Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735509
Identifier: 187735509
GI number: 187735509
Start: 1208966
End: 1209196
Strand: Direct
Name: 187735509
Synonym: Amuc_1014
Alternate gene names: NA
Gene position: 1208966-1209196 (Clockwise)
Preceding gene: 187735508
Following gene: 187735510
Centisome position: 45.38
GC content: 54.98
Gene sequence:
>231_bases ATGGACCAGAAAACAACTTATTCCTACCAGCGCACTCCGGGCCTTGACTGCCCCAAATGCGGGGTGTATTTCCCCACGAC CATTCCGGACTTGCTGTCCGGCTCCATCAGGTGCCCTTATTGCGGCCTGACGCTTTACATTGACCGGAAAGAATCAGGCC ATGCCATGCAGGCCCTGGAAAATTTCCAGAACGCATTAGACAAGCAGCTTCCCTCCGCCTCCCTGTCATGA
Upstream 100 bases:
>100_bases ACATGCCTTCCGGCCTGTCCCAATTTCTCCAGCTGGCTTCCAGGCCGCATTATGAGGATGTCCCTTCCCGGGAAAAGAAT GATTAATTGAAAAAAACGAT
Downstream 100 bases:
>100_bases AGAAACCGTTGATTATCCTGTCCGCCGTGCTGTGCATGGTTCTGCCGTCCTTGTCTCCGGCGGAGATGCGGCAGCGGGAA CCCCGCCAGCTTGCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MDQKTTYSYQRTPGLDCPKCGVYFPTTIPDLLSGSIRCPYCGLTLYIDRKESGHAMQALENFQNALDKQLPSASLS
Sequences:
>Translated_76_residues MDQKTTYSYQRTPGLDCPKCGVYFPTTIPDLLSGSIRCPYCGLTLYIDRKESGHAMQALENFQNALDKQLPSASLS >Mature_76_residues MDQKTTYSYQRTPGLDCPKCGVYFPTTIPDLLSGSIRCPYCGLTLYIDRKESGHAMQALENFQNALDKQLPSASLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8450; Mature: 8450
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQKTTYSYQRTPGLDCPKCGVYFPTTIPDLLSGSIRCPYCGLTLYIDRKESGHAMQALE CCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHH NFQNALDKQLPSASLS HHHHHHHHHCCCCCCC >Mature Secondary Structure MDQKTTYSYQRTPGLDCPKCGVYFPTTIPDLLSGSIRCPYCGLTLYIDRKESGHAMQALE CCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHH NFQNALDKQLPSASLS HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA