Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735623
Identifier: 187735623
GI number: 187735623
Start: 1351604
End: 1351867
Strand: Direct
Name: 187735623
Synonym: Amuc_1128
Alternate gene names: NA
Gene position: 1351604-1351867 (Clockwise)
Preceding gene: 187735622
Following gene: 187735624
Centisome position: 50.73
GC content: 55.68
Gene sequence:
>264_bases ATGGAAATACCGGAGGAAATGATTGAAACGCTGGTGCCTGCCGTTCGGGAGCAGCTGGAGTCGCCGGACACCGCTTATGT CAAAAACTGTCTGGAACGCCTGACGGGGCGGGAAAAACTGGGAGAACAGGAAGCTCTGGAACTGATGGCGCAGGCTCTGG CCATTACTATTAATGCGATGGTGGTGGGGGGCCGCTCTTTTGATTCGGGAAAGTACAAGGCGCTGTTGAAAGATCTCCCG GCTCTTCCGGATGAGGCTCCGTGA
Upstream 100 bases:
>100_bases AAATGCCGCGTCCGCATGCCATTCGGGAGAGAATGTCTGCCCGGAAAAAATGCGCGTTCATTTGGTTCCATAGTAAAATA AAAGCAACAAAAGGACTATC
Downstream 100 bases:
>100_bases TAAATCTCGACAATCTCCGGAATTGATTCATAATCCTTTCTTTCACTTGAAATTTTATGGCAAAAAAACCATTAGAAACA GGTGCTCCGGAAGCGTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MEIPEEMIETLVPAVREQLESPDTAYVKNCLERLTGREKLGEQEALELMAQALAITINAMVVGGRSFDSGKYKALLKDLP ALPDEAP
Sequences:
>Translated_87_residues MEIPEEMIETLVPAVREQLESPDTAYVKNCLERLTGREKLGEQEALELMAQALAITINAMVVGGRSFDSGKYKALLKDLP ALPDEAP >Mature_87_residues MEIPEEMIETLVPAVREQLESPDTAYVKNCLERLTGREKLGEQEALELMAQALAITINAMVVGGRSFDSGKYKALLKDLP ALPDEAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9558; Mature: 9558
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIPEEMIETLVPAVREQLESPDTAYVKNCLERLTGREKLGEQEALELMAQALAITINAM CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHH VVGGRSFDSGKYKALLKDLPALPDEAP HCCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEIPEEMIETLVPAVREQLESPDTAYVKNCLERLTGREKLGEQEALELMAQALAITINAM CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHH VVGGRSFDSGKYKALLKDLPALPDEAP HCCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA