Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735567
Identifier: 187735567
GI number: 187735567
Start: 1279869
End: 1281134
Strand: Direct
Name: 187735567
Synonym: Amuc_1072
Alternate gene names: NA
Gene position: 1279869-1281134 (Clockwise)
Preceding gene: 187735566
Following gene: 187735568
Centisome position: 48.04
GC content: 52.45
Gene sequence:
>1266_bases ATGATGAAATATGCTGTGATCGGAGCCGGGGTTTCCGGATTGTCCATGGCCGGAATGTTGCTGAAGAAAGGGCATGAGGT AGTCGTTTATGAGAGGGACTCCCGGCCCGGCGGCCTGATTAAATGCACGGAAGTACAGGGGAACCTGTATCATCGTGTGG GAGGCCATGTGTTCAATTCCCGGCGGCAGGAAGTGCTGGACTGGTTTTGGTCCCGGTTTGACAGGGAGCGCGATTTTGTT TCCGCCCGGAGACGGGCTGTTATTTCCCTGGAGGGCGGGGCTGTGGTGGATTATCCCATTGAGAACCACCTCGACCAGTT TCCCGAGGCCGTCCGTTCCTCCATCGTCCATGAGCTGCTGGAACTTTACAGGAATCCTCCCGCGGAGCCCCGCTCCCTGG GTGAGTTTTTTCTGAACCGTTTCGGAAAAACCCTGAACAGCCTTTATTTTACGCCGTACAATAACAAAGTGTGGAGGCAG GATATCAGCCAAATTGCCATGGATTGGCTGGAAGACAAGCTTCCCATGCCGAGCGTGGCGGAAATCCTGTTGAACAATAT TGGGCACATCAATGAAAGCGCCATGGTGCACAGTTCTTTCTTTTATGCGAAAAACGGCGGTTCCCAGTTTCTGGCGGATA CGCTGGCTCGCGGCCTCAAGGTCAGGTATCGGCAGGAAGCTGTAAATATCCTCCCGAAGGACGGGAAATGGCTCGTACAG GGAGAATTGTTTGACAGAGTTGTCTTTACGGGGAATGTCAGGCAGCTTGGGGATTGTTTTCCCTGCATGGATGAATTGCG GCCGTTTTTCCCCCGGATTTCAGAATTGCGCTCTCACGGAACCACTTCCGTGCTTTGCCGGATTTCCCCCAATGATTACA GCTGGATTTACATGCCCTCTCCATCCCACCGCTCTCACCGGATCATTTGCACGGGGAATTTTTCCAGAAATAATAATAAC GGGGACATCACCACCGCGACTATTGAATTTTCCGAGCAAATGATGGAAGGGGAAATCAGGCGCCAGCTGGAGCTTATTCC CTTTTCCCCTGTGTATCTGGCCCATCACTGGGAAGAATATACCTATCCCGTTCAGGATGTTTCCAGCCGAACCCTCATAC GGGAACTAAAGGAGTGCCTGGAACCGAAAGGCATTTATTTATTAGGCCGTTTTGCGGAGTGGGAATACTACAATATGGAT GCGGCCATGGGGGCGGCCCTTGATTTGGATAAAAGGCTGGCTGCGGAGCAGATGACACGGGGATAA
Upstream 100 bases:
>100_bases AAGCTGCTTGCCTCCTTTCCGGAGGAATACCTGTATCTCCATCCCGTGAAATTGTCCCGTTTCGCCAGATAGTGGCGTCC ATAAATTGTTTTTTTATCCC
Downstream 100 bases:
>100_bases GTCAAATTCTGGACATTGTGGTGTATTTGAACGGGGGATTGTAAATCCGCCTGTTTTTAAAAAAGTTTGGATATAGTTAT AAAAAGATAACTATAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: UDP-Galactopyranose Mutase; FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Amine Oxidase Family Protein; Oxidoreductase; Nucleotidyl-Sugar Pyranose Mutase; Protoporphyrinogen Oxidase-Like Protein; Flavin Containing Amine Oxidoreductase Family Protein; Flavin-Containing Amine Oxidoreductase Family Protein; Oxidase
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNSRRQEVLDWFWSRFDRERDFV SARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELLELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQ DISQIAMDWLEDKLPMPSVAEILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPSPSHRSHRIICTGNFSRNNNN GDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEYTYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMD AAMGAALDLDKRLAAEQMTRG
Sequences:
>Translated_421_residues MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNSRRQEVLDWFWSRFDRERDFV SARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELLELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQ DISQIAMDWLEDKLPMPSVAEILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPSPSHRSHRIICTGNFSRNNNN GDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEYTYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMD AAMGAALDLDKRLAAEQMTRG >Mature_421_residues MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNSRRQEVLDWFWSRFDRERDFV SARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELLELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQ DISQIAMDWLEDKLPMPSVAEILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPSPSHRSHRIICTGNFSRNNNN GDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEYTYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMD AAMGAALDLDKRLAAEQMTRG
Specific function: Unknown
COG id: COG1232
COG function: function code H; Protoporphyrinogen oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48410; Mature: 48410
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNS CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHHCHHHHHH RRQEVLDWFWSRFDRERDFVSARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELL HHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHH ELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQDISQIAMDWLEDKLPMPSVA HHHCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHH EILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ HHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPS CHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECC PSHRSHRIICTGNFSRNNNNGDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEY CCCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH TYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMDAAMGAALDLDKRLAAEQMTR CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHCC G C >Mature Secondary Structure MMKYAVIGAGVSGLSMAGMLLKKGHEVVVYERDSRPGGLIKCTEVQGNLYHRVGGHVFNS CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCHHHHHCHHHHHH RRQEVLDWFWSRFDRERDFVSARRRAVISLEGGAVVDYPIENHLDQFPEAVRSSIVHELL HHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHH ELYRNPPAEPRSLGEFFLNRFGKTLNSLYFTPYNNKVWRQDISQIAMDWLEDKLPMPSVA HHHCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHH EILLNNIGHINESAMVHSSFFYAKNGGSQFLADTLARGLKVRYRQEAVNILPKDGKWLVQ HHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE GELFDRVVFTGNVRQLGDCFPCMDELRPFFPRISELRSHGTTSVLCRISPNDYSWIYMPS CHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECC PSHRSHRIICTGNFSRNNNNGDITTATIEFSEQMMEGEIRRQLELIPFSPVYLAHHWEEY CCCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH TYPVQDVSSRTLIRELKECLEPKGIYLLGRFAEWEYYNMDAAMGAALDLDKRLAAEQMTR CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA