Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735566
Identifier: 187735566
GI number: 187735566
Start: 1278857
End: 1279840
Strand: Direct
Name: 187735566
Synonym: Amuc_1071
Alternate gene names: NA
Gene position: 1278857-1279840 (Clockwise)
Preceding gene: 187735564
Following gene: 187735567
Centisome position: 48.0
GC content: 49.39
Gene sequence:
>984_bases ATGGATACTTCTTCCCGGAAAACGTCTCTTGTTGTATTGTTCAACCATCAGTATGAACGTAACATTCCGGTAATCAGAGA GCTTTATTCAAGACGCTTTTCCGGGTTGCTTCAATTAATGCCCTACTACAAGGGAGATGCCCCTGACGTATGTTCCGTCT TCGGGAATTCTTTCCAGTTCTATAATTATATTTTGCAGTCCAGGGAAAGAATCAGGCAGTTGGAGGGCGATTATTTTCTT ATTATCGGAGACGATCTTCTTTTAAATCCCAGGTTTGACGAATTTTCAACGCCGTCCCTGCTGGGAATCCATGGGGAGGA TACGTGTTACCTTGACGGTTTTGTGGACGTTTCTCTGCCGGTGTGTTACCGGGGAACGGCGGAAGCCCACCATTTTTCCA TAACCCCTCCCGGTATTGATGCGGAAAGCGTCAACAGGAACGTTCCCTCCTATGAGGAGGCCAGGCGGATTTTAAAATCC AGGAACCTCATGCGGCATGATGAATTGTCGCGCGTACGCATGTTTCTGCCCAAATGGAGCCCCGGGGGGATTCATGCGAA TTGGAAAGTGTTGAAGGGCAGGGTATGGCATCTGCTGAATTACTGGAAGCACCGGATTAAAAAATACCGGTATTCCTATC CTGTCGTTTTCGGATATTCGGACATTGTCTGCATTCCGAAAGGGAAATTAGACGATTTCTGCCGTATCCTTGAAGTGTTC TCCGCATGGAACATGTTTGTGGAGCTGGCCATTCCCACGGCGTTGCAGCTTCTTCCCGGAACAAAGCTGTCTACGCTGGA GGACACGCAGTACAAGTCGGGAAACGTCTGGTTTCCCCAGGATCCGGAACACTTTGAAGCCATGAATGCCGTCATTGACG GGCTCGTGTCCTCTTCCGGAGGAGACCTCGGCAAGCTGCTTGCCTCCTTTCCGGAGGAATACCTGTATCTCCATCCCGTG AAATTGTCCCGTTTCGCCAGATAG
Upstream 100 bases:
>100_bases CCCGCACTCTTTTTACTGTGCGTGCACTCAGAGAGCAAATCCCTTTTTTTTCAATAATTTATGTTGAAGGGTACGGTTTG TTTCTCAACATCAAACGGCC
Downstream 100 bases:
>100_bases TGGCGTCCATAAATTGTTTTTTTATCCCATGATGAAATATGCTGTGATCGGAGCCGGGGTTTCCGGATTGTCCATGGCCG GAATGTTGCTGAAGAAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQFYNYILQSRERIRQLEGDYFL IIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLPVCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKS RNLMRHDELSRVRMFLPKWSPGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSGGDLGKLLASFPEEYLYLHPV KLSRFAR
Sequences:
>Translated_327_residues MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQFYNYILQSRERIRQLEGDYFL IIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLPVCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKS RNLMRHDELSRVRMFLPKWSPGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSGGDLGKLLASFPEEYLYLHPV KLSRFAR >Mature_327_residues MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQFYNYILQSRERIRQLEGDYFL IIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLPVCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKS RNLMRHDELSRVRMFLPKWSPGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSGGDLGKLLASFPEEYLYLHPV KLSRFAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37812; Mature: 37812
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQF CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHH YNYILQSRERIRQLEGDYFLIIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLP HHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCEEEECCCCCEEEECEEEECCC VCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKSRNLMRHDELSRVRMFLPKWS EEECCCCCCCEEECCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC PGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCHHHHHHHHHHH SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCC GDLGKLLASFPEEYLYLHPVKLSRFAR CHHHHHHHHCCHHHEEECCHHHHHCCC >Mature Secondary Structure MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQF CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHH YNYILQSRERIRQLEGDYFLIIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLP HHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCEEEECCCCCEEEECEEEECCC VCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKSRNLMRHDELSRVRMFLPKWS EEECCCCCCCEEECCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC PGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCHHHHHHHHHHH SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCC GDLGKLLASFPEEYLYLHPVKLSRFAR CHHHHHHHHCCHHHEEECCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA