Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735510
Identifier: 187735510
GI number: 187735510
Start: 1209193
End: 1209546
Strand: Direct
Name: 187735510
Synonym: Amuc_1015
Alternate gene names: NA
Gene position: 1209193-1209546 (Clockwise)
Preceding gene: 187735509
Following gene: 187735521
Centisome position: 45.39
GC content: 59.04
Gene sequence:
>354_bases ATGAAGAAACCGTTGATTATCCTGTCCGCCGTGCTGTGCATGGTTCTGCCGTCCTTGTCTCCGGCGGAGATGCGGCAGCG GGAACCCCGCCAGCTTGCCGCCGCCTGGCAGGAAGTAAAGAAGCAGATAGCAGACGACGGGAAAACCATCCGTGTGAGGG ACGGCATTCAAGCGCTTGAACTCCTGGCGGAACTGGGGATCTCTTCCGTTCCGGCGGACGGCGTCAGGCTGTCCCGCGGC AGTCTGACCATTGTGGTCACGCGTGGGAAGAAAGAGGACGGGATTTTTTACGTGCTGGCTGTTAAGGAAGAAGGGGGCGC AAGCCTGGAAGTGAAGATGGTTCCTCCTTCCTGA
Upstream 100 bases:
>100_bases TGACGCTTTACATTGACCGGAAAGAATCAGGCCATGCCATGCAGGCCCTGGAAAATTTCCAGAACGCATTAGACAAGCAG CTTCCCTCCGCCTCCCTGTC
Downstream 100 bases:
>100_bases TTTGCCGGAGAGGAAGGTCATTCATTTTCAAAATCCCACACGCGGCGGCGGGCGTTTTTCTTCGTCCGCCCGCCGTTGGC TTTCCGGAAGGGGTCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKKPLIILSAVLCMVLPSLSPAEMRQREPRQLAAAWQEVKKQIADDGKTIRVRDGIQALELLAELGISSVPADGVRLSRG SLTIVVTRGKKEDGIFYVLAVKEEGGASLEVKMVPPS
Sequences:
>Translated_117_residues MKKPLIILSAVLCMVLPSLSPAEMRQREPRQLAAAWQEVKKQIADDGKTIRVRDGIQALELLAELGISSVPADGVRLSRG SLTIVVTRGKKEDGIFYVLAVKEEGGASLEVKMVPPS >Mature_117_residues MKKPLIILSAVLCMVLPSLSPAEMRQREPRQLAAAWQEVKKQIADDGKTIRVRDGIQALELLAELGISSVPADGVRLSRG SLTIVVTRGKKEDGIFYVLAVKEEGGASLEVKMVPPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12665; Mature: 12665
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPLIILSAVLCMVLPSLSPAEMRQREPRQLAAAWQEVKKQIADDGKTIRVRDGIQALE CCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH LLAELGISSVPADGVRLSRGSLTIVVTRGKKEDGIFYVLAVKEEGGASLEVKMVPPS HHHHCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCC >Mature Secondary Structure MKKPLIILSAVLCMVLPSLSPAEMRQREPRQLAAAWQEVKKQIADDGKTIRVRDGIQALE CCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH LLAELGISSVPADGVRLSRGSLTIVVTRGKKEDGIFYVLAVKEEGGASLEVKMVPPS HHHHCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA