Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735566

Identifier: 187735566

GI number: 187735566

Start: 1278857

End: 1279840

Strand: Direct

Name: 187735566

Synonym: Amuc_1071

Alternate gene names: NA

Gene position: 1278857-1279840 (Clockwise)

Preceding gene: 187735564

Following gene: 187735567

Centisome position: 48.0

GC content: 49.39

Gene sequence:

>984_bases
ATGGATACTTCTTCCCGGAAAACGTCTCTTGTTGTATTGTTCAACCATCAGTATGAACGTAACATTCCGGTAATCAGAGA
GCTTTATTCAAGACGCTTTTCCGGGTTGCTTCAATTAATGCCCTACTACAAGGGAGATGCCCCTGACGTATGTTCCGTCT
TCGGGAATTCTTTCCAGTTCTATAATTATATTTTGCAGTCCAGGGAAAGAATCAGGCAGTTGGAGGGCGATTATTTTCTT
ATTATCGGAGACGATCTTCTTTTAAATCCCAGGTTTGACGAATTTTCAACGCCGTCCCTGCTGGGAATCCATGGGGAGGA
TACGTGTTACCTTGACGGTTTTGTGGACGTTTCTCTGCCGGTGTGTTACCGGGGAACGGCGGAAGCCCACCATTTTTCCA
TAACCCCTCCCGGTATTGATGCGGAAAGCGTCAACAGGAACGTTCCCTCCTATGAGGAGGCCAGGCGGATTTTAAAATCC
AGGAACCTCATGCGGCATGATGAATTGTCGCGCGTACGCATGTTTCTGCCCAAATGGAGCCCCGGGGGGATTCATGCGAA
TTGGAAAGTGTTGAAGGGCAGGGTATGGCATCTGCTGAATTACTGGAAGCACCGGATTAAAAAATACCGGTATTCCTATC
CTGTCGTTTTCGGATATTCGGACATTGTCTGCATTCCGAAAGGGAAATTAGACGATTTCTGCCGTATCCTTGAAGTGTTC
TCCGCATGGAACATGTTTGTGGAGCTGGCCATTCCCACGGCGTTGCAGCTTCTTCCCGGAACAAAGCTGTCTACGCTGGA
GGACACGCAGTACAAGTCGGGAAACGTCTGGTTTCCCCAGGATCCGGAACACTTTGAAGCCATGAATGCCGTCATTGACG
GGCTCGTGTCCTCTTCCGGAGGAGACCTCGGCAAGCTGCTTGCCTCCTTTCCGGAGGAATACCTGTATCTCCATCCCGTG
AAATTGTCCCGTTTCGCCAGATAG

Upstream 100 bases:

>100_bases
CCCGCACTCTTTTTACTGTGCGTGCACTCAGAGAGCAAATCCCTTTTTTTTCAATAATTTATGTTGAAGGGTACGGTTTG
TTTCTCAACATCAAACGGCC

Downstream 100 bases:

>100_bases
TGGCGTCCATAAATTGTTTTTTTATCCCATGATGAAATATGCTGTGATCGGAGCCGGGGTTTCCGGATTGTCCATGGCCG
GAATGTTGCTGAAGAAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQFYNYILQSRERIRQLEGDYFL
IIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLPVCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKS
RNLMRHDELSRVRMFLPKWSPGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF
SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSGGDLGKLLASFPEEYLYLHPV
KLSRFAR

Sequences:

>Translated_327_residues
MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQFYNYILQSRERIRQLEGDYFL
IIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLPVCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKS
RNLMRHDELSRVRMFLPKWSPGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF
SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSGGDLGKLLASFPEEYLYLHPV
KLSRFAR
>Mature_327_residues
MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQFYNYILQSRERIRQLEGDYFL
IIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLPVCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKS
RNLMRHDELSRVRMFLPKWSPGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF
SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSGGDLGKLLASFPEEYLYLHPV
KLSRFAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37812; Mature: 37812

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQF
CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHH
YNYILQSRERIRQLEGDYFLIIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLP
HHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCEEEECCCCCEEEECEEEECCC
VCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKSRNLMRHDELSRVRMFLPKWS
EEECCCCCCCEEECCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCHHHHHHHHHHH
SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCC
GDLGKLLASFPEEYLYLHPVKLSRFAR
CHHHHHHHHCCHHHEEECCHHHHHCCC
>Mature Secondary Structure
MDTSSRKTSLVVLFNHQYERNIPVIRELYSRRFSGLLQLMPYYKGDAPDVCSVFGNSFQF
CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHH
YNYILQSRERIRQLEGDYFLIIGDDLLLNPRFDEFSTPSLLGIHGEDTCYLDGFVDVSLP
HHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCEEEECCCCCEEEECEEEECCC
VCYRGTAEAHHFSITPPGIDAESVNRNVPSYEEARRILKSRNLMRHDELSRVRMFLPKWS
EEECCCCCCCEEECCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PGGIHANWKVLKGRVWHLLNYWKHRIKKYRYSYPVVFGYSDIVCIPKGKLDDFCRILEVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCHHHHHHHHHHH
SAWNMFVELAIPTALQLLPGTKLSTLEDTQYKSGNVWFPQDPEHFEAMNAVIDGLVSSSG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCC
GDLGKLLASFPEEYLYLHPVKLSRFAR
CHHHHHHHHCCHHHEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA