Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735625
Identifier: 187735625
GI number: 187735625
Start: 1352830
End: 1352928
Strand: Direct
Name: 187735625
Synonym: Amuc_1130
Alternate gene names: NA
Gene position: 1352830-1352928 (Clockwise)
Preceding gene: 187735624
Following gene: 187735631
Centisome position: 50.78
GC content: 54.55
Gene sequence:
>99_bases ATGGCCGTGTTTTATCCGGTGCATTGGGAAGCAGCATGCGCCGCCCTTTGCCACCTGGGGGCAAAAAGCAGCCTTTTCTC CAACCAGGGCATTTTTTGA
Upstream 100 bases:
>100_bases TTCCGGCGAAGAATAATTCCTGTCTGTGTTGATGTTTTTGCCCTGCGGCGGATGCCGCAGGGCGTTTTTGTATCTTCCGG GCTTATTTTCCGCAGTTTGA
Downstream 100 bases:
>100_bases GAATGGGAGAGCGTTGGAGACGCCTGGATGAAAGCGGACTTTATTTCGTGCCGTTCCCCGTTCTTGTTCCTCCTAAACCT TTTTGCCTCTCCATTTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 32; Mature: 31
Protein sequence:
>32_residues MAVFYPVHWEAACAALCHLGAKSSLFSNQGIF
Sequences:
>Translated_32_residues MAVFYPVHWEAACAALCHLGAKSSLFSNQGIF >Mature_31_residues AVFYPVHWEAACAALCHLGAKSSLFSNQGIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3470; Mature: 3339
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFYPVHWEAACAALCHLGAKSSLFSNQGIF CEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AVFYPVHWEAACAALCHLGAKSSLFSNQGIF EEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA