Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735624
Identifier: 187735624
GI number: 187735624
Start: 1351924
End: 1352745
Strand: Direct
Name: 187735624
Synonym: Amuc_1129
Alternate gene names: NA
Gene position: 1351924-1352745 (Clockwise)
Preceding gene: 187735623
Following gene: 187735625
Centisome position: 50.75
GC content: 58.27
Gene sequence:
>822_bases ATGGCAAAAAAACCATTAGAAACAGGTGCTCCGGAAGCGTCCGCAGCTAAAAAAACGGCTGCTCGCAAGACGACGGCCAA AAAGACGGCCTCTACTACCAAAAAGGCCGCCGCAGCTGAAAAAAAAGCTGCTGCTGACGCCGCTTCCGTAGAAGCACCCA AAACCAAAATCAAAACGGTCAAGTCCGCCCCGAAAACCGCGGTGAAGACAAAAACCGCGAAAACAGCCAAAAAGGCGGCT GATGAAAAGGCCCCTGTCTCTGAAACGGTTGTTGCCCCTTCCGAGGCCCCGGCTCCTTCCGCTCCCGTGGAAAAGGAGAT GATGCCCGAAGCTCCCCAGAAGCCCCAGGCTGCCGCTCCGGTCAAGGTCAAGCGGGAATCGTTCCGCCCCAATCGCAATG CGGAACAGCAGGAGCGCCATGAACAGCATGGCGGAGATGTCTTTGCCCAGCCGGAAACGGTGGGCGGCGCCTCCGAAGGG CCCTTTAACAAGCGCAAGCGCCGCCGCCGCAATAAGAAAGGCGGCGGTTCCGAAGACCGCCAGCCCATGCAGGATGCCGC TTCTCTCAAGCAGTTGGATTGTAAGAAGGTGGCTTCCCGTGCCTGGAAAATGTTCCTGGCGGAGGTGTCTGAAGAAGGCC TTGCCCTGATGGACGACCAGACGGCGCGTGAGGCGGCCCGCCGCGCTTTCCGCTGTGCGGAATTCTTCATGATGGAGGAA GCGCGCCGCAAGCATGCCCAAAAAGCAGCTCTCCAGCAGCAGGAGAAAACTTCTTCTCCGGAAGAGGAACGGGATTCCGA AGAGGATTCCGGCGAAGAATAA
Upstream 100 bases:
>100_bases CGCTGTTGAAAGATCTCCCGGCTCTTCCGGATGAGGCTCCGTGATAAATCTCGACAATCTCCGGAATTGATTCATAATCC TTTCTTTCACTTGAAATTTT
Downstream 100 bases:
>100_bases TTCCTGTCTGTGTTGATGTTTTTGCCCTGCGGCGGATGCCGCAGGGCGTTTTTGTATCTTCCGGGCTTATTTTCCGCAGT TTGAATGGCCGTGTTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MAKKPLETGAPEASAAKKTAARKTTAKKTASTTKKAAAAEKKAAADAASVEAPKTKIKTVKSAPKTAVKTKTAKTAKKAA DEKAPVSETVVAPSEAPAPSAPVEKEMMPEAPQKPQAAAPVKVKRESFRPNRNAEQQERHEQHGGDVFAQPETVGGASEG PFNKRKRRRRNKKGGGSEDRQPMQDAASLKQLDCKKVASRAWKMFLAEVSEEGLALMDDQTAREAARRAFRCAEFFMMEE ARRKHAQKAALQQQEKTSSPEEERDSEEDSGEE
Sequences:
>Translated_273_residues MAKKPLETGAPEASAAKKTAARKTTAKKTASTTKKAAAAEKKAAADAASVEAPKTKIKTVKSAPKTAVKTKTAKTAKKAA DEKAPVSETVVAPSEAPAPSAPVEKEMMPEAPQKPQAAAPVKVKRESFRPNRNAEQQERHEQHGGDVFAQPETVGGASEG PFNKRKRRRRNKKGGGSEDRQPMQDAASLKQLDCKKVASRAWKMFLAEVSEEGLALMDDQTAREAARRAFRCAEFFMMEE ARRKHAQKAALQQQEKTSSPEEERDSEEDSGEE >Mature_272_residues AKKPLETGAPEASAAKKTAARKTTAKKTASTTKKAAAAEKKAAADAASVEAPKTKIKTVKSAPKTAVKTKTAKTAKKAAD EKAPVSETVVAPSEAPAPSAPVEKEMMPEAPQKPQAAAPVKVKRESFRPNRNAEQQERHEQHGGDVFAQPETVGGASEGP FNKRKRRRRNKKGGGSEDRQPMQDAASLKQLDCKKVASRAWKMFLAEVSEEGLALMDDQTAREAARRAFRCAEFFMMEEA RRKHAQKAALQQQEKTSSPEEERDSEEDSGEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29610; Mature: 29478
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKPLETGAPEASAAKKTAARKTTAKKTASTTKKAAAAEKKAAADAASVEAPKTKIKTV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KSAPKTAVKTKTAKTAKKAADEKAPVSETVVAPSEAPAPSAPVEKEMMPEAPQKPQAAAP HHCCHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCHHHCCCCCCCCCCCCC VKVKRESFRPNRNAEQQERHEQHGGDVFAQPETVGGASEGPFNKRKRRRRNKKGGGSEDR HHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCH QPMQDAASLKQLDCKKVASRAWKMFLAEVSEEGLALMDDQTAREAARRAFRCAEFFMMEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHH ARRKHAQKAALQQQEKTSSPEEERDSEEDSGEE HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC >Mature Secondary Structure AKKPLETGAPEASAAKKTAARKTTAKKTASTTKKAAAAEKKAAADAASVEAPKTKIKTV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KSAPKTAVKTKTAKTAKKAADEKAPVSETVVAPSEAPAPSAPVEKEMMPEAPQKPQAAAP HHCCHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCHHHCCCCCCCCCCCCC VKVKRESFRPNRNAEQQERHEQHGGDVFAQPETVGGASEGPFNKRKRRRRNKKGGGSEDR HHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCH QPMQDAASLKQLDCKKVASRAWKMFLAEVSEEGLALMDDQTAREAARRAFRCAEFFMMEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHH ARRKHAQKAALQQQEKTSSPEEERDSEEDSGEE HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA