Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735518
Identifier: 187735518
GI number: 187735518
Start: 1215461
End: 1216519
Strand: Reverse
Name: 187735518
Synonym: Amuc_1023
Alternate gene names: NA
Gene position: 1216519-1215461 (Counterclockwise)
Preceding gene: 187735519
Following gene: 187735517
Centisome position: 45.66
GC content: 60.25
Gene sequence:
>1059_bases ATGAACCCCTTTTTGTTCCCATGCCTGCTGGCGGCGTCCATTTTTCCGGCTCCCGCCCAGGAATTACCCGCCCTGAAATG GACCAACCGCGACCAGCAATCCCTGATGAGAGGCGCGTGGTGGAATGCCAACCCTCCCTTGCTGCCCCCTGTGGATGCGG CAGCGGCTCCCTCCGACCCCATGCCGGAACCCGCCGCCAATGCAAACTCCCCCGCAGTGGATCCCATTCCGGAGGACTTT ACGGACGTCAATGAATATTTCCTGCCGGACTACATCCGCACCTCCACAGGCCTGATTGACCCCCAGAAGCTTCTTGCGGA AGTGGAAAGCAATGACGTCATCGAACTTATCAAGCTCATCAAATCCCGCTACAACGTCAACCTGTTCGTCAGCATCTTCG CGGCCGGGCAGAAAGTCCCCCCTTCCGTCAATGCTCCCACCATCGCCCGCCAGATATTCAGGAACAAGGAGCGCAACCTG CTGCTCCATTTCCACATGGGGGATATTAAAAGCGCCCAGATCGCACTGGATCCGGAGCTGAGCTCCCAGCTTGGGGATGC GGGACGGAGGGATCTCCTGTACCAGGTGAAGCAGGACGCCTCCCGATTCACCAATCCGCAGGACGAACTCATTGAGGCCA TGATTTCCCTGGCCAGAAGAACGGAGGCGGACATGGCATCCGCCCCCAGGCCCACCCTTCCCGCACTGGAGCCTGACAAC CCTGCCAGCATCCCGGAAGCCAACATCACCATCCAGGAACCGGAGGAAACGCAAGAATCCTCCCTCCATGCCATGATGAA AGCCTGGATGACCTTCTCCCTGGCCAATGTAGCCGGCATCATCCTGCACATCTCCGCACTGGCGGCCATAGTGGTGCTCT GGCTGGTCTGGAAAAACAAGAGAGTGGTGCATCTGCTGCCGTCAGAGCCGGACAAGCGCCTGGGCGCTCCCCACGGCGCC TCCCAGAGCCGCCCCGTGAACTACTGCATGCAGGACAGCCGCGGGCCGAACTCCATCGGACGCAGGCAAATGCGCCAGCA CATGCGCGACGTCTCATGA
Upstream 100 bases:
>100_bases CCGTCCAGCTCGTAGCCAGGAAAGCGCGCTCCAAAGTCAGGCATCCCATGCGCTACGGATTAACGCTTCCCACCCCCGAG GACCGGAAAGGAGGAGGCGC
Downstream 100 bases:
>100_bases CAGAATCATCCCCACCCCCCGGAATCCGCGCCTCCCTGAATGAGGCGGGAGAACTGGTACTTACCGCGGTGAACGCTCCC CCGGAAGCCGTCATCCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MNPFLFPCLLAASIFPAPAQELPALKWTNRDQQSLMRGAWWNANPPLLPPVDAAAAPSDPMPEPAANANSPAVDPIPEDF TDVNEYFLPDYIRTSTGLIDPQKLLAEVESNDVIELIKLIKSRYNVNLFVSIFAAGQKVPPSVNAPTIARQIFRNKERNL LLHFHMGDIKSAQIALDPELSSQLGDAGRRDLLYQVKQDASRFTNPQDELIEAMISLARRTEADMASAPRPTLPALEPDN PASIPEANITIQEPEETQESSLHAMMKAWMTFSLANVAGIILHISALAAIVVLWLVWKNKRVVHLLPSEPDKRLGAPHGA SQSRPVNYCMQDSRGPNSIGRRQMRQHMRDVS
Sequences:
>Translated_352_residues MNPFLFPCLLAASIFPAPAQELPALKWTNRDQQSLMRGAWWNANPPLLPPVDAAAAPSDPMPEPAANANSPAVDPIPEDF TDVNEYFLPDYIRTSTGLIDPQKLLAEVESNDVIELIKLIKSRYNVNLFVSIFAAGQKVPPSVNAPTIARQIFRNKERNL LLHFHMGDIKSAQIALDPELSSQLGDAGRRDLLYQVKQDASRFTNPQDELIEAMISLARRTEADMASAPRPTLPALEPDN PASIPEANITIQEPEETQESSLHAMMKAWMTFSLANVAGIILHISALAAIVVLWLVWKNKRVVHLLPSEPDKRLGAPHGA SQSRPVNYCMQDSRGPNSIGRRQMRQHMRDVS >Mature_352_residues MNPFLFPCLLAASIFPAPAQELPALKWTNRDQQSLMRGAWWNANPPLLPPVDAAAAPSDPMPEPAANANSPAVDPIPEDF TDVNEYFLPDYIRTSTGLIDPQKLLAEVESNDVIELIKLIKSRYNVNLFVSIFAAGQKVPPSVNAPTIARQIFRNKERNL LLHFHMGDIKSAQIALDPELSSQLGDAGRRDLLYQVKQDASRFTNPQDELIEAMISLARRTEADMASAPRPTLPALEPDN PASIPEANITIQEPEETQESSLHAMMKAWMTFSLANVAGIILHISALAAIVVLWLVWKNKRVVHLLPSEPDKRLGAPHGA SQSRPVNYCMQDSRGPNSIGRRQMRQHMRDVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39009; Mature: 39009
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFLFPCLLAASIFPAPAQELPALKWTNRDQQSLMRGAWWNANPPLLPPVDAAAAPSDP CCCHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC MPEPAANANSPAVDPIPEDFTDVNEYFLPDYIRTSTGLIDPQKLLAEVESNDVIELIKLI CCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHH KSRYNVNLFVSIFAAGQKVPPSVNAPTIARQIFRNKERNLLLHFHMGDIKSAQIALDPEL HHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECHHH SSQLGDAGRRDLLYQVKQDASRFTNPQDELIEAMISLARRTEADMASAPRPTLPALEPDN HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PASIPEANITIQEPEETQESSLHAMMKAWMTFSLANVAGIILHISALAAIVVLWLVWKNK CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RVVHLLPSEPDKRLGAPHGASQSRPVNYCMQDSRGPNSIGRRQMRQHMRDVS CEEEECCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPFLFPCLLAASIFPAPAQELPALKWTNRDQQSLMRGAWWNANPPLLPPVDAAAAPSDP CCCHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC MPEPAANANSPAVDPIPEDFTDVNEYFLPDYIRTSTGLIDPQKLLAEVESNDVIELIKLI CCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHH KSRYNVNLFVSIFAAGQKVPPSVNAPTIARQIFRNKERNLLLHFHMGDIKSAQIALDPEL HHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECHHH SSQLGDAGRRDLLYQVKQDASRFTNPQDELIEAMISLARRTEADMASAPRPTLPALEPDN HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PASIPEANITIQEPEETQESSLHAMMKAWMTFSLANVAGIILHISALAAIVVLWLVWKNK CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RVVHLLPSEPDKRLGAPHGASQSRPVNYCMQDSRGPNSIGRRQMRQHMRDVS CEEEECCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA