Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735519

Identifier: 187735519

GI number: 187735519

Start: 1216516

End: 1217136

Strand: Reverse

Name: 187735519

Synonym: Amuc_1024

Alternate gene names: NA

Gene position: 1217136-1216516 (Counterclockwise)

Preceding gene: 187735520

Following gene: 187735518

Centisome position: 45.69

GC content: 58.13

Gene sequence:

>621_bases
GTGCCGACTTGTCCGAAGTGTTTACATAATTTCCACCGCGGGGCGGAATCATTGTGCCCTCACTGCGGTTTTTCCCTGGA
AAACCTGGACAAAAAATACGGCAAAGACGCCATACCCTACCGCCGCGTATGCGACAACGCCGGCGCTCTCCGACAACAGG
ACCGCATAAAGCTGAATGCCCTGCTGGAGAAACTGGAACGCCGCATCCCCCCCGTTCTCCTGTCCGTCTATTTCCCCAAC
ATCCTGGAGCCCTTTTCCCTTATTCCGCACAGTTTCTGGACGATGAACCACCTGACGGTGGATGAGGCCGGCTTCCCCAA
CCATCAGGGACCGCTGGATCCCCAGTGGCTCCTGGTTCTGGTGCTGGACGTGCGCACGGACACGGCCTGCTTCATGTGGG
GCTATGAACTGGACCCTTATGTAGAGCCGGACCTGATCAACAAATCCATCATGAAAGCCCGCATTCCCCTGCGGGAAAGC
ATGCTGCTCCAGGCTGCGGGGTCCATCATGAAAAACGCCGTCCAGCTCGTAGCCAGGAAAGCGCGCTCCAAAGTCAGGCA
TCCCATGCGCTACGGATTAACGCTTCCCACCCCCGAGGACCGGAAAGGAGGAGGCGCATGA

Upstream 100 bases:

>100_bases
TTACCGTGTCACGAAAGAAAATCTGGAAGATTGAGACATACATGATTTCTTTCTGACAATTAGTCTTTTCGGCAACGAAC
TTCGTGCTTAAACTTTCCTT

Downstream 100 bases:

>100_bases
ACCCCTTTTTGTTCCCATGCCTGCTGGCGGCGTCCATTTTTCCGGCTCCCGCCCAGGAATTACCCGCCCTGAAATGGACC
AACCGCGACCAGCAATCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MPTCPKCLHNFHRGAESLCPHCGFSLENLDKKYGKDAIPYRRVCDNAGALRQQDRIKLNALLEKLERRIPPVLLSVYFPN
ILEPFSLIPHSFWTMNHLTVDEAGFPNHQGPLDPQWLLVLVLDVRTDTACFMWGYELDPYVEPDLINKSIMKARIPLRES
MLLQAAGSIMKNAVQLVARKARSKVRHPMRYGLTLPTPEDRKGGGA

Sequences:

>Translated_206_residues
MPTCPKCLHNFHRGAESLCPHCGFSLENLDKKYGKDAIPYRRVCDNAGALRQQDRIKLNALLEKLERRIPPVLLSVYFPN
ILEPFSLIPHSFWTMNHLTVDEAGFPNHQGPLDPQWLLVLVLDVRTDTACFMWGYELDPYVEPDLINKSIMKARIPLRES
MLLQAAGSIMKNAVQLVARKARSKVRHPMRYGLTLPTPEDRKGGGA
>Mature_205_residues
PTCPKCLHNFHRGAESLCPHCGFSLENLDKKYGKDAIPYRRVCDNAGALRQQDRIKLNALLEKLERRIPPVLLSVYFPNI
LEPFSLIPHSFWTMNHLTVDEAGFPNHQGPLDPQWLLVLVLDVRTDTACFMWGYELDPYVEPDLINKSIMKARIPLRESM
LLQAAGSIMKNAVQLVARKARSKVRHPMRYGLTLPTPEDRKGGGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23401; Mature: 23269

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTCPKCLHNFHRGAESLCPHCGFSLENLDKKYGKDAIPYRRVCDNAGALRQQDRIKLNA
CCCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHH
LLEKLERRIPPVLLSVYFPNILEPFSLIPHSFWTMNHLTVDEAGFPNHQGPLDPQWLLVL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHCCCEEECCCCCCCCCCCCCHHEEHHH
VLDVRTDTACFMWGYELDPYVEPDLINKSIMKARIPLRESMLLQAAGSIMKNAVQLVARK
HHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ARSKVRHPMRYGLTLPTPEDRKGGGA
HHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTCPKCLHNFHRGAESLCPHCGFSLENLDKKYGKDAIPYRRVCDNAGALRQQDRIKLNA
CCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHH
LLEKLERRIPPVLLSVYFPNILEPFSLIPHSFWTMNHLTVDEAGFPNHQGPLDPQWLLVL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHCCCEEECCCCCCCCCCCCCHHEEHHH
VLDVRTDTACFMWGYELDPYVEPDLINKSIMKARIPLRESMLLQAAGSIMKNAVQLVARK
HHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ARSKVRHPMRYGLTLPTPEDRKGGGA
HHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA