Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735505
Identifier: 187735505
GI number: 187735505
Start: 1206019
End: 1206504
Strand: Direct
Name: 187735505
Synonym: Amuc_1010
Alternate gene names: NA
Gene position: 1206019-1206504 (Clockwise)
Preceding gene: 187735504
Following gene: 187735506
Centisome position: 45.27
GC content: 50.0
Gene sequence:
>486_bases ATGACCGTTCAATTTATTAAAGTCACTAAAAAAGATAGGGTCTGCTATGCTCCGGTGCCGGAGCCGTTGGAAGAGGGGGA TAAGCTGGAAATCATGGAAATGAAGGATGAAGCCCTTTTCCCGCCGGCAGGGAAAAACGCAAGGATTTCCCTATCCAGGA ATCCCATGGTATTCGTGAAAATGAATGACGGATTCCAGCGCATCCTGATGAAGAATATCCTGTATGTGGAGGCGGGCGGA AGTTATTGCACGCTGCACGTGCACGGCATGCCGGCTATCCTGGTATCCGCTCCGCTGGCGCGGGTATCCGAGCATCTGGA TGGGGAATATTTTATCCGCGTGCACCGTTCCTACCTGGTTAACAAGCTGCATATAGAATCCATTGCGGGCAACTTCCTCC AGGTGGGCGTCGTTGCCATTCCCATCAGCAAATTCATGAAGAAAAAAGTGCTGGGCAGTTTGAACATGCTGTCGTTTTCC AAATAA
Upstream 100 bases:
>100_bases CTCTTCCCATCCGAAAGAGTGGATTTTGGTTTCAGAAGGTCATTTTTGTTATTCATTGAGAGATTTATTGATGATTTAAA GTTTTTGTTATGATTTTTGA
Downstream 100 bases:
>100_bases GTTCCGGCCTGCCGCACGGGCTCCTGCGGCGTTCCGGGAAAGCGAAATGGAACGGCCGGAAAGGCGGGATGGAAGCAGAA ACGGAATGGCCGCATCATTC
Product: response regulator receiver protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTVQFIKVTKKDRVCYAPVPEPLEEGDKLEIMEMKDEALFPPAGKNARISLSRNPMVFVKMNDGFQRILMKNILYVEAGG SYCTLHVHGMPAILVSAPLARVSEHLDGEYFIRVHRSYLVNKLHIESIAGNFLQVGVVAIPISKFMKKKVLGSLNMLSFS K
Sequences:
>Translated_161_residues MTVQFIKVTKKDRVCYAPVPEPLEEGDKLEIMEMKDEALFPPAGKNARISLSRNPMVFVKMNDGFQRILMKNILYVEAGG SYCTLHVHGMPAILVSAPLARVSEHLDGEYFIRVHRSYLVNKLHIESIAGNFLQVGVVAIPISKFMKKKVLGSLNMLSFS K >Mature_160_residues TVQFIKVTKKDRVCYAPVPEPLEEGDKLEIMEMKDEALFPPAGKNARISLSRNPMVFVKMNDGFQRILMKNILYVEAGGS YCTLHVHGMPAILVSAPLARVSEHLDGEYFIRVHRSYLVNKLHIESIAGNFLQVGVVAIPISKFMKKKVLGSLNMLSFSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18080; Mature: 17949
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS50930 HTH_LYTTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQFIKVTKKDRVCYAPVPEPLEEGDKLEIMEMKDEALFPPAGKNARISLSRNPMVFVK CEEEEEEEECCCCEEECCCCCHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEEE MNDGFQRILMKNILYVEAGGSYCTLHVHGMPAILVSAPLARVSEHLDGEYFIRVHRSYLV ECCCHHHHHHHHEEEEECCCCEEEEEECCCCEEEHHCCHHHHHHHCCCEEEEEEEHHHHH NKLHIESIAGNFLQVGVVAIPISKFMKKKVLGSLNMLSFSK HHHHHHHHHCCCEEEHEEEECHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure TVQFIKVTKKDRVCYAPVPEPLEEGDKLEIMEMKDEALFPPAGKNARISLSRNPMVFVK EEEEEEEECCCCEEECCCCCHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEEE MNDGFQRILMKNILYVEAGGSYCTLHVHGMPAILVSAPLARVSEHLDGEYFIRVHRSYLV ECCCHHHHHHHHEEEEECCCCEEEEEECCCCEEEHHCCHHHHHHHCCCEEEEEEEHHHHH NKLHIESIAGNFLQVGVVAIPISKFMKKKVLGSLNMLSFSK HHHHHHHHHCCCEEEHEEEECHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA