Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is ahcY [H]
Identifier: 187735564
GI number: 187735564
Start: 1275836
End: 1277251
Strand: Direct
Name: ahcY [H]
Synonym: Amuc_1069
Alternate gene names: 187735564
Gene position: 1275836-1277251 (Clockwise)
Preceding gene: 187735563
Following gene: 187735566
Centisome position: 47.89
GC content: 60.24
Gene sequence:
>1416_bases ATGTTTTCAGAAACGGAACAATACAAGGTGCGCGATATCGGCCTGGCGGATTTCGGACGCAGGGAACTGGATATTGCGGA GCATGAGATGCCCGGCCTGATGGCCGTGCGTGAAAAGTACGCTGCAGCCAGGCCCCTGGAGGGCGTGCGCATCATGGGCT CCCTGCACATGACGGTGCAGACGGCCGTGCTGATAGAAACGCTGACGGCTCTGGGCGCTTCCGTCCGCTGGGCGAGCTGC AACATTTTCTCCACCCAGGACCACGCCGCCGCCGCCATCGCCAAATCCGGCACCCCCGTTTTCGCCTGGAAGGGGGAAAC GCTGCGGGAATACTGGGACTGCACGTGGAAGGCCATGAACTTTCCGGACGGGCTGGGGCCGCAGCTGATTGTGGACGACG GCGGAGACGCCACCCTGCTTATCCACCGCGGGTATGAAATGGAGGAAGGCTCCGACTGGGTGGATACCCCGTCGGAATCG GAAGAAGAGGAAGTCGTCAAGGCCCTGTTGAAAAAAATTGCCGCGGCGACTCCGGGCATTTTCCATCGCTGGCTTCCCGA GCTGAAGGGCGTTTCCGAGGAAACGACCACCGGCGTGCACCGCCTGTACCAGATGCAGGCCGCCGGCCGTCTGCTGATTC CGGCCATCAACGTAAACGATTCCGTAACCAAGTCCAAGTTTGACAACCTGTACGGCTGCCGTGAGTCCCTTGTGGACGGC ATCAAGCGGGCCACGGACGTGATGGTTGCCGGGAAGGTGGCCGTCGTCTGCGGCTACGGGGACGTAGGCAAAGGCTGCGC CCAGTCCCTGCGCGGCATGGGAGCCCAGGTGGTCGTGACGGAAATAGACCCCATCTGCGCTCTTCAGGCAGCCATGGAAG GTTACCGCGTACTGACGGTGGAAGACACGCTGGGCTGGGCGGATATTTACGTGACCACTACGGGAAACTGCAACATCATC CGCATCGAACACATGGAAAAAATGAAGGACCAGGCCATTGTCTGCAACATCGGCCACTTCGACAATGAAATCCAGGTACA CAAGCTCCAGACGTATCCCGGCATCAGGCATCTTAACATCAAGCCGCAGGTGGACCGCTACACGTTCCCGTCCGGCAACA GCCTGTATCTTCTGGCGGAAGGCCGCCTGGTCAACCTGGGCTGCGCTACGGGTCATCCCAGCTTCGTGATGTCCAACAGC TTCGCCAACCAGGTGCTGGCCCAGCTGGAACTGTGGAATACCCGTAAAGACCGTTCCGTGGGCGTGGAAGTGCTGCCCAA GGTGCTGGATGAGGAAGTGGCGCGGCTGCACCTCGCCAAGATAGGGTGCAAGCTGACTGTCCTGCGTCCGGAGCAGGCGG ACTACATCGGCGTTCCGGTGGAAGGTCCTTACAAGCCGGACTTTTACAGGTATTAA
Upstream 100 bases:
>100_bases ATTTCACCAATCCGGAGCTGCCCTGGGAACAGCTGGACGAAACGCGCCTGGCCTCCCTGAAACAACTTCTTCATTAATTC CTACGACAACGCTTACAGAC
Downstream 100 bases:
>100_bases CCTTGTCAAGGTTTTCTTTTCCTGGCCGTTCCGCGCAGGCCTGTCCGGCGGAACGGCTTTTTTGTTTTCCCGATGATGGA GGGAAGCAGGATAACGGTAC
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MFSETEQYKVRDIGLADFGRRELDIAEHEMPGLMAVREKYAAARPLEGVRIMGSLHMTVQTAVLIETLTALGASVRWASC NIFSTQDHAAAAIAKSGTPVFAWKGETLREYWDCTWKAMNFPDGLGPQLIVDDGGDATLLIHRGYEMEEGSDWVDTPSES EEEEVVKALLKKIAAATPGIFHRWLPELKGVSEETTTGVHRLYQMQAAGRLLIPAINVNDSVTKSKFDNLYGCRESLVDG IKRATDVMVAGKVAVVCGYGDVGKGCAQSLRGMGAQVVVTEIDPICALQAAMEGYRVLTVEDTLGWADIYVTTTGNCNII RIEHMEKMKDQAIVCNIGHFDNEIQVHKLQTYPGIRHLNIKPQVDRYTFPSGNSLYLLAEGRLVNLGCATGHPSFVMSNS FANQVLAQLELWNTRKDRSVGVEVLPKVLDEEVARLHLAKIGCKLTVLRPEQADYIGVPVEGPYKPDFYRY
Sequences:
>Translated_471_residues MFSETEQYKVRDIGLADFGRRELDIAEHEMPGLMAVREKYAAARPLEGVRIMGSLHMTVQTAVLIETLTALGASVRWASC NIFSTQDHAAAAIAKSGTPVFAWKGETLREYWDCTWKAMNFPDGLGPQLIVDDGGDATLLIHRGYEMEEGSDWVDTPSES EEEEVVKALLKKIAAATPGIFHRWLPELKGVSEETTTGVHRLYQMQAAGRLLIPAINVNDSVTKSKFDNLYGCRESLVDG IKRATDVMVAGKVAVVCGYGDVGKGCAQSLRGMGAQVVVTEIDPICALQAAMEGYRVLTVEDTLGWADIYVTTTGNCNII RIEHMEKMKDQAIVCNIGHFDNEIQVHKLQTYPGIRHLNIKPQVDRYTFPSGNSLYLLAEGRLVNLGCATGHPSFVMSNS FANQVLAQLELWNTRKDRSVGVEVLPKVLDEEVARLHLAKIGCKLTVLRPEQADYIGVPVEGPYKPDFYRY >Mature_471_residues MFSETEQYKVRDIGLADFGRRELDIAEHEMPGLMAVREKYAAARPLEGVRIMGSLHMTVQTAVLIETLTALGASVRWASC NIFSTQDHAAAAIAKSGTPVFAWKGETLREYWDCTWKAMNFPDGLGPQLIVDDGGDATLLIHRGYEMEEGSDWVDTPSES EEEEVVKALLKKIAAATPGIFHRWLPELKGVSEETTTGVHRLYQMQAAGRLLIPAINVNDSVTKSKFDNLYGCRESLVDG IKRATDVMVAGKVAVVCGYGDVGKGCAQSLRGMGAQVVVTEIDPICALQAAMEGYRVLTVEDTLGWADIYVTTTGNCNII RIEHMEKMKDQAIVCNIGHFDNEIQVHKLQTYPGIRHLNIKPQVDRYTFPSGNSLYLLAEGRLVNLGCATGHPSFVMSNS FANQVLAQLELWNTRKDRSVGVEVLPKVLDEEVARLHLAKIGCKLTVLRPEQADYIGVPVEGPYKPDFYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=470, Percent_Identity=60.6382978723404, Blast_Score=540, Evalue=1e-154, Organism=Homo sapiens, GI239937451, Length=442, Percent_Identity=60.6334841628959, Blast_Score=509, Evalue=1e-144, Organism=Homo sapiens, GI24308043, Length=468, Percent_Identity=48.0769230769231, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI298286489, Length=468, Percent_Identity=48.0769230769231, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI195539337, Length=468, Percent_Identity=48.0769230769231, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI195539349, Length=468, Percent_Identity=48.0769230769231, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI21361647, Length=468, Percent_Identity=46.3675213675214, Blast_Score=423, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17506425, Length=474, Percent_Identity=60.337552742616, Blast_Score=548, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6320882, Length=487, Percent_Identity=57.4948665297741, Blast_Score=521, Evalue=1e-149, Organism=Drosophila melanogaster, GI24642172, Length=464, Percent_Identity=60.9913793103448, Blast_Score=545, Evalue=1e-155, Organism=Drosophila melanogaster, GI24656245, Length=469, Percent_Identity=49.2537313432836, Blast_Score=448, Evalue=1e-126, Organism=Drosophila melanogaster, GI45553387, Length=464, Percent_Identity=47.4137931034483, Blast_Score=415, Evalue=1e-116, Organism=Drosophila melanogaster, GI45553385, Length=463, Percent_Identity=47.3002159827214, Blast_Score=412, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 52068; Mature: 52068
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSETEQYKVRDIGLADFGRRELDIAEHEMPGLMAVREKYAAARPLEGVRIMGSLHMTVQ CCCCCCCEEEEECCCHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHH TAVLIETLTALGASVRWASCNIFSTQDHAAAAIAKSGTPVFAWKGETLREYWDCTWKAMN HHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHCCCCEEEEECCHHHHHHHCCEEEECC FPDGLGPQLIVDDGGDATLLIHRGYEMEEGSDWVDTPSESEEEEVVKALLKKIAAATPGI CCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH FHRWLPELKGVSEETTTGVHRLYQMQAAGRLLIPAINVNDSVTKSKFDNLYGCRESLVDG HHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH IKRATDVMVAGKVAVVCGYGDVGKGCAQSLRGMGAQVVVTEIDPICALQAAMEGYRVLTV HHHHHHEEEECCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEE EDTLGWADIYVTTTGNCNIIRIEHMEKMKDQAIVCNIGHFDNEIQVHKLQTYPGIRHLNI ECCCCEEEEEEEECCCEEEEEEHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEECC KPQVDRYTFPSGNSLYLLAEGRLVNLGCATGHPSFVMSNSFANQVLAQLELWNTRKDRSV CCCCCCEECCCCCEEEEEECCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHCCCCCCCC GVEVLPKVLDEEVARLHLAKIGCKLTVLRPEQADYIGVPVEGPYKPDFYRY CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure MFSETEQYKVRDIGLADFGRRELDIAEHEMPGLMAVREKYAAARPLEGVRIMGSLHMTVQ CCCCCCCEEEEECCCHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHH TAVLIETLTALGASVRWASCNIFSTQDHAAAAIAKSGTPVFAWKGETLREYWDCTWKAMN HHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHCCCCEEEEECCHHHHHHHCCEEEECC FPDGLGPQLIVDDGGDATLLIHRGYEMEEGSDWVDTPSESEEEEVVKALLKKIAAATPGI CCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH FHRWLPELKGVSEETTTGVHRLYQMQAAGRLLIPAINVNDSVTKSKFDNLYGCRESLVDG HHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH IKRATDVMVAGKVAVVCGYGDVGKGCAQSLRGMGAQVVVTEIDPICALQAAMEGYRVLTV HHHHHHEEEECCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEE EDTLGWADIYVTTTGNCNIIRIEHMEKMKDQAIVCNIGHFDNEIQVHKLQTYPGIRHLNI ECCCCEEEEEEEECCCEEEEEEHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEECC KPQVDRYTFPSGNSLYLLAEGRLVNLGCATGHPSFVMSNSFANQVLAQLELWNTRKDRSV CCCCCCEECCCCCEEEEEECCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHCCCCCCCC GVEVLPKVLDEEVARLHLAKIGCKLTVLRPEQADYIGVPVEGPYKPDFYRY CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA