Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735523

Identifier: 187735523

GI number: 187735523

Start: 1220845

End: 1221495

Strand: Reverse

Name: 187735523

Synonym: Amuc_1028

Alternate gene names: NA

Gene position: 1221495-1220845 (Counterclockwise)

Preceding gene: 187735524

Following gene: 187735520

Centisome position: 45.85

GC content: 54.07

Gene sequence:

>651_bases
ATGAAGAGTCTTCTTTTCATTTCAACATTTTTATTGTGTATTTCCGGAGTACAGGCGGCGTCCACTCTGTATGAAACCCA
GTTTCATCAAACCAGCATTACTACTGGGAGCGATTTTCTGGAAGATGCTTCCGTCACTCTCACCACTCCTTCCACCGCCC
TCTCCAACAATCTGGCAGCGGATCTTCTTGTTCCCAACCTCCAAATGAATGGAAATGAAACCGGTTGGACTGTCACTTTT
TCCTTCACAGCTACGCAGGACATCGTCCTTTCTTCCCTCAGCCTAGGTTTTCAATTCGTCAATGCAAGCGGGGAGCGTCA
TAGCAATACGGATACTAAAGCGGGAACCGCTACCGTTACGCTGACTGCCGGAGATTCCTCCGCCACGGCTGACCTGAGCT
TTGAGCGAGTCCAGGCTGATAAAGACGGCACGCCGACGGCCGATATCCAGGAAGCCAGCTTCAATACCCCGGTCACAGTT
AGTGCGGGGGAAACCTTTACCCTCACCGTGAATGCCAAGGCTCCCAACACCGGAGGAACCTTCCTGGGGCTTTCCCAGTT
GAATCTTCAGGGGGACACGGTACCGGAGCCGGCGACGGCCTCCCTCAGCCTGCTTGGCATGGCCGCCCTGCTTCTGCGCC
GCCGGGTATAA

Upstream 100 bases:

>100_bases
ATAAAATTTTATTTTCATAAATCATTAGTAATGTGTGTATTTATCCATTCCCATTTTCCTATCCTCTGTCACCGGATATC
TAATCCGCTAACATGGAGCT

Downstream 100 bases:

>100_bases
CCGGAAAAGCGTTGAAGTTCTGATTTTTTCCTCTGTCCGAACAGGGCTGTTCCCGGAAACAGCCCTGTTTTTTGTTGAGA
AATCCTCTCAGCTTCCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKSLLFISTFLLCISGVQAASTLYETQFHQTSITTGSDFLEDASVTLTTPSTALSNNLAADLLVPNLQMNGNETGWTVTF
SFTATQDIVLSSLSLGFQFVNASGERHSNTDTKAGTATVTLTAGDSSATADLSFERVQADKDGTPTADIQEASFNTPVTV
SAGETFTLTVNAKAPNTGGTFLGLSQLNLQGDTVPEPATASLSLLGMAALLLRRRV

Sequences:

>Translated_216_residues
MKSLLFISTFLLCISGVQAASTLYETQFHQTSITTGSDFLEDASVTLTTPSTALSNNLAADLLVPNLQMNGNETGWTVTF
SFTATQDIVLSSLSLGFQFVNASGERHSNTDTKAGTATVTLTAGDSSATADLSFERVQADKDGTPTADIQEASFNTPVTV
SAGETFTLTVNAKAPNTGGTFLGLSQLNLQGDTVPEPATASLSLLGMAALLLRRRV
>Mature_216_residues
MKSLLFISTFLLCISGVQAASTLYETQFHQTSITTGSDFLEDASVTLTTPSTALSNNLAADLLVPNLQMNGNETGWTVTF
SFTATQDIVLSSLSLGFQFVNASGERHSNTDTKAGTATVTLTAGDSSATADLSFERVQADKDGTPTADIQEASFNTPVTV
SAGETFTLTVNAKAPNTGGTFLGLSQLNLQGDTVPEPATASLSLLGMAALLLRRRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22566; Mature: 22566

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLFISTFLLCISGVQAASTLYETQFHQTSITTGSDFLEDASVTLTTPSTALSNNLAA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCEEECCCCCHHHCCCEEEEECCCHHHHCCCEE
DLLVPNLQMNGNETGWTVTFSFTATQDIVLSSLSLGFQFVNASGERHSNTDTKAGTATVT
EEEECCEEECCCCCCEEEEEEECCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCEEEEE
LTAGDSSATADLSFERVQADKDGTPTADIQEASFNTPVTVSAGETFTLTVNAKAPNTGGT
EEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCC
FLGLSQLNLQGDTVPEPATASLSLLGMAALLLRRRV
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLLFISTFLLCISGVQAASTLYETQFHQTSITTGSDFLEDASVTLTTPSTALSNNLAA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCEEECCCCCHHHCCCEEEEECCCHHHHCCCEE
DLLVPNLQMNGNETGWTVTFSFTATQDIVLSSLSLGFQFVNASGERHSNTDTKAGTATVT
EEEECCEEECCCCCCEEEEEEECCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCEEEEE
LTAGDSSATADLSFERVQADKDGTPTADIQEASFNTPVTVSAGETFTLTVNAKAPNTGGT
EEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCC
FLGLSQLNLQGDTVPEPATASLSLLGMAALLLRRRV
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA