Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735663
Identifier: 187735663
GI number: 187735663
Start: 1403809
End: 1405392
Strand: Reverse
Name: 187735663
Synonym: Amuc_1169
Alternate gene names: NA
Gene position: 1405392-1403809 (Counterclockwise)
Preceding gene: 187735664
Following gene: 187735662
Centisome position: 52.75
GC content: 58.96
Gene sequence:
>1584_bases ATGCGCCGCCCTCTCTCCCGTTCATGGCTGTTCTTCAGCCTCTTCCTTCTTTCGGCATTCAATATTCTCCCGCTCCACGC AAAACCGGCCGCCGCTCCCCCCATCGCCGTTTCCGTGGAGAAAGCATTTGACTACAGCGCGAACAACGCCCGCGTCCCTC TCCGGGTGAAGCTGGAAAACACCACCGGCTCGGACAGAAAAGCCACTCTTCAATTCCATGAAGGGTGGAACGGAAACAGG GGAACCAGCCATACTTATCCGTTCTTCATTCCGGCCCGGGAAAGCGTTCATGCAGTCGTTTACCCTCTCCTCTCCTACAA TCTCGTCTACGAAGTGAAGGAAAACCATGAAGGAGCTTCCCCCATTCCCACGGATACGGAGCACAGGAAAATGGTCGCGG TTATCCAGGAAGGCGCTCCGGCGGACTGGCACCTGCTTTCCGAATCTTCCTATAACGCGGCCGTTTCCTCCTGCGACCTG ATGAAATGGCCAGCCGACTACCGGATGTACGAGGGGCAGACCTGCCTCATCATCCCGGAAAAAACCTACCGTACCCATTT TGACGAAGCCCACCGCAAAGCCATCCGCCAATGGGTGACGGGAGGGGGAAACCTGTGGCTCATCGGTGACAGGGGGCTTT CCGTTTCCACCCGGTTGCTGGGAAACGGGCGCATTCTGCACGTTCCGTCCCTGGACGGCCTGCCGGAAGAAGAAAAAAAG TTGAAACTGAAGGAATTCATCAACCTCCACGAAAAGGGAAACTGTTACCCGGAGATTACCTCCGCCGCTCCCTATTATTT CTCAGCCCCATCCACCACGCTGGGGCTGGGGCTGATCATCTTTGCCGTGCTTGTCGGCCCGCTGAGCCTGTTCCTGTGGG CTCCCGCAGGCAAAAGGCAAAGGCTGTTCCTGCTGATCCCGGCCATTTCCGTGGGATTTTCCCTTCTTCTGCTGCTCCTG ATTCTGGCCGGAGACGGCACGGGAGGGACGGGCAGCCGGGAAGTTCTTATCCAGGTTAATCCGCAGGACCACTCCGCCCT GATCTCCCAAAACCAGATTTGCAAGACCTCCGTCCTGCTGAACAATACATTTCAATTGCCGGAAAACGCCGGCATCACCG GAGCACGCATGAGCAAGGCGCGCGGCTCCATTAAGGAAAAACCCATAGAAGGCGCGGCGCGGCAAGGGGAAGAATGCGGG GGAAAATGGTTCACCAGCCGCTCCACGCTCCAGCACCGGATCATCATGCCGGTTTCCACACGGGCGGCGCTCACTCTGCT GGAGACGCGCCCCGGCGGGGCGCCCGTATTCCAAAGCACCTTTCCCGGAACCCTGAACGGACTCACCTACCGGGACGCCT CCGGAAAATACTGGATTCTTGAACAACTGCCTCCCGGCCGTAAAATGCAGGCATCCCCGTTCCTGCCGGAAGAAGAACCG GACGGCCCTCCCCCGCTGCACTTCCGGGCATCCATGGAACCGGCGGGCGGGGAACTGGGCCCCATCCCCACCCTGCCTTC CATTAACTGGGAAAAAACCTCCGTCACCGTCTCCGGCCCCGTCACTCCCCTGCCGCACGAATAA
Upstream 100 bases:
>100_bases CAACCGCCTGGTCAGGGAAATCCCTGCCCAGAACAAGCCCCTGCCGGATTCCCTGGCCGCCGCAAAAATTCATTGACCAC ACCTCCTCAGCCCTTCCCCC
Downstream 100 bases:
>100_bases CCATGAGTACGCCCCTACTGCTGGAAGTTTCCGGACTGTCCAAATCATTCGGTCCGCTGAAAGCCGTCAACAATGCCTCC TTCGTCATCCGCCAGGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLENTTGSDRKATLQFHEGWNGNR GTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGASPIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDL MKWPADYRMYEGQTCLIIPEKTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQRLFLLIPAISVGFSLLLLLL ILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLLNNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECG GKWFTSRSTLQHRIIMPVSTRAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE
Sequences:
>Translated_527_residues MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLENTTGSDRKATLQFHEGWNGNR GTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGASPIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDL MKWPADYRMYEGQTCLIIPEKTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQRLFLLIPAISVGFSLLLLLL ILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLLNNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECG GKWFTSRSTLQHRIIMPVSTRAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE >Mature_527_residues MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLENTTGSDRKATLQFHEGWNGNR GTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGASPIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDL MKWPADYRMYEGQTCLIIPEKTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQRLFLLIPAISVGFSLLLLLL ILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLLNNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECG GKWFTSRSTLQHRIIMPVSTRAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57895; Mature: 57895
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLEN CCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEEECC TTGSDRKATLQFHEGWNGNRGTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGAS CCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCC PIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDLMKWPADYRMYEGQTCLIIPE CCCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHCCCEEECCCCCEEECCCEEEEECC KTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCCCHHHH LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQ HHHHHHHCHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC RLFLLIPAISVGFSLLLLLLILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLL EEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEE NNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECGGKWFTSRSTLQHRIIMPVST CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCCHHCCCCEECCCCCCCEEEEEEECC RAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP CEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLEN CCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEEECC TTGSDRKATLQFHEGWNGNRGTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGAS CCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCC PIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDLMKWPADYRMYEGQTCLIIPE CCCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHCCCEEECCCCCEEECCCEEEEECC KTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCCCHHHH LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQ HHHHHHHCHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC RLFLLIPAISVGFSLLLLLLILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLL EEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEE NNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECGGKWFTSRSTLQHRIIMPVST CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCCHHCCCCEECCCCCCCEEEEEEECC RAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP CEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA