Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735663

Identifier: 187735663

GI number: 187735663

Start: 1403809

End: 1405392

Strand: Reverse

Name: 187735663

Synonym: Amuc_1169

Alternate gene names: NA

Gene position: 1405392-1403809 (Counterclockwise)

Preceding gene: 187735664

Following gene: 187735662

Centisome position: 52.75

GC content: 58.96

Gene sequence:

>1584_bases
ATGCGCCGCCCTCTCTCCCGTTCATGGCTGTTCTTCAGCCTCTTCCTTCTTTCGGCATTCAATATTCTCCCGCTCCACGC
AAAACCGGCCGCCGCTCCCCCCATCGCCGTTTCCGTGGAGAAAGCATTTGACTACAGCGCGAACAACGCCCGCGTCCCTC
TCCGGGTGAAGCTGGAAAACACCACCGGCTCGGACAGAAAAGCCACTCTTCAATTCCATGAAGGGTGGAACGGAAACAGG
GGAACCAGCCATACTTATCCGTTCTTCATTCCGGCCCGGGAAAGCGTTCATGCAGTCGTTTACCCTCTCCTCTCCTACAA
TCTCGTCTACGAAGTGAAGGAAAACCATGAAGGAGCTTCCCCCATTCCCACGGATACGGAGCACAGGAAAATGGTCGCGG
TTATCCAGGAAGGCGCTCCGGCGGACTGGCACCTGCTTTCCGAATCTTCCTATAACGCGGCCGTTTCCTCCTGCGACCTG
ATGAAATGGCCAGCCGACTACCGGATGTACGAGGGGCAGACCTGCCTCATCATCCCGGAAAAAACCTACCGTACCCATTT
TGACGAAGCCCACCGCAAAGCCATCCGCCAATGGGTGACGGGAGGGGGAAACCTGTGGCTCATCGGTGACAGGGGGCTTT
CCGTTTCCACCCGGTTGCTGGGAAACGGGCGCATTCTGCACGTTCCGTCCCTGGACGGCCTGCCGGAAGAAGAAAAAAAG
TTGAAACTGAAGGAATTCATCAACCTCCACGAAAAGGGAAACTGTTACCCGGAGATTACCTCCGCCGCTCCCTATTATTT
CTCAGCCCCATCCACCACGCTGGGGCTGGGGCTGATCATCTTTGCCGTGCTTGTCGGCCCGCTGAGCCTGTTCCTGTGGG
CTCCCGCAGGCAAAAGGCAAAGGCTGTTCCTGCTGATCCCGGCCATTTCCGTGGGATTTTCCCTTCTTCTGCTGCTCCTG
ATTCTGGCCGGAGACGGCACGGGAGGGACGGGCAGCCGGGAAGTTCTTATCCAGGTTAATCCGCAGGACCACTCCGCCCT
GATCTCCCAAAACCAGATTTGCAAGACCTCCGTCCTGCTGAACAATACATTTCAATTGCCGGAAAACGCCGGCATCACCG
GAGCACGCATGAGCAAGGCGCGCGGCTCCATTAAGGAAAAACCCATAGAAGGCGCGGCGCGGCAAGGGGAAGAATGCGGG
GGAAAATGGTTCACCAGCCGCTCCACGCTCCAGCACCGGATCATCATGCCGGTTTCCACACGGGCGGCGCTCACTCTGCT
GGAGACGCGCCCCGGCGGGGCGCCCGTATTCCAAAGCACCTTTCCCGGAACCCTGAACGGACTCACCTACCGGGACGCCT
CCGGAAAATACTGGATTCTTGAACAACTGCCTCCCGGCCGTAAAATGCAGGCATCCCCGTTCCTGCCGGAAGAAGAACCG
GACGGCCCTCCCCCGCTGCACTTCCGGGCATCCATGGAACCGGCGGGCGGGGAACTGGGCCCCATCCCCACCCTGCCTTC
CATTAACTGGGAAAAAACCTCCGTCACCGTCTCCGGCCCCGTCACTCCCCTGCCGCACGAATAA

Upstream 100 bases:

>100_bases
CAACCGCCTGGTCAGGGAAATCCCTGCCCAGAACAAGCCCCTGCCGGATTCCCTGGCCGCCGCAAAAATTCATTGACCAC
ACCTCCTCAGCCCTTCCCCC

Downstream 100 bases:

>100_bases
CCATGAGTACGCCCCTACTGCTGGAAGTTTCCGGACTGTCCAAATCATTCGGTCCGCTGAAAGCCGTCAACAATGCCTCC
TTCGTCATCCGCCAGGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLENTTGSDRKATLQFHEGWNGNR
GTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGASPIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDL
MKWPADYRMYEGQTCLIIPEKTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK
LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQRLFLLIPAISVGFSLLLLLL
ILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLLNNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECG
GKWFTSRSTLQHRIIMPVSTRAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP
DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE

Sequences:

>Translated_527_residues
MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLENTTGSDRKATLQFHEGWNGNR
GTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGASPIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDL
MKWPADYRMYEGQTCLIIPEKTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK
LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQRLFLLIPAISVGFSLLLLLL
ILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLLNNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECG
GKWFTSRSTLQHRIIMPVSTRAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP
DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE
>Mature_527_residues
MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLENTTGSDRKATLQFHEGWNGNR
GTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGASPIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDL
MKWPADYRMYEGQTCLIIPEKTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK
LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQRLFLLIPAISVGFSLLLLLL
ILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLLNNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECG
GKWFTSRSTLQHRIIMPVSTRAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP
DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57895; Mature: 57895

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLEN
CCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEEECC
TTGSDRKATLQFHEGWNGNRGTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGAS
CCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCC
PIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDLMKWPADYRMYEGQTCLIIPE
CCCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHCCCEEECCCCCEEECCCEEEEECC
KTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCCCHHHH
LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQ
HHHHHHHCHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC
RLFLLIPAISVGFSLLLLLLILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLL
EEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEE
NNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECGGKWFTSRSTLQHRIIMPVST
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCCHHCCCCEECCCCCCCEEEEEEECC
RAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP
CEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MRRPLSRSWLFFSLFLLSAFNILPLHAKPAAAPPIAVSVEKAFDYSANNARVPLRVKLEN
CCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEEECC
TTGSDRKATLQFHEGWNGNRGTSHTYPFFIPARESVHAVVYPLLSYNLVYEVKENHEGAS
CCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEEEEEEECCCCCCC
PIPTDTEHRKMVAVIQEGAPADWHLLSESSYNAAVSSCDLMKWPADYRMYEGQTCLIIPE
CCCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHCCCEEECCCCCEEECCCEEEEECC
KTYRTHFDEAHRKAIRQWVTGGGNLWLIGDRGLSVSTRLLGNGRILHVPSLDGLPEEEKK
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCCCHHHH
LKLKEFINLHEKGNCYPEITSAAPYYFSAPSTTLGLGLIIFAVLVGPLSLFLWAPAGKRQ
HHHHHHHCHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC
RLFLLIPAISVGFSLLLLLLILAGDGTGGTGSREVLIQVNPQDHSALISQNQICKTSVLL
EEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEE
NNTFQLPENAGITGARMSKARGSIKEKPIEGAARQGEECGGKWFTSRSTLQHRIIMPVST
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCCHHCCCCEECCCCCCCEEEEEEECC
RAALTLLETRPGGAPVFQSTFPGTLNGLTYRDASGKYWILEQLPPGRKMQASPFLPEEEP
CEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
DGPPPLHFRASMEPAGGELGPIPTLPSINWEKTSVTVSGPVTPLPHE
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA