Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735658
Identifier: 187735658
GI number: 187735658
Start: 1396118
End: 1398697
Strand: Reverse
Name: 187735658
Synonym: Amuc_1164
Alternate gene names: NA
Gene position: 1398697-1396118 (Counterclockwise)
Preceding gene: 187735659
Following gene: 187735655
Centisome position: 52.5
GC content: 61.09
Gene sequence:
>2580_bases ATGATTCAATTCAACACCCCGGAATGGTTCTTCCTGATCCCCCTGCTTCTGGCGGCAGGCTGGAAATACAGGCGTCTGCG CCTGGCCTCCCCCCTGCGCCTCCTTCTGCAGGCCTGCCTGCTGCTGGCCCTGGCTCAGCCTGCCCTTGACAGGGGCGGCA AAGGCATGGACTTGTGGGTGCTGGTGGACCGATCAAATTCCACGGCGGGAATTCCGGCAGCCGGGGCAGAGGAAATCCAG GCTATTCTGGAACGGCACAAACATGCCGGGGACCGCGTCCGATTGGTGGATTTCGCGCAATCCGCCGTGCTCCGGGGACG CGGAGACCCCGTCTTTGCCGGGGGAACCGCCGGAACGGACATGGAACAGGCCCTGGCCTATACCATGGCCCTGATGTCCC CGAACCGGACGAACCGCATCCTGATGTTGACGGACGGCTGGCCCACCACGCCGCTGGACCAGGCGGCGGAACAGCTCATC CAGTCCCGGATTCCGGTGGACTACCGCCTGTCCGTCACCTTCCGGGAAGCGGACATCCGCATAGAACAAATCCGAACCCC GGCGCGTATCCGGCCCGGCGAAGCCTTTATTTTAGAAGCAACCCTGGCAGGCCCTCCCGGCCCGGCCATCACCGTTCCGT GGCAAATCAGCAAAAACGGAGGGGCTCCGCTGCGGGGGACGGCTACCCTGCTCAACGGCAAAGCCACGGTGCAGCTGGCG GACAGGCTCTCCACACCCGGCTGTTCCGCTTATGAAATGACCATAACGCCGCAAAACGATCCAATCCCTGAAAACAACCG TGCCGTCAGCTTCCTTGAAGTGACGGGAGGAAACGGCGTCCTGCTGCTCTCCGGCTACGACCGCGACCCCCTGGCGCCTT TCCTGGAAGCGCAGGGATTCCGCGTCCAACAACCGTCCGGCCTGAACCAGCTTGATGCCCGCCACCTCTCCGGCGTGGGG CTGGTCATCATCAACAACCTCTCCGCATCCTCCGTCCCGCCGGACTTTCTGCATGCCCTGGACTATTACGTGAGGGAACA GGGCGGCGGCCTGCTCATGTGCGGGGGCAGGCATAGTTTCGGCTCCGGCGGATACTTCTCCTCCCCCATTGACGAACTGC TCCCCGTTTCCATGGAAATGAAGAAGGACAAGATGAAGCTCATGACGGCCATGAGCATCGTTCTGGACCGTTCCGGATCC ATGTCCTGTTCCGTTCCCGGAGGAAAGACGAAAATGGATCTGGCCAATGCCGGAACCTGCCAGACCATTTCCCTGTTGTC CGACCAGGATCTCATCTCCGTCCACGCCGTGGACAGCGAACCGCACCCTATTGTCACGCTAAGCAGTCTGGGCCCTAACC GGAAGAAAATGATATCCAGCGTCTCCAGGATTGCCTCCATGGGCGGAGGAATCTTCATCGGCGCCGGGCTGAAAGCGGGC TGGCAGGAACTGCAACGTTCCGTGGCCGGAACACGGCATCTGCTCCTCTTTGCAGATGCTGACGATTCCGAAGAACCTGC CGACTACCGGGAAACTCTGAAAGAAATGGTTAAGGAAGGGGTTACCGTAAGCGTCATCGCACTGGGAACGGAAAAAAGTG CCGATGCCGGACTGCTCAGGGAAATAGCGGAATTGGGACGGGGGCGCATCTTCTTCTGCGACCGTCCGGGGGATATCCCC AGCATCTTTGCACAGGAAACCGTCAGTGTGGCCCGGGCCGCCTTCATCAGGGAACGTACCCTCCTGCGCGGCACGGCTGG CTGGCTTCAAATTGCAGCCGGCCAGCCGGAATGGCCCCCTGCCGTAGACGGTTATAACCTGTGTTATTTAAGGAATGGAG CAACAGCAGCCTGCGTAACGGAAGACGGAAACGCGGCGCCCCTGGTCTCCTTCTGGAACAGGGGAACGGGACGGACGGCC GCCGTTACGTTCGCCATGGGAGGAGAACTCGGAAAAAACATCCAGCAATGGGATAGCTACGGAGACCTTATCCAAACCCT GGCCCGGTGGCTCAACAGGAAAAATCCCCCACAGGGATACTCCGTGCGGGCGGACACGGCAGGAGACCGGTTACGGATTC GCCTTTACTACAGTGAGGAAAACATCCCGCGCCTGGCGGAACGCATGCCGGAAATATCCCTGGAACTCTCCGGAAAAGAA AGCTCCCGTACACAAAACGGTATCTGGGAACACCTGCAGCCGGGAATATTCCAGTGCAGCTTTCCCCTCCCGCACGGAGT CATGGCGCGGGGCGCGGTCCGCATCGGCGGCAGCGTTATCCCCTTCGGCCCTGTCAGCCAGCAGGTGGACCCGGAATGGG CCATGCCGCCTGAATCCGGCAACGCTTTCCTGGACCTGGTGAACCGGACCGGAGGCAGGGAAAGGATGGACCTTCCCTCC ATTTTCCGGGAACCGAGGCCCGGAACAAGCCTCCAACTCCGTCCCATCCTGCTGTGGAGCACCTGCGTCCTCCTTGTTCT GGACGCTCTGTTTACCAGGACCGGCCTGCTTCCCCGGGGACAACCGCGGCAGGGGGGTACGCGCTCCCGGCCTTCAGGAG AAAACAATCAATCTATCTGA
Upstream 100 bases:
>100_bases ACATGAAACGTGACCCTCTGGCCCCCCTCTGGCTGGCGCTGGCGTTCCTGGCCCTGATTCTTTCCTGGCTTCCTCCCGTC CCAGACATCTCCCTGCGCCC
Downstream 100 bases:
>100_bases AAATTTCCTTCAGGGCTGACTGTTCCTGAGGAGTAAGGCAATCAGACCACACGGCATCTCCACCGCGGGCCGGACGAGCC CCCCGGCCGCCGTGTTCCAG
Product: von Willebrand factor type A
Products: NA
Alternate protein names: Chloride Channel; Membrane-Associated Protein; Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor; Von Willebrand Factor Type A Domain Protein
Number of amino acids: Translated: 859; Mature: 859
Protein sequence:
>859_residues MIQFNTPEWFFLIPLLLAAGWKYRRLRLASPLRLLLQACLLLALAQPALDRGGKGMDLWVLVDRSNSTAGIPAAGAEEIQ AILERHKHAGDRVRLVDFAQSAVLRGRGDPVFAGGTAGTDMEQALAYTMALMSPNRTNRILMLTDGWPTTPLDQAAEQLI QSRIPVDYRLSVTFREADIRIEQIRTPARIRPGEAFILEATLAGPPGPAITVPWQISKNGGAPLRGTATLLNGKATVQLA DRLSTPGCSAYEMTITPQNDPIPENNRAVSFLEVTGGNGVLLLSGYDRDPLAPFLEAQGFRVQQPSGLNQLDARHLSGVG LVIINNLSASSVPPDFLHALDYYVREQGGGLLMCGGRHSFGSGGYFSSPIDELLPVSMEMKKDKMKLMTAMSIVLDRSGS MSCSVPGGKTKMDLANAGTCQTISLLSDQDLISVHAVDSEPHPIVTLSSLGPNRKKMISSVSRIASMGGGIFIGAGLKAG WQELQRSVAGTRHLLLFADADDSEEPADYRETLKEMVKEGVTVSVIALGTEKSADAGLLREIAELGRGRIFFCDRPGDIP SIFAQETVSVARAAFIRERTLLRGTAGWLQIAAGQPEWPPAVDGYNLCYLRNGATAACVTEDGNAAPLVSFWNRGTGRTA AVTFAMGGELGKNIQQWDSYGDLIQTLARWLNRKNPPQGYSVRADTAGDRLRIRLYYSEENIPRLAERMPEISLELSGKE SSRTQNGIWEHLQPGIFQCSFPLPHGVMARGAVRIGGSVIPFGPVSQQVDPEWAMPPESGNAFLDLVNRTGGRERMDLPS IFREPRPGTSLQLRPILLWSTCVLLVLDALFTRTGLLPRGQPRQGGTRSRPSGENNQSI
Sequences:
>Translated_859_residues MIQFNTPEWFFLIPLLLAAGWKYRRLRLASPLRLLLQACLLLALAQPALDRGGKGMDLWVLVDRSNSTAGIPAAGAEEIQ AILERHKHAGDRVRLVDFAQSAVLRGRGDPVFAGGTAGTDMEQALAYTMALMSPNRTNRILMLTDGWPTTPLDQAAEQLI QSRIPVDYRLSVTFREADIRIEQIRTPARIRPGEAFILEATLAGPPGPAITVPWQISKNGGAPLRGTATLLNGKATVQLA DRLSTPGCSAYEMTITPQNDPIPENNRAVSFLEVTGGNGVLLLSGYDRDPLAPFLEAQGFRVQQPSGLNQLDARHLSGVG LVIINNLSASSVPPDFLHALDYYVREQGGGLLMCGGRHSFGSGGYFSSPIDELLPVSMEMKKDKMKLMTAMSIVLDRSGS MSCSVPGGKTKMDLANAGTCQTISLLSDQDLISVHAVDSEPHPIVTLSSLGPNRKKMISSVSRIASMGGGIFIGAGLKAG WQELQRSVAGTRHLLLFADADDSEEPADYRETLKEMVKEGVTVSVIALGTEKSADAGLLREIAELGRGRIFFCDRPGDIP SIFAQETVSVARAAFIRERTLLRGTAGWLQIAAGQPEWPPAVDGYNLCYLRNGATAACVTEDGNAAPLVSFWNRGTGRTA AVTFAMGGELGKNIQQWDSYGDLIQTLARWLNRKNPPQGYSVRADTAGDRLRIRLYYSEENIPRLAERMPEISLELSGKE SSRTQNGIWEHLQPGIFQCSFPLPHGVMARGAVRIGGSVIPFGPVSQQVDPEWAMPPESGNAFLDLVNRTGGRERMDLPS IFREPRPGTSLQLRPILLWSTCVLLVLDALFTRTGLLPRGQPRQGGTRSRPSGENNQSI >Mature_859_residues MIQFNTPEWFFLIPLLLAAGWKYRRLRLASPLRLLLQACLLLALAQPALDRGGKGMDLWVLVDRSNSTAGIPAAGAEEIQ AILERHKHAGDRVRLVDFAQSAVLRGRGDPVFAGGTAGTDMEQALAYTMALMSPNRTNRILMLTDGWPTTPLDQAAEQLI QSRIPVDYRLSVTFREADIRIEQIRTPARIRPGEAFILEATLAGPPGPAITVPWQISKNGGAPLRGTATLLNGKATVQLA DRLSTPGCSAYEMTITPQNDPIPENNRAVSFLEVTGGNGVLLLSGYDRDPLAPFLEAQGFRVQQPSGLNQLDARHLSGVG LVIINNLSASSVPPDFLHALDYYVREQGGGLLMCGGRHSFGSGGYFSSPIDELLPVSMEMKKDKMKLMTAMSIVLDRSGS MSCSVPGGKTKMDLANAGTCQTISLLSDQDLISVHAVDSEPHPIVTLSSLGPNRKKMISSVSRIASMGGGIFIGAGLKAG WQELQRSVAGTRHLLLFADADDSEEPADYRETLKEMVKEGVTVSVIALGTEKSADAGLLREIAELGRGRIFFCDRPGDIP SIFAQETVSVARAAFIRERTLLRGTAGWLQIAAGQPEWPPAVDGYNLCYLRNGATAACVTEDGNAAPLVSFWNRGTGRTA AVTFAMGGELGKNIQQWDSYGDLIQTLARWLNRKNPPQGYSVRADTAGDRLRIRLYYSEENIPRLAERMPEISLELSGKE SSRTQNGIWEHLQPGIFQCSFPLPHGVMARGAVRIGGSVIPFGPVSQQVDPEWAMPPESGNAFLDLVNRTGGRERMDLPS IFREPRPGTSLQLRPILLWSTCVLLVLDALFTRTGLLPRGQPRQGGTRSRPSGENNQSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93174; Mature: 93174
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQFNTPEWFFLIPLLLAAGWKYRRLRLASPLRLLLQACLLLALAQPALDRGGKGMDLWV CCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LVDRSNSTAGIPAAGAEEIQAILERHKHAGDRVRLVDFAQSAVLRGRGDPVFAGGTAGTD EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCEEEECCCCCCC MEQALAYTMALMSPNRTNRILMLTDGWPTTPLDQAAEQLIQSRIPVDYRLSVTFREADIR HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCEE IEQIRTPARIRPGEAFILEATLAGPPGPAITVPWQISKNGGAPLRGTATLLNGKATVQLA EECCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCEEEEEH DRLSTPGCSAYEMTITPQNDPIPENNRAVSFLEVTGGNGVLLLSGYDRDPLAPFLEAQGF HHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHCCCC RVQQPSGLNQLDARHLSGVGLVIINNLSASSVPPDFLHALDYYVREQGGGLLMCGGRHSF EEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC GSGGYFSSPIDELLPVSMEMKKDKMKLMTAMSIVLDRSGSMSCSVPGGKTKMDLANAGTC CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCC QTISLLSDQDLISVHAVDSEPHPIVTLSSLGPNRKKMISSVSRIASMGGGIFIGAGLKAG EEEEECCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHH WQELQRSVAGTRHLLLFADADDSEEPADYRETLKEMVKEGVTVSVIALGTEKSADAGLLR HHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH EIAELGRGRIFFCDRPGDIPSIFAQETVSVARAAFIRERTLLRGTAGWLQIAAGQPEWPP HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC AVDGYNLCYLRNGATAACVTEDGNAAPLVSFWNRGTGRTAAVTFAMGGELGKNIQQWDSY CCCCCEEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCHHCCCHHHHHHH GDLIQTLARWLNRKNPPQGYSVRADTAGDRLRIRLYYSEENIPRLAERMPEISLELSGKE HHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHHCCCEEEEECCCC SSRTQNGIWEHLQPGIFQCSFPLPHGVMARGAVRIGGSVIPFGPVSQQVDPEWAMPPESG CCCHHHCCHHHCCCCCEEECCCCCCCHHHCCEEEECCEECCCCCCCCCCCCCCCCCCCCC NAFLDLVNRTGGRERMDLPSIFREPRPGTSLQLRPILLWSTCVLLVLDALFTRTGLLPRG CHHHHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC QPRQGGTRSRPSGENNQSI CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIQFNTPEWFFLIPLLLAAGWKYRRLRLASPLRLLLQACLLLALAQPALDRGGKGMDLWV CCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LVDRSNSTAGIPAAGAEEIQAILERHKHAGDRVRLVDFAQSAVLRGRGDPVFAGGTAGTD EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCEEEECCCCCCC MEQALAYTMALMSPNRTNRILMLTDGWPTTPLDQAAEQLIQSRIPVDYRLSVTFREADIR HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCEE IEQIRTPARIRPGEAFILEATLAGPPGPAITVPWQISKNGGAPLRGTATLLNGKATVQLA EECCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCEEEEEH DRLSTPGCSAYEMTITPQNDPIPENNRAVSFLEVTGGNGVLLLSGYDRDPLAPFLEAQGF HHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHCCCC RVQQPSGLNQLDARHLSGVGLVIINNLSASSVPPDFLHALDYYVREQGGGLLMCGGRHSF EEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC GSGGYFSSPIDELLPVSMEMKKDKMKLMTAMSIVLDRSGSMSCSVPGGKTKMDLANAGTC CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCC QTISLLSDQDLISVHAVDSEPHPIVTLSSLGPNRKKMISSVSRIASMGGGIFIGAGLKAG EEEEECCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHH WQELQRSVAGTRHLLLFADADDSEEPADYRETLKEMVKEGVTVSVIALGTEKSADAGLLR HHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH EIAELGRGRIFFCDRPGDIPSIFAQETVSVARAAFIRERTLLRGTAGWLQIAAGQPEWPP HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC AVDGYNLCYLRNGATAACVTEDGNAAPLVSFWNRGTGRTAAVTFAMGGELGKNIQQWDSY CCCCCEEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCHHCCCHHHHHHH GDLIQTLARWLNRKNPPQGYSVRADTAGDRLRIRLYYSEENIPRLAERMPEISLELSGKE HHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHHCCCEEEEECCCC SSRTQNGIWEHLQPGIFQCSFPLPHGVMARGAVRIGGSVIPFGPVSQQVDPEWAMPPESG CCCHHHCCHHHCCCCCEEECCCCCCCHHHCCEEEECCEECCCCCCCCCCCCCCCCCCCCC NAFLDLVNRTGGRERMDLPSIFREPRPGTSLQLRPILLWSTCVLLVLDALFTRTGLLPRG CHHHHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC QPRQGGTRSRPSGENNQSI CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA