Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735508

Identifier: 187735508

GI number: 187735508

Start: 1208355

End: 1208951

Strand: Direct

Name: 187735508

Synonym: Amuc_1013

Alternate gene names: NA

Gene position: 1208355-1208951 (Clockwise)

Preceding gene: 187735507

Following gene: 187735509

Centisome position: 45.36

GC content: 54.94

Gene sequence:

>597_bases
ATGATGAGTGATTCTACAAATAATAACAAGGTGAACGGGCACATTATGAGCCTGCAGCAGCTGATTTCAGCGCCGCTGGT
CGCAACGATTGACGCGGATGCGATGTCCACGGAACGCTACATGAAGCATTTCATGTCCCTGGCCTTTGAGTCCTACAATC
CTGTGGACGGTTCCACCGGGGCGTTGAGGTTGATCAGCTTCAATTTTACGGACAGCGACGCTTCCGGCGGCGCGGAAAAG
AAGGTCAGCGTGCCGCTCGTCAGCCTGGTGACGCTGCCGCTGCTGCAAATCAAACAGGCGGATTTTGATTTTGACATCAA
TATCATTGACGCCGTAGCCGCCGCGCCGAATGAACATTTTTCCCTGAACAGGGGAGAGGTGGAGTCCCCCGGCGGAAAAG
AGCGGGATGAAGGGCTGAATTTTCGGGCTTCCCTGGCTCCGCAGTCCGGGAGAGGGGCTTCTTCCTCCCTGCAGGCGAAC
ATGAAAATCCATGTCTCCATGCAGCAGGCTGACATGCCTTCCGGCCTGTCCCAATTTCTCCAGCTGGCTTCCAGGCCGCA
TTATGAGGATGTCCCTTCCCGGGAAAAGAATGATTAA

Upstream 100 bases:

>100_bases
AGCCGTGCAGACCCTGCGCCTGAATATATCCCCTGCTTCCATTCCCTCCGTTCTGGCGGAGCAGAATGATGTTTCCGGGT
TGTCCGCGCAATAGTGATAG

Downstream 100 bases:

>100_bases
TTGAAAAAAACGATATGGACCAGAAAACAACTTATTCCTACCAGCGCACTCCGGGCCTTGACTGCCCCAAATGCGGGGTG
TATTTCCCCACGACCATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTGALRLISFNFTDSDASGGAEK
KVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHFSLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQAN
MKIHVSMQQADMPSGLSQFLQLASRPHYEDVPSREKND

Sequences:

>Translated_198_residues
MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTGALRLISFNFTDSDASGGAEK
KVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHFSLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQAN
MKIHVSMQQADMPSGLSQFLQLASRPHYEDVPSREKND
>Mature_198_residues
MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTGALRLISFNFTDSDASGGAEK
KVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHFSLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQAN
MKIHVSMQQADMPSGLSQFLQLASRPHYEDVPSREKND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21462; Mature: 21462

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTG
CCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ALRLISFNFTDSDASGGAEKKVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHF
EEEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCE
SLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQANMKIHVSMQQADMPSGLSQFL
ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEEEEEECCCCCCHHHHHHH
QLASRPHYEDVPSREKND
HHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTG
CCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ALRLISFNFTDSDASGGAEKKVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHF
EEEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCE
SLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQANMKIHVSMQQADMPSGLSQFL
ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEEEEEECCCCCCHHHHHHH
QLASRPHYEDVPSREKND
HHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA