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The map label for this gene is yccM [C]

Identifier: 187735463

GI number: 187735463

Start: 1146758

End: 1148524

Strand: Direct

Name: yccM [C]

Synonym: Amuc_0962

Alternate gene names: 187735463

Gene position: 1146758-1148524 (Clockwise)

Preceding gene: 187735462

Following gene: 187735464

Centisome position: 43.04

GC content: 60.05

Gene sequence:

>1767_bases
ATGATAAATATGTCAGTTATCAAAGCCTTTCTCGTCAGTCCTCTGAAGTGGCTCCGCGTGACGGTGGCCGTCATTTTCTT
TATTGGGATTGCATACGCTTTTCTGCACCACATTCCCGCGTGGAACGTGCCGAACATGACGGGGGGCGGAGAGGGGATGG
AAGATTCCTTTTCCCTGGCGCGGTGGCAATTTGTGCCGTCCGTGCTGGGGACCCTGAGCGGGGCAGCCGTTTCCGCCGTG
ATTCTGGGGGTTTTGCTGCTGCTTACGCTGCTGTTCGGCCGCGTATACTGTTCCTTCATCTGCCCGCTGGGGATTCTCCA
GGATATTGTCTTCAGAATCCGCCGCTGGCTGGCGCCGAAGCGTTTCCTGAAATTCTCCCGGCCTGTGCCGTGGGTGCGGT
ATGGGGTGCTGGCATTGCTGGCCGCCTGCTGCGTGACGGGGCTGGCCGGTCTGTCTCTGAATTGGCTGGACCCTTACAGC
ATTTTCGGGCGCATCATGTATGTGCTGGCATGGCCGGCCGCCATTTGGAGCAATAACCTGCTGGCGGCGGACAGTTCTTC
TGCGGACCTGGTCCAGATGGATTATTTCCCCGCGGCTTTCCCGGTTCTGCTGGCTTCCGCCGGCATGCTCGGCCTGGTGG
CCGTCATGAGTGCCTGGAAGGGGCGCCTGTATTGCAATACGGTATGCCCCGTCGGCACGCTGCTTGGCCTGCTTTCCCGT
ATCTCCCTTTTCCGGCTGGGCTTTGATCCCGCCTCCTGCAAGAAATGCGGCAAATGCGTCAAATCCTGCAAGGCGCAATG
CCTGAACCTGAAGGAATACAAAATAGACTCCTCACGCTGCGTGGCGTGCTACGATTGCGTGCGCTCCTGCAGTGAGGGGG
GAATACGCTACCGCTGGTTTACCAGGGCCCGTCAACTGGTTCCGGCCCAAAAAAAGAAGGCTTCCCCGGATACCGCCCTC
TCTTCTTCCGCCGCAGTTCCCTCCATTGCCGGGAGTTCCCGCCGCCAGTTCCTGGAGGCTACTGCGGCCGGGCTGGCTAC
GGCCGCCCTTTCCGGATGCCGGGGAGATGCCGCCCGGAAGCTGGACCCCACCCAGTGCGTTCTTCCTCCCGGAGCCGGTT
CCCTGGAACGTTTTCTGGATATCTGCACCGGCTGCCAGATGTGCGTTGCCAACTGCCCCACCCATGTGCTTCAGCCTTCA
TACCTGCAGCTTGGCCTGAAGGGATTCATGAAACCCCGGATGGATTTTGCCACCAAATACTGCCTTTATGATTGCCACCG
GTGTGCGGAAGTCTGCCCCACGGGGGCCATACGCAGGATGCCTGTTACCGCGGAAAGGGATACTGAGGGAATAACAAAAG
ATACTACGCGCATTGCCGTGGCCCGGTTTTACGTCTGCCGCTGCCTGGTTGCCCGGGAGGACATGGATTGCGGAGCCTGT
ACGGAGCATTGCCCCACCAAGGCCCTTTACACGGTGCCCTATATCGGGCGTGACGGCCAGGAGCACCGCCTGCCCAGGCT
GGATCCTTCCCTGTGCATCGGCTGCGGCGCGTGCGAACACGCCTGTCCCGTTACCGCGGAACGGCCTGAGGAACGCGAAC
GCCGGAACTCCTGCGATTTGTGCGAGGAAAAATGCGAGTTCGGAAGGCGGCGGGAAATGCCCCCCCGGGCGTTGGTGGTC
CGTGCCGTAAATCCCCAGCAGAAAGCTGTTAAAAAGTTTGAGGACAAAGCTGTGGATCCGGTGGGGGATGCGGATTTTCC
GTTTTGA

Upstream 100 bases:

>100_bases
GGCTTAATATCCGCCGTATCAGCATGGCCTGACGCGGCGGCTCCTTCTCCCGTCTGCGGATGACGCGGTGGGGGGCCAAC
TTTCCGCCTCCGGCGGGTTT

Downstream 100 bases:

>100_bases
AAACGGCTGGCGGTTTGGAAGATGATGAAATAAACGCTCCCGGAGGCTTCAAACCTCCCTTTCGGGAGGGCTGTGTCTGT
CCATCCGGTTTTTCGGGGGA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MINMSVIKAFLVSPLKWLRVTVAVIFFIGIAYAFLHHIPAWNVPNMTGGGEGMEDSFSLARWQFVPSVLGTLSGAAVSAV
ILGVLLLLTLLFGRVYCSFICPLGILQDIVFRIRRWLAPKRFLKFSRPVPWVRYGVLALLAACCVTGLAGLSLNWLDPYS
IFGRIMYVLAWPAAIWSNNLLAADSSSADLVQMDYFPAAFPVLLASAGMLGLVAVMSAWKGRLYCNTVCPVGTLLGLLSR
ISLFRLGFDPASCKKCGKCVKSCKAQCLNLKEYKIDSSRCVACYDCVRSCSEGGIRYRWFTRARQLVPAQKKKASPDTAL
SSSAAVPSIAGSSRRQFLEATAAGLATAALSGCRGDAARKLDPTQCVLPPGAGSLERFLDICTGCQMCVANCPTHVLQPS
YLQLGLKGFMKPRMDFATKYCLYDCHRCAEVCPTGAIRRMPVTAERDTEGITKDTTRIAVARFYVCRCLVAREDMDCGAC
TEHCPTKALYTVPYIGRDGQEHRLPRLDPSLCIGCGACEHACPVTAERPEERERRNSCDLCEEKCEFGRRREMPPRALVV
RAVNPQQKAVKKFEDKAVDPVGDADFPF

Sequences:

>Translated_588_residues
MINMSVIKAFLVSPLKWLRVTVAVIFFIGIAYAFLHHIPAWNVPNMTGGGEGMEDSFSLARWQFVPSVLGTLSGAAVSAV
ILGVLLLLTLLFGRVYCSFICPLGILQDIVFRIRRWLAPKRFLKFSRPVPWVRYGVLALLAACCVTGLAGLSLNWLDPYS
IFGRIMYVLAWPAAIWSNNLLAADSSSADLVQMDYFPAAFPVLLASAGMLGLVAVMSAWKGRLYCNTVCPVGTLLGLLSR
ISLFRLGFDPASCKKCGKCVKSCKAQCLNLKEYKIDSSRCVACYDCVRSCSEGGIRYRWFTRARQLVPAQKKKASPDTAL
SSSAAVPSIAGSSRRQFLEATAAGLATAALSGCRGDAARKLDPTQCVLPPGAGSLERFLDICTGCQMCVANCPTHVLQPS
YLQLGLKGFMKPRMDFATKYCLYDCHRCAEVCPTGAIRRMPVTAERDTEGITKDTTRIAVARFYVCRCLVAREDMDCGAC
TEHCPTKALYTVPYIGRDGQEHRLPRLDPSLCIGCGACEHACPVTAERPEERERRNSCDLCEEKCEFGRRREMPPRALVV
RAVNPQQKAVKKFEDKAVDPVGDADFPF
>Mature_588_residues
MINMSVIKAFLVSPLKWLRVTVAVIFFIGIAYAFLHHIPAWNVPNMTGGGEGMEDSFSLARWQFVPSVLGTLSGAAVSAV
ILGVLLLLTLLFGRVYCSFICPLGILQDIVFRIRRWLAPKRFLKFSRPVPWVRYGVLALLAACCVTGLAGLSLNWLDPYS
IFGRIMYVLAWPAAIWSNNLLAADSSSADLVQMDYFPAAFPVLLASAGMLGLVAVMSAWKGRLYCNTVCPVGTLLGLLSR
ISLFRLGFDPASCKKCGKCVKSCKAQCLNLKEYKIDSSRCVACYDCVRSCSEGGIRYRWFTRARQLVPAQKKKASPDTAL
SSSAAVPSIAGSSRRQFLEATAAGLATAALSGCRGDAARKLDPTQCVLPPGAGSLERFLDICTGCQMCVANCPTHVLQPS
YLQLGLKGFMKPRMDFATKYCLYDCHRCAEVCPTGAIRRMPVTAERDTEGITKDTTRIAVARFYVCRCLVAREDMDCGAC
TEHCPTKALYTVPYIGRDGQEHRLPRLDPSLCIGCGACEHACPVTAERPEERERRNSCDLCEEKCEFGRRREMPPRALVV
RAVNPQQKAVKKFEDKAVDPVGDADFPF

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787226, Length=257, Percent_Identity=25.2918287937743, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64542; Mature: 64542

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCHHEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCCHHEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA