Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735520
Identifier: 187735520
GI number: 187735520
Start: 1217203
End: 1217976
Strand: Reverse
Name: 187735520
Synonym: Amuc_1025
Alternate gene names: NA
Gene position: 1217976-1217203 (Counterclockwise)
Preceding gene: 187735523
Following gene: 187735519
Centisome position: 45.72
GC content: 54.52
Gene sequence:
>774_bases ATGAGCGAAGAACTGGTAGAAGAATTCATTACAGTTGAATCCATCTTTGTCCGCGGACGCAATTGTCTGGCGCTCAGGTC AAAATTTTCTCCACTGTTTACGGATTACTACCTTCACCTCATGCAGTACGGCCTGCGCAACGAAGAACTCTACGACAGCC TACTGAAAGAACTCATGGCCTATTTCACCCTTTACATGGTCGCACGGCCCTGGGCGGAGCAACATGCCTGGACAGTCAAT CTCCGGACGCCTGCCGTCGCCAACCTGTTTGTCACCGGTTCTTCCCTGACGGAATCCGTCGTGGGGCGCGTCTTCACACA GGACATTAAGGAACCTGAAGAAAACACGCTGTATTCCACCCTGCTCCGCAAGGGGTTTGAACCGCAATACTCCGTCGTAC CCATTCCGGGAACGTCTCCGGCCCGATGGGTGGAGGAATTCTACAGGCAAAGCGAACAGAGAAACGCCCGCTGCATTGAG CTCCCGGATGAATGCTACACCATGGTGACGGCCCAGCCTGACGCGGATGAAGAATGGCTTGCTTCCCTCACCCGGGAGAA AATGGCCCATCTGGAAGAAGATGAAAATACCCGAGTGCTGGAAACGCGCCGGTTCCGCTTTTACTGCGGCTGCACGCTGG ACCGCATCCTGCCCACGCTCAAGACCCTTCAGGAAAACAAGGAAGACCTGTTCCAGGGAGAAGAGGAGCTGGAAGTCACG TGCCCCAGATGCGCCGCCATTTACCGTGTCACGAAAGAAAATCTGGAAGATTGA
Upstream 100 bases:
>100_bases TGCCGGGAAAAAGACCGCCGCCGCGCCTACCTGTCATGATAGACCCTAATGACAGGAGGAACGGTTGATTTTCCACAAAG GAAGACCGAACTTGAATGGC
Downstream 100 bases:
>100_bases GACATACATGATTTCTTTCTGACAATTAGTCTTTTCGGCAACGAACTTCGTGCTTAAACTTTCCTTGTGCCGACTTGTCC GAAGTGTTTACATAATTTCC
Product: Disulfide bond chaperones of the HSP33 family-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSEELVEEFITVESIFVRGRNCLALRSKFSPLFTDYYLHLMQYGLRNEELYDSLLKELMAYFTLYMVARPWAEQHAWTVN LRTPAVANLFVTGSSLTESVVGRVFTQDIKEPEENTLYSTLLRKGFEPQYSVVPIPGTSPARWVEEFYRQSEQRNARCIE LPDECYTMVTAQPDADEEWLASLTREKMAHLEEDENTRVLETRRFRFYCGCTLDRILPTLKTLQENKEDLFQGEEELEVT CPRCAAIYRVTKENLED
Sequences:
>Translated_257_residues MSEELVEEFITVESIFVRGRNCLALRSKFSPLFTDYYLHLMQYGLRNEELYDSLLKELMAYFTLYMVARPWAEQHAWTVN LRTPAVANLFVTGSSLTESVVGRVFTQDIKEPEENTLYSTLLRKGFEPQYSVVPIPGTSPARWVEEFYRQSEQRNARCIE LPDECYTMVTAQPDADEEWLASLTREKMAHLEEDENTRVLETRRFRFYCGCTLDRILPTLKTLQENKEDLFQGEEELEVT CPRCAAIYRVTKENLED >Mature_256_residues SEELVEEFITVESIFVRGRNCLALRSKFSPLFTDYYLHLMQYGLRNEELYDSLLKELMAYFTLYMVARPWAEQHAWTVNL RTPAVANLFVTGSSLTESVVGRVFTQDIKEPEENTLYSTLLRKGFEPQYSVVPIPGTSPARWVEEFYRQSEQRNARCIEL PDECYTMVTAQPDADEEWLASLTREKMAHLEEDENTRVLETRRFRFYCGCTLDRILPTLKTLQENKEDLFQGEEELEVTC PRCAAIYRVTKENLED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30093; Mature: 29962
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEELVEEFITVESIFVRGRNCLALRSKFSPLFTDYYLHLMQYGLRNEELYDSLLKELMA CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YFTLYMVARPWAEQHAWTVNLRTPAVANLFVTGSSLTESVVGRVFTQDIKEPEENTLYST HHHHHHHHCCHHHHCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHH LLRKGFEPQYSVVPIPGTSPARWVEEFYRQSEQRNARCIELPDECYTMVTAQPDADEEWL HHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHEEEECCCCCCHHHH ASLTREKMAHLEEDENTRVLETRRFRFYCGCTLDRILPTLKTLQENKEDLFQGEEELEVT HHHHHHHHHHCCCCCCCCHHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHHCCCHHHHEE CPRCAAIYRVTKENLED CHHHHHHHHHHHHHCCC >Mature Secondary Structure SEELVEEFITVESIFVRGRNCLALRSKFSPLFTDYYLHLMQYGLRNEELYDSLLKELMA CHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YFTLYMVARPWAEQHAWTVNLRTPAVANLFVTGSSLTESVVGRVFTQDIKEPEENTLYST HHHHHHHHCCHHHHCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHH LLRKGFEPQYSVVPIPGTSPARWVEEFYRQSEQRNARCIELPDECYTMVTAQPDADEEWL HHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHEEEECCCCCCHHHH ASLTREKMAHLEEDENTRVLETRRFRFYCGCTLDRILPTLKTLQENKEDLFQGEEELEVT HHHHHHHHHHCCCCCCCCHHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHHCCCHHHHEE CPRCAAIYRVTKENLED CHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA