGNLALPGEHILRITEPKR HHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHCCCCCEECCHHHHEEECCCCC LK CC >Mature Secondary Structure MLWRRRYYHRFTLAELEIRREKRALIVQRALRLFAIVLALCLTMLLSLVCFKPWKDLRSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EHERSFLQAHLEKSREQMEQAKNEFIWISQDPHYFEMIARDKGNLALPGEHILRITEPKR HHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHCCCCCEECCHHHHEEECCCCC LK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA