Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735567

Identifier: 187735567

GI number: 187735567

Start: 1279869

End: 1281134

Strand: Direct

Name: 187735567

Synonym: Amuc_1072

Alternate gene names: NA

Gene position: 1279869-1281134 (Clockwise)

Preceding gene: 187735566

Following gene: 187735568

Centisome position: 48.04

GC content: 52.45

Gene sequence:

>1266_bases
ATGATGAAATATGCTGTGATCGGAGCCGGGGTTTCCGGATTGTCCATGGCCGGAATGTTGCTGAAGAAAGGGCATGAGGT
AGTCGTTTATGAGAGGGACTCCCGGCCCGGCGGCCTGATTAAATGCACGGAAGTACAGGGGAACCTGTATCATCGTGTGG
GAGGCCATGTGTTCAATTCCCGGCGGCAGGAAGTGCTGGACTGGTTTTGGTCCCGGTTTGACAGGGAGCGCGATTTTGTT
TCCGCCCGGAGACGGGCTGTTATTTCCCTGGAGGGCGGGGCTGTGGTGGATTATCCCATTGAGAACCACCTCGACCAGTT
TCCCGAGGCCGTCCGTTCCTCCATCGTCCATGAGCTGCTGGAACTTTACAGGAATCCTCCCGCGGAGCCCCGCTCCCTGG
GTGAGTTTTTTCTGAACCGTTTCGGAAAAACCCTGAACAGCCTTTATTTTACGCCGTACAATAACAAAGTGTGGAGGCAG
GATATCAGCCAAATTGCCATGGATTGGCTGGAAGACAAGCTTCCCATGCCGAGCGTGGCGGAAATCCTGTTGAACAATAT
TGGGCACATCAATGAAAGCGCCATGGTGCACAGTTCTTTCTTTTATGCGAAAAACGGCGGTTCCCAGTTTCTGGCGGATA
CGCTGGCTCGCGGCCTCAAGGTCAGGTATCGGCAGGAAGCTGTAAATATCCTCCCGAAGGACGGGAAATGGCTCGTACAG
GGAGAATTGTTTGACAGAGTTGTCTTTACGGGGAATGTCAGGCAGCTTGGGGATTGTTTTCCCTGCATGGATGAATTGCG
GCCGTTTTTCCCCCGGATTTCAGAATTGCGCTCTCACGGAACCACTTCCGTGCTTTGCCGGATTTCCCCCAATGATTACA
GCTGGATTTACATGCCCTCTCCATCCCACCGCTCTCACCGGATCATTTGCACGGGGAATTTTTCCAGAAATAATAATAAC
GGGGACATCACCACCGCGACTATTGAATTTTCCGAGCAAATGATGGAAGGGGAAATCAGGCGCCAGCTGGAGCTTATTCC
CTTTTCCCCTGTGTATCTGGCCCATCACTGGGAAGAATATACCTATCCCGTTCAGGATGTTTCCAGCCGAACCCTCATAC
GGGAACTAAAGGAGTGCCTGGAACCGAAAGGCATTTATTTATTAGGCCGTTTTGCGGAGTGGGAATACTACAATATGGAT
GCGGCCATGGGGGCGGCCCTTGATTTGGATAAAAGGCTGGCTGCGGAGCAGATGACACGGGGATAA

Upstream 100 bases:

>100_bases
AAGCTGCTTGCCTCCTTTCCGGAGGAATACCTGTATCTCCATCCCGTGAAATTGTCCCGTTTCGCCAGATAGTGGCGTCC
ATAAATTGTTTTTTTATCCC

Downstream 100 bases:

>100_bases
GTCAAATTCTGGACATTGTGGTGTATTTGAACGGGGGATTGTAAATCCGCCTGTTTTTAAAAAAGTTTGGATATAGTTAT
AAAAAGATAACTATAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: UDP-Galactopyranose Mutase; FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Amine Oxidase Family Protein; Oxidoreductase; Nucleotidyl-Sugar Pyranose Mutase; Protoporphyrinogen Oxidase-Like Protein; Flavin Containing Amine Oxidoreductase Family Protein; Flavin-Containing Amine Oxidoreductase Family Protein; Oxidase

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNSRRQEVLDWFWSRFDRERDFV
SARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELLELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQ
DISQIAMDWLEDKLPMPSVAEILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ
GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPSPSHRSHRIICTGNFSRNNNN
GDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEYTYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMD
AAMGAALDLDKRLAAEQMTRG

Sequences:

>Translated_421_residues
MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNSRRQEVLDWFWSRFDRERDFV
SARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELLELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQ
DISQIAMDWLEDKLPMPSVAEILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ
GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPSPSHRSHRIICTGNFSRNNNN
GDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEYTYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMD
AAMGAALDLDKRLAAEQMTRG
>Mature_421_residues
MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNSRRQEVLDWFWSRFDRERDFV
SARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELLELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQ
DISQIAMDWLEDKLPMPSVAEILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ
GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPSPSHRSHRIICTGNFSRNNNN
GDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEYTYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMD
AAMGAALDLDKRLAAEQMTRG

Specific function: Unknown

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48410; Mature: 48410

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNS
CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHHCHHHHHH
RRQEVLDWFWSRFDRERDFVSARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELL
HHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHH
ELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQDISQIAMDWLEDKLPMPSVA
HHHCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
EILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ
HHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPS
CHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECC
PSHRSHRIICTGNFSRNNNNGDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEY
CCCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
TYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMDAAMGAALDLDKRLAAEQMTR
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNS
CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHHCHHHHHH
RRQEVLDWFWSRFDRERDFVSARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELL
HHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHH
ELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQDISQIAMDWLEDKLPMPSVA
HHHCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
EILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ
HHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPS
CHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECC
PSHRSHRIICTGNFSRNNNNGDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEY
CCCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
TYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMDAAMGAALDLDKRLAAEQMTR
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA