Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735495

Identifier: 187735495

GI number: 187735495

Start: 1190851

End: 1190979

Strand: Reverse

Name: 187735495

Synonym: Amuc_0998

Alternate gene names: NA

Gene position: 1190979-1190851 (Counterclockwise)

Preceding gene: 187735496

Following gene: 187735493

Centisome position: 44.7

GC content: 62.02

Gene sequence:

>129_bases
ATGAAGAACATCGCTATCCTCGCCATCGCCGGCGCCGCTTGCCTGGTCGCTTCTTGCTCCCAGCAGCAGCAGCAACAGCA
AACCACCGCTCCTGCTCCCGCTCCGGTTGTGCAGGCCAAGGGCAAGTAA

Upstream 100 bases:

>100_bases
ATCTCTTGATTTCTACTTGCCACCATTTACATTGGTGCCAGCAAACCTCCGTGGATGCGGAGGTTCCAGTAGTTAACAAA
CACTGTATTTAATTCGAATT

Downstream 100 bases:

>100_bases
GTTTGCAGCGGGGTTTTGCCCTGCAACACTAGCAAATTATCCAATTAATCCGCACTCGGTGTACGCACTGAGTGCGTTTT
TATTTGCCCTGAGTCCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK

Sequences:

>Translated_42_residues
MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK
>Mature_42_residues
MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4235; Mature: 4235

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNIAILAIAGAACLVASCSQQQQQQQTTAPAPAPVVQAKGK
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA