Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735558

Identifier: 187735558

GI number: 187735558

Start: 1269356

End: 1270381

Strand: Reverse

Name: 187735558

Synonym: Amuc_1063

Alternate gene names: NA

Gene position: 1270381-1269356 (Counterclockwise)

Preceding gene: 187735559

Following gene: 187735557

Centisome position: 47.69

GC content: 56.04

Gene sequence:

>1026_bases
ATGAACCAGCACACGCGCAACATCATTGTGGATTCCCTCATCCTGGTAGCTTTCAGCTCCCTCCTCGGCGGTCTCAGCCT
GTTGGTCTCCAAATCTTTCTCCGGAGATCCCAACCCGGCCCTGGACCTTATCACCGTAATGAAGAAAGCGGAGGCCAAAG
AAGTCAACGCTTCCTCCGAACAGGAGGAGAAGGAAGCCCGAGTCAAGGGAATGAAGGAATTCGAACAAACCCTGAAGGAA
GGGGAAGAACTGGCTGCGGCAGAAGGAAAGGCTTTTGTCAACATGACGGATCCCCATGGCAGAACTCCTGTCATGTGGGT
ATGCTACGCCAACTACAACAACATTGAGACCACGCTGAAGCTGGAAGCCACTCGGGCCCCCTATCTGGACCGGCTTCTGG
AAGACCCCCGCGTGGAAATCGACCGGAAGGACAAGGACGGGTGGACCGCGCTGCACTGGGCTTCCTGGAGCGGGCTGGAC
CGCCTGTCCGACATGTTGATTGAAAGGAAAGCAGACATCAACAACCGGGAGGGCAACGGCTTTACGCCCCTCATGCTGGC
AGCCATGCGCGGCAATTTCCAGGTGGCGGCCCTGCTGCTGGAAAAAGGAGCGGATATGACTGCCGTCAACAAATTCGGGA
AAAACGCCCTTCAACTGGCGGAAGAAGGAGCTCTCGCTTATCAATCCAGCTTTGACCTCACCAAGACGGAAGTTTCCAAA
GCCCCGGTGGATTCCTTCATCCGTGCTTATGAAAAGGCCGTGGCCGGCCTGCCGCCCGAACATGCCCCGGAATTCATGGA
AGCCATGAAAAAAGCCGTGGGACGCCAGTCTTTCGTGGAAACAGGGTACGTCCTCCAGCTCATCACGCGCTCCCTGAGCT
CCAAAAACCTGCTCACGGAAGAACAGTCCGGTAAATTCCGGGAGGAAATCACCGGAGCAATCGCGGAAAACTCCCGGATC
ATTGATGTCCGCGGCGTAGCTTTTGAACACACTGTGGACCTGCTCCGCAAAGCGGCGGAAAAATAA

Upstream 100 bases:

>100_bases
AGACGCGGCATCGCCACCCATCAGCGCCATTGAAGCGGAAACGGATCCCGCCCTGACGGCGGAAGAACTTACGGAAGCCA
ACTCCTGACCTTACGAGACC

Downstream 100 bases:

>100_bases
CGGCCTTTCCTTCAGGGTTCAGACATCCGCCACTTTTGCTCTTGACGCTTTCACGGCTCCTTTCTAGGATTCGCGGCATA
CCATGGTTAGAGCATTGCGC

Product: Ankyrin

Products: NA

Alternate protein names: Ankyrin Repeat-Containing Protein

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNQHTRNIIVDSLILVAFSSLLGGLSLLVSKSFSGDPNPALDLITVMKKAEAKEVNASSEQEEKEARVKGMKEFEQTLKE
GEELAAAEGKAFVNMTDPHGRTPVMWVCYANYNNIETTLKLEATRAPYLDRLLEDPRVEIDRKDKDGWTALHWASWSGLD
RLSDMLIERKADINNREGNGFTPLMLAAMRGNFQVAALLLEKGADMTAVNKFGKNALQLAEEGALAYQSSFDLTKTEVSK
APVDSFIRAYEKAVAGLPPEHAPEFMEAMKKAVGRQSFVETGYVLQLITRSLSSKNLLTEEQSGKFREEITGAIAENSRI
IDVRGVAFEHTVDLLRKAAEK

Sequences:

>Translated_341_residues
MNQHTRNIIVDSLILVAFSSLLGGLSLLVSKSFSGDPNPALDLITVMKKAEAKEVNASSEQEEKEARVKGMKEFEQTLKE
GEELAAAEGKAFVNMTDPHGRTPVMWVCYANYNNIETTLKLEATRAPYLDRLLEDPRVEIDRKDKDGWTALHWASWSGLD
RLSDMLIERKADINNREGNGFTPLMLAAMRGNFQVAALLLEKGADMTAVNKFGKNALQLAEEGALAYQSSFDLTKTEVSK
APVDSFIRAYEKAVAGLPPEHAPEFMEAMKKAVGRQSFVETGYVLQLITRSLSSKNLLTEEQSGKFREEITGAIAENSRI
IDVRGVAFEHTVDLLRKAAEK
>Mature_341_residues
MNQHTRNIIVDSLILVAFSSLLGGLSLLVSKSFSGDPNPALDLITVMKKAEAKEVNASSEQEEKEARVKGMKEFEQTLKE
GEELAAAEGKAFVNMTDPHGRTPVMWVCYANYNNIETTLKLEATRAPYLDRLLEDPRVEIDRKDKDGWTALHWASWSGLD
RLSDMLIERKADINNREGNGFTPLMLAAMRGNFQVAALLLEKGADMTAVNKFGKNALQLAEEGALAYQSSFDLTKTEVSK
APVDSFIRAYEKAVAGLPPEHAPEFMEAMKKAVGRQSFVETGYVLQLITRSLSSKNLLTEEQSGKFREEITGAIAENSRI
IDVRGVAFEHTVDLLRKAAEK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596917, Length=150, Percent_Identity=29.3333333333333, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24650843, Length=153, Percent_Identity=30.0653594771242, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37784; Mature: 37784

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQHTRNIIVDSLILVAFSSLLGGLSLLVSKSFSGDPNPALDLITVMKKAEAKEVNASSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
QEEKEARVKGMKEFEQTLKEGEELAAAEGKAFVNMTDPHGRTPVMWVCYANYNNIETTLK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEE
LEATRAPYLDRLLEDPRVEIDRKDKDGWTALHWASWSGLDRLSDMLIERKADINNREGNG
EECCCCHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
FTPLMLAAMRGNFQVAALLLEKGADMTAVNKFGKNALQLAEEGALAYQSSFDLTKTEVSK
CHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHCCHHHHCCCCCHHHHHHH
APVDSFIRAYEKAVAGLPPEHAPEFMEAMKKAVGRQSFVETGYVLQLITRSLSSKNLLTE
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC
EQSGKFREEITGAIAENSRIIDVRGVAFEHTVDLLRKAAEK
HHCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQHTRNIIVDSLILVAFSSLLGGLSLLVSKSFSGDPNPALDLITVMKKAEAKEVNASSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
QEEKEARVKGMKEFEQTLKEGEELAAAEGKAFVNMTDPHGRTPVMWVCYANYNNIETTLK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEE
LEATRAPYLDRLLEDPRVEIDRKDKDGWTALHWASWSGLDRLSDMLIERKADINNREGNG
EECCCCHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
FTPLMLAAMRGNFQVAALLLEKGADMTAVNKFGKNALQLAEEGALAYQSSFDLTKTEVSK
CHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHCCHHHHCCCCCHHHHHHH
APVDSFIRAYEKAVAGLPPEHAPEFMEAMKKAVGRQSFVETGYVLQLITRSLSSKNLLTE
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC
EQSGKFREEITGAIAENSRIIDVRGVAFEHTVDLLRKAAEK
HHCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA