Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735508
Identifier: 187735508
GI number: 187735508
Start: 1208355
End: 1208951
Strand: Direct
Name: 187735508
Synonym: Amuc_1013
Alternate gene names: NA
Gene position: 1208355-1208951 (Clockwise)
Preceding gene: 187735507
Following gene: 187735509
Centisome position: 45.36
GC content: 54.94
Gene sequence:
>597_bases ATGATGAGTGATTCTACAAATAATAACAAGGTGAACGGGCACATTATGAGCCTGCAGCAGCTGATTTCAGCGCCGCTGGT CGCAACGATTGACGCGGATGCGATGTCCACGGAACGCTACATGAAGCATTTCATGTCCCTGGCCTTTGAGTCCTACAATC CTGTGGACGGTTCCACCGGGGCGTTGAGGTTGATCAGCTTCAATTTTACGGACAGCGACGCTTCCGGCGGCGCGGAAAAG AAGGTCAGCGTGCCGCTCGTCAGCCTGGTGACGCTGCCGCTGCTGCAAATCAAACAGGCGGATTTTGATTTTGACATCAA TATCATTGACGCCGTAGCCGCCGCGCCGAATGAACATTTTTCCCTGAACAGGGGAGAGGTGGAGTCCCCCGGCGGAAAAG AGCGGGATGAAGGGCTGAATTTTCGGGCTTCCCTGGCTCCGCAGTCCGGGAGAGGGGCTTCTTCCTCCCTGCAGGCGAAC ATGAAAATCCATGTCTCCATGCAGCAGGCTGACATGCCTTCCGGCCTGTCCCAATTTCTCCAGCTGGCTTCCAGGCCGCA TTATGAGGATGTCCCTTCCCGGGAAAAGAATGATTAA
Upstream 100 bases:
>100_bases AGCCGTGCAGACCCTGCGCCTGAATATATCCCCTGCTTCCATTCCCTCCGTTCTGGCGGAGCAGAATGATGTTTCCGGGT TGTCCGCGCAATAGTGATAG
Downstream 100 bases:
>100_bases TTGAAAAAAACGATATGGACCAGAAAACAACTTATTCCTACCAGCGCACTCCGGGCCTTGACTGCCCCAAATGCGGGGTG TATTTCCCCACGACCATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTGALRLISFNFTDSDASGGAEK KVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHFSLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQAN MKIHVSMQQADMPSGLSQFLQLASRPHYEDVPSREKND
Sequences:
>Translated_198_residues MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTGALRLISFNFTDSDASGGAEK KVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHFSLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQAN MKIHVSMQQADMPSGLSQFLQLASRPHYEDVPSREKND >Mature_198_residues MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTGALRLISFNFTDSDASGGAEK KVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHFSLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQAN MKIHVSMQQADMPSGLSQFLQLASRPHYEDVPSREKND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21462; Mature: 21462
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTG CCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC ALRLISFNFTDSDASGGAEKKVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHF EEEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCE SLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQANMKIHVSMQQADMPSGLSQFL ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEEEEEECCCCCCHHHHHHH QLASRPHYEDVPSREKND HHHCCCCCCCCCCCCCCC >Mature Secondary Structure MMSDSTNNNKVNGHIMSLQQLISAPLVATIDADAMSTERYMKHFMSLAFESYNPVDGSTG CCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC ALRLISFNFTDSDASGGAEKKVSVPLVSLVTLPLLQIKQADFDFDINIIDAVAAAPNEHF EEEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCE SLNRGEVESPGGKERDEGLNFRASLAPQSGRGASSSLQANMKIHVSMQQADMPSGLSQFL ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECEEEEEEECCCCCCHHHHHHH QLASRPHYEDVPSREKND HHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA