Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735617
Identifier: 187735617
GI number: 187735617
Start: 1344036
End: 1344563
Strand: Reverse
Name: 187735617
Synonym: Amuc_1122
Alternate gene names: NA
Gene position: 1344563-1344036 (Counterclockwise)
Preceding gene: 187735618
Following gene: 187735616
Centisome position: 50.47
GC content: 54.17
Gene sequence:
>528_bases GTGAATAACAATTCTTCCATCCTTTTCGGCCTTTTTGATGAATTTCTTTGGATCCGGTGTTCCGGACGCGGAAGTTTTGC CAATAGTCCGACTGTCAAATCCCTGGGGGACGATTACATCGCTTCCGGAGGGCGTCTGATCGTCATTGATCTGGAAACTT GCTCCGGCATTGACTCCACCTTCATGGGCACTCTTGCGGGCCTGTCCCGACGGCTGCTTCCCATCGGGGGATCCGTCCAA ATCGCTTCCCCGAGCGAACGCTGCCTGAGCGCCCTGGAAAGCCTGGGGCTGGACGCCCTGCTCAGCATTGAACCGCCCAC AGCCCCCTGGAGGGGAAAAGTAGAGCAGATACGTGCCGCCCTGGGTACTGAAAATGCCCCTTCCGTTCACTTGGATGCCA AGGAGCAAACTCTCCACGTTCTCAACTCCCATTTGACCCTGAGCGAAATGAGCGAAGAGAACGAAGAAAAATTCCGCAAC GTAACCGACTGCCTGAAAGAAGAATTGGAACGGCAGAAAGATCAATAA
Upstream 100 bases:
>100_bases TGCGAGAAAACGAACCTTCTTCCGGCGGCGCGCAAATTAAATCCTGACTTGACCGCAGAGGTTTCTCTTGTTATTCATAT GGTTTCCATTTTCTAACGAC
Downstream 100 bases:
>100_bases AAATACCTCCCCTCCACATGGACCTGCGCTCCATGGCCTCCCTGTATGAGGAAGCCCTTTCCGCAGCAAGGGAAGAAGGG CCGGCCGCCGTCAGGGAACA
Product: Sulfate transporter/antisigma-factor antagonist STAS
Products: NA
Alternate protein names: Anti-Anti-Sigma Regulatory Factor RsbS; Anti-Sigma-Factor Antagonist
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNNNSSILFGLFDEFLWIRCSGRGSFANSPTVKSLGDDYIASGGRLIVIDLETCSGIDSTFMGTLAGLSRRLLPIGGSVQ IASPSERCLSALESLGLDALLSIEPPTAPWRGKVEQIRAALGTENAPSVHLDAKEQTLHVLNSHLTLSEMSEENEEKFRN VTDCLKEELERQKDQ
Sequences:
>Translated_175_residues MNNNSSILFGLFDEFLWIRCSGRGSFANSPTVKSLGDDYIASGGRLIVIDLETCSGIDSTFMGTLAGLSRRLLPIGGSVQ IASPSERCLSALESLGLDALLSIEPPTAPWRGKVEQIRAALGTENAPSVHLDAKEQTLHVLNSHLTLSEMSEENEEKFRN VTDCLKEELERQKDQ >Mature_175_residues MNNNSSILFGLFDEFLWIRCSGRGSFANSPTVKSLGDDYIASGGRLIVIDLETCSGIDSTFMGTLAGLSRRLLPIGGSVQ IASPSERCLSALESLGLDALLSIEPPTAPWRGKVEQIRAALGTENAPSVHLDAKEQTLHVLNSHLTLSEMSEENEEKFRN VTDCLKEELERQKDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19094; Mature: 19094
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNSSILFGLFDEFLWIRCSGRGSFANSPTVKSLGDDYIASGGRLIVIDLETCSGIDST CCCCCEEEHEEHHHEEEEEECCCCCCCCCCCHHHCCCHHHHCCCEEEEEECCCCCCCCHH FMGTLAGLSRRLLPIGGSVQIASPSERCLSALESLGLDALLSIEPPTAPWRGKVEQIRAA HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH LGTENAPSVHLDAKEQTLHVLNSHLTLSEMSEENEEKFRNVTDCLKEELERQKDQ HCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNNSSILFGLFDEFLWIRCSGRGSFANSPTVKSLGDDYIASGGRLIVIDLETCSGIDST CCCCCEEEHEEHHHEEEEEECCCCCCCCCCCHHHCCCHHHHCCCEEEEEECCCCCCCCHH FMGTLAGLSRRLLPIGGSVQIASPSERCLSALESLGLDALLSIEPPTAPWRGKVEQIRAA HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH LGTENAPSVHLDAKEQTLHVLNSHLTLSEMSEENEEKFRNVTDCLKEELERQKDQ HCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA