Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735517
Identifier: 187735517
GI number: 187735517
Start: 1214499
End: 1215464
Strand: Reverse
Name: 187735517
Synonym: Amuc_1022
Alternate gene names: NA
Gene position: 1215464-1214499 (Counterclockwise)
Preceding gene: 187735518
Following gene: 187735516
Centisome position: 45.62
GC content: 62.11
Gene sequence:
>966_bases ATGACAGAATCATCCCCACCCCCCGGAATCCGCGCCTCCCTGAATGAGGCGGGAGAACTGGTACTTACCGCGGTGAACGC TCCCCCGGAAGCCGTCATCCGAATAGACGTGAATGCGGACTCTCCCCGCATGCTCTGCACGCAGGGCCGCTATCTGGCTC CGGTGCAGGCCCCGCCCGGCGCGCGCATCCGCTTCCGCCTGTTCCGGGGAAAGCGCGGCATTACAGCCCCGGAAACCTTC ATCATGCCCGGACCTCCTCCCGCCCGGGCCGTACCCTCCACGCTGATTCCCTGCACCCAGGACCGGGACTTCATGATTTA CGACTGGGCGTCCCGGCATGAAGCCGCATGCCGCATCGTGCGCGAAACACACCCGGACCTCCTCTTCATCGGAGACTCCA TCACGCATTTCTGGGGAGGTGCGCCCGTGGATGAACCGCACCGGGACATTTTGCAAAAATCCCCGGAAACATGGAACCTG TGCACGGCGGGAATGCGGGCGGTCAATCTGGGGTTTGGCTACGACCGGGTGGAAAACGCCCTGTGGCGGCTCCGCCACGG AGAACTAGACGGTGCGGAAGACAATGCCGTTTGCGTGGTGCTCCTGGGCACGAACAACCTTGCGGAAAACACGGACGGGG AAATCCTGGAAGGCATTCGTGCCGTCTGCCGGGAAATCACCGGCAAACTGGCAAAAGCCGTCATCATCCTCCAGGGATTT TACCCGCGCAACAGCGCCCGGGAAGGTACGGCGGAACGCATTGCCGGCATCAATCTCCTCCTGAATCGCCTGGCCGCGGA AGAAAATTTCATTTATACGGAACCGGGACGCGTCATGGCTAATAGCGACGGATACGTCCCGGAAGAGCTTTCCAGCGACG GACTGCACCCTTCTGCGGCCGGTTACGCACGCATCGCCGCCGTACTGGCCCCCGTCATCAGACAGGCGGCAGAACGGGAA AAATGA
Upstream 100 bases:
>100_bases GCGCCTCCCAGAGCCGCCCCGTGAACTACTGCATGCAGGACAGCCGCGGGCCGAACTCCATCGGACGCAGGCAAATGCGC CAGCACATGCGCGACGTCTC
Downstream 100 bases:
>100_bases CGCCGGCAAGAAACCGGACCCATCTTCCGGTGTTTTTCTTCATAGAACCCTCAGCGGAACCACAACCATGAACGAACAGG ACGATACAAAACTCTGGCAG
Product: lipolytic protein G-D-S-L family
Products: NA
Alternate protein names: GDSL Family Lipase; Mucin-Desulfating Sulfatase; Acetylhydrolase; 1-Alkyl-2-Acetylglycerophosphocholine Esterase; Exo-1 4-Beta-Glucosidase; Acetylhydrolase Lipase_gdsl Protein; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; 1 4-Beta-D-Glucan Glucohydrolase Cel3D; Glycoside Hydrolase Family 3 Domain Protein; Lipolytic G-D-S-L; GDSL-Like Lipase/Acylhydrolase; Lipolytic GDSL Family
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTESSPPPGIRASLNEAGELVLTAVNAPPEAVIRIDVNADSPRMLCTQGRYLAPVQAPPGARIRFRLFRGKRGITAPETF IMPGPPPARAVPSTLIPCTQDRDFMIYDWASRHEAACRIVRETHPDLLFIGDSITHFWGGAPVDEPHRDILQKSPETWNL CTAGMRAVNLGFGYDRVENALWRLRHGELDGAEDNAVCVVLLGTNNLAENTDGEILEGIRAVCREITGKLAKAVIILQGF YPRNSAREGTAERIAGINLLLNRLAAEENFIYTEPGRVMANSDGYVPEELSSDGLHPSAAGYARIAAVLAPVIRQAAERE K
Sequences:
>Translated_321_residues MTESSPPPGIRASLNEAGELVLTAVNAPPEAVIRIDVNADSPRMLCTQGRYLAPVQAPPGARIRFRLFRGKRGITAPETF IMPGPPPARAVPSTLIPCTQDRDFMIYDWASRHEAACRIVRETHPDLLFIGDSITHFWGGAPVDEPHRDILQKSPETWNL CTAGMRAVNLGFGYDRVENALWRLRHGELDGAEDNAVCVVLLGTNNLAENTDGEILEGIRAVCREITGKLAKAVIILQGF YPRNSAREGTAERIAGINLLLNRLAAEENFIYTEPGRVMANSDGYVPEELSSDGLHPSAAGYARIAAVLAPVIRQAAERE K >Mature_320_residues TESSPPPGIRASLNEAGELVLTAVNAPPEAVIRIDVNADSPRMLCTQGRYLAPVQAPPGARIRFRLFRGKRGITAPETFI MPGPPPARAVPSTLIPCTQDRDFMIYDWASRHEAACRIVRETHPDLLFIGDSITHFWGGAPVDEPHRDILQKSPETWNLC TAGMRAVNLGFGYDRVENALWRLRHGELDGAEDNAVCVVLLGTNNLAENTDGEILEGIRAVCREITGKLAKAVIILQGFY PRNSAREGTAERIAGINLLLNRLAAEENFIYTEPGRVMANSDGYVPEELSSDGLHPSAAGYARIAAVLAPVIRQAAEREK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505585, Length=215, Percent_Identity=32.093023255814, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI225543099, Length=200, Percent_Identity=27, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI225543097, Length=200, Percent_Identity=27, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI4505587, Length=200, Percent_Identity=27, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI296080766, Length=131, Percent_Identity=33.587786259542, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI296080768, Length=137, Percent_Identity=32.1167883211679, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI296080770, Length=125, Percent_Identity=32.8, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24642291, Length=208, Percent_Identity=27.8846153846154, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24642289, Length=208, Percent_Identity=27.8846153846154, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35038; Mature: 34907
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESSPPPGIRASLNEAGELVLTAVNAPPEAVIRIDVNADSPRMLCTQGRYLAPVQAPPG CCCCCCCCCCHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEECCCCEEEECCCCCC ARIRFRLFRGKRGITAPETFIMPGPPPARAVPSTLIPCTQDRDFMIYDWASRHEAACRIV CEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH RETHPDLLFIGDSITHFWGGAPVDEPHRDILQKSPETWNLCTAGMRAVNLGFGYDRVENA HHCCCCEEEECCCHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHCHHEEECCCCHHHHHHH LWRLRHGELDGAEDNAVCVVLLGTNNLAENTDGEILEGIRAVCREITGKLAKAVIILQGF HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECC YPRNSAREGTAERIAGINLLLNRLAAEENFIYTEPGRVMANSDGYVPEELSSDGLHPSAA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCHHHCCCCCCCCHH GYARIAAVLAPVIRQAAEREK HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TESSPPPGIRASLNEAGELVLTAVNAPPEAVIRIDVNADSPRMLCTQGRYLAPVQAPPG CCCCCCCCCHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEECCCCEEEECCCCCC ARIRFRLFRGKRGITAPETFIMPGPPPARAVPSTLIPCTQDRDFMIYDWASRHEAACRIV CEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH RETHPDLLFIGDSITHFWGGAPVDEPHRDILQKSPETWNLCTAGMRAVNLGFGYDRVENA HHCCCCEEEECCCHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHCHHEEECCCCHHHHHHH LWRLRHGELDGAEDNAVCVVLLGTNNLAENTDGEILEGIRAVCREITGKLAKAVIILQGF HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECC YPRNSAREGTAERIAGINLLLNRLAAEENFIYTEPGRVMANSDGYVPEELSSDGLHPSAA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCHHHCCCCCCCCHH GYARIAAVLAPVIRQAAEREK HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA