Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735616

Identifier: 187735616

GI number: 187735616

Start: 1342645

End: 1344018

Strand: Reverse

Name: 187735616

Synonym: Amuc_1121

Alternate gene names: NA

Gene position: 1344018-1342645 (Counterclockwise)

Preceding gene: 187735617

Following gene: 187735614

Centisome position: 50.45

GC content: 59.02

Gene sequence:

>1374_bases
ATGGACCTGCGCTCCATGGCCTCCCTGTATGAGGAAGCCCTTTCCGCAGCAAGGGAAGAAGGGCCGGCCGCCGTCAGGGA
ACATTCCGTTTCCAATCATTCCGCCCTTCCGGACGAGCGGACTCTTCAGCTTCTTCTTCTGGAAGGAGTATTCGGAACCT
CTTTTACGGATGATTCAGGCAGGGACGTTCACATTCTGGATTTCGGGAACTGGAATAAATCCGCCGGACCGGACTTTCTA
AACGCCAGGATATGCATTAATGGCGTCCCGCAATCGGGAGATATCGAACTGGATCCCGCGCCGGAAGACTGGGAACGCCA
CGGGCACGGTTCCAACCCGGGGTTTAACGGCGTTATCCTGCACCTCGCCTGTGCGCCCAGCCGCAGGAAATGGTTCACCC
GCAATGCCAGGCATGAACGCGTTCCTCTGGCTGTCATTCCCCCCGCTACGCTGGCGCGGTCAGGAACATCCCCTTCCGGC
AACGCCCCGGTACGCCACTGCCGCCACTCCGGACTGCTGGCATCCATGGCTCCGGAGTTTCTGGAAACACTCCTCCAATC
AGCGGCAGCCTACAGGTTCCGGAACAAGCACCGCCGCCATGCGGAACGCGCCAAATACGCAGGAGAGGAACAGGCCCTTT
TTGAAAACCTGGCGGAAACGCTGGGCTATCACGCCAACAAAACCGCCATGCGCCACCTGGCCCTGCGGGCGCCCCTGCGT
TCCATCCGGAACTGTCCGGAAGCCCTGCTTTTCGGTACGGCGGGCTTCCTCCTTCCCGTTCTTCCGGCCTCCTGCACACC
GGAAGCCGTAGAACTCCACAAAAAACTCTGGGCTCAATGGTGGCCCCTGCGGGCGCAATTTGAACTGGCACCGGACCGCT
CCTTTCCCTGGACGTATTCCGGCAACAGGCCGGCCAACCATCCGCAGAGGCGCGTAGGGGCGCTGGCCGTCATCACAGCA
GATTTTGATGCGTTTAAGCGTCTTTGCCTTGCCGGACATACGGAAGAGCTGACGAAGTACCTCTCCTCCCTTACACACCC
CTACTGGAGTACCCATGTAACGCTTCCTTCCCCACCGTCTCCCCGCCCCATGGCCCTGATGGGCCGGGATAGAATTCTGG
ACTTCATCATCAATCACCTTCTCCCGATGAAAGATGACGAACATGCATGGAAGCATTATCTTTCCCTCCGGGCCGGACAG
GCGGGAACAAAAGTCCTCTCCGTCCACCAATCCCTGCTGGGCGGCAGGCCGGATGCACACGCCTTTCTTGCGAAAGCCTG
GCACCACCAAGCATTGCTTCAAATTCACGAAGACCTGTGTTCCCTCCATTCCTGCGCCATTTGCTCCCTGCTCAGGCAGA
TGGAAAAGAAATGA

Upstream 100 bases:

>100_bases
AAATGAGCGAAGAGAACGAAGAAAAATTCCGCAACGTAACCGACTGCCTGAAAGAAGAATTGGAACGGCAGAAAGATCAA
TAAAAATACCTCCCCTCCAC

Downstream 100 bases:

>100_bases
GAGCGCAGCCCTTCTTTCCTTAAGACGGGGTGAAGAACCGCCCCCTGCGAAAACCCTTCCCAATCTTTACATCCCGAGAG
GAATTCCTTCTTTCGGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MDLRSMASLYEEALSAAREEGPAAVREHSVSNHSALPDERTLQLLLLEGVFGTSFTDDSGRDVHILDFGNWNKSAGPDFL
NARICINGVPQSGDIELDPAPEDWERHGHGSNPGFNGVILHLACAPSRRKWFTRNARHERVPLAVIPPATLARSGTSPSG
NAPVRHCRHSGLLASMAPEFLETLLQSAAAYRFRNKHRRHAERAKYAGEEQALFENLAETLGYHANKTAMRHLALRAPLR
SIRNCPEALLFGTAGFLLPVLPASCTPEAVELHKKLWAQWWPLRAQFELAPDRSFPWTYSGNRPANHPQRRVGALAVITA
DFDAFKRLCLAGHTEELTKYLSSLTHPYWSTHVTLPSPPSPRPMALMGRDRILDFIINHLLPMKDDEHAWKHYLSLRAGQ
AGTKVLSVHQSLLGGRPDAHAFLAKAWHHQALLQIHEDLCSLHSCAICSLLRQMEKK

Sequences:

>Translated_457_residues
MDLRSMASLYEEALSAAREEGPAAVREHSVSNHSALPDERTLQLLLLEGVFGTSFTDDSGRDVHILDFGNWNKSAGPDFL
NARICINGVPQSGDIELDPAPEDWERHGHGSNPGFNGVILHLACAPSRRKWFTRNARHERVPLAVIPPATLARSGTSPSG
NAPVRHCRHSGLLASMAPEFLETLLQSAAAYRFRNKHRRHAERAKYAGEEQALFENLAETLGYHANKTAMRHLALRAPLR
SIRNCPEALLFGTAGFLLPVLPASCTPEAVELHKKLWAQWWPLRAQFELAPDRSFPWTYSGNRPANHPQRRVGALAVITA
DFDAFKRLCLAGHTEELTKYLSSLTHPYWSTHVTLPSPPSPRPMALMGRDRILDFIINHLLPMKDDEHAWKHYLSLRAGQ
AGTKVLSVHQSLLGGRPDAHAFLAKAWHHQALLQIHEDLCSLHSCAICSLLRQMEKK
>Mature_457_residues
MDLRSMASLYEEALSAAREEGPAAVREHSVSNHSALPDERTLQLLLLEGVFGTSFTDDSGRDVHILDFGNWNKSAGPDFL
NARICINGVPQSGDIELDPAPEDWERHGHGSNPGFNGVILHLACAPSRRKWFTRNARHERVPLAVIPPATLARSGTSPSG
NAPVRHCRHSGLLASMAPEFLETLLQSAAAYRFRNKHRRHAERAKYAGEEQALFENLAETLGYHANKTAMRHLALRAPLR
SIRNCPEALLFGTAGFLLPVLPASCTPEAVELHKKLWAQWWPLRAQFELAPDRSFPWTYSGNRPANHPQRRVGALAVITA
DFDAFKRLCLAGHTEELTKYLSSLTHPYWSTHVTLPSPPSPRPMALMGRDRILDFIINHLLPMKDDEHAWKHYLSLRAGQ
AGTKVLSVHQSLLGGRPDAHAFLAKAWHHQALLQIHEDLCSLHSCAICSLLRQMEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50965; Mature: 50965

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRSMASLYEEALSAAREEGPAAVREHSVSNHSALPDERTLQLLLLEGVFGTSFTDDSG
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
RDVHILDFGNWNKSAGPDFLNARICINGVPQSGDIELDPAPEDWERHGHGSNPGFNGVIL
CEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCHHHHCCCCCCCCCCCEEE
HLACAPSRRKWFTRNARHERVPLAVIPPATLARSGTSPSGNAPVRHCRHSGLLASMAPEF
EEEECCCHHHHHHCCCCCCCCCEEEECCHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHH
LETLLQSAAAYRFRNKHRRHAERAKYAGEEQALFENLAETLGYHANKTAMRHLALRAPLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
SIRNCPEALLFGTAGFLLPVLPASCTPEAVELHKKLWAQWWPLRAQFELAPDRSFPWTYS
HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
GNRPANHPQRRVGALAVITADFDAFKRLCLAGHTEELTKYLSSLTHPYWSTHVTLPSPPS
CCCCCCCHHHHHCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCCC
PRPMALMGRDRILDFIINHLLPMKDDEHAWKHYLSLRAGQAGTKVLSVHQSLLGGRPDAH
CCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH
AFLAKAWHHQALLQIHEDLCSLHSCAICSLLRQMEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLRSMASLYEEALSAAREEGPAAVREHSVSNHSALPDERTLQLLLLEGVFGTSFTDDSG
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
RDVHILDFGNWNKSAGPDFLNARICINGVPQSGDIELDPAPEDWERHGHGSNPGFNGVIL
CEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCHHHHCCCCCCCCCCCEEE
HLACAPSRRKWFTRNARHERVPLAVIPPATLARSGTSPSGNAPVRHCRHSGLLASMAPEF
EEEECCCHHHHHHCCCCCCCCCEEEECCHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHH
LETLLQSAAAYRFRNKHRRHAERAKYAGEEQALFENLAETLGYHANKTAMRHLALRAPLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
SIRNCPEALLFGTAGFLLPVLPASCTPEAVELHKKLWAQWWPLRAQFELAPDRSFPWTYS
HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
GNRPANHPQRRVGALAVITADFDAFKRLCLAGHTEELTKYLSSLTHPYWSTHVTLPSPPS
CCCCCCCHHHHHCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCCC
PRPMALMGRDRILDFIINHLLPMKDDEHAWKHYLSLRAGQAGTKVLSVHQSLLGGRPDAH
CCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH
AFLAKAWHHQALLQIHEDLCSLHSCAICSLLRQMEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA