Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735437
Identifier: 187735437
GI number: 187735437
Start: 1113506
End: 1114573
Strand: Direct
Name: 187735437
Synonym: Amuc_0936
Alternate gene names: NA
Gene position: 1113506-1114573 (Clockwise)
Preceding gene: 187735436
Following gene: 187735438
Centisome position: 41.8
GC content: 60.67
Gene sequence:
>1068_bases ATGACGCCGCCGGAAGCCTCCGTTCCCGTGATTCTGGAGAAGACCGCCGCCCGCCGGATGGTGTGGGTGGATGTGGCCCG CGTGGCCGCCTGCATCCTGATTATTGCGAATCACATGGCTTTCTATTCGGCGGAGCTGTACCGGTGGATATGGGCGGAGT TCCTGGCGGCGCGCACGCCCTTTTTTCTGCTGGCGGCGGGCTATTTTGTGGGAAGAGGGTCTTTTGGCCCTCTGGATGGC GGGAGCCTTTTCCTCTGGCGGCGGAGCTGGTTTCTTCTTCGTCCGTACCTGGTGTGGGGACTGGCTGCGGCCGTTCTGAT CGGCTGGTCCCCCCTGCACGAATATTACGCGTCCTACCGGCCTATGTATGAATGGCTGGGAGGGGAAAAGGGAGCCGGGT TCTGGCCTGCTCTCGCGGCGTTCGGCCGCTGCCTGGGCATTGCCGGGCATCCGGTGGACGCTCCCATGTGGTTTCTGCGC GATATCATCATCTATACCGCTGCGGCCCCCCTTCTTTACCGTTTGGGGGACTATCTGCTCTGGGCGGGCATGGTCATGCT GTCCCTGAACTATTTTGCGCTGGATCTGGCGGATCATGATTATCCCATCGCCAACAGCCTGGGATTTTTCCTGCTGGGAA TGTATGTTTCCCGGTATTCCCTCTCGTTCCTGACGGAATCCGTGCGCCGGTACGCGGTGCCCTTCCTGGTCGCCACGCTT GCGCTTACCTGGTGGCTGGCAGGCCACCGGGACCAGCACAACTCCATGCTCATCGCCCTGGGCATGCTGGGGCTGATGTC CCTGGCCATTCTGTTCACGGAATGGTTCCCGCGCGCGGCCAGGTGGGTGGCGGGGCTGGCTCCGGCATGTTTTTTCATTT TCGGAACGCATTACATCGTCATCATCCTGCTGCGTGAAAGCGGCTGGATTACATGGAAGGGGGCGGCCTGGGACATGCTT TGGCTCTTTCTGGTTCCGGTCATTTTCGCCGTGTTGGCGGGGCTTTTTTTCTGCATGAAAAGATTTGCCCCGCGGCTGGT TCCCCTGCTGGGGGCCTATGGGAAATAG
Upstream 100 bases:
>100_bases CGTAACGGACGGCGCGCCCCTGATTGTGACGGACCGCCCCCGCATCGCGTTGCCGGAGCAGCTCGGCATTGCTCCTTTGT AACTTCAGCCTCTCCAGGGA
Downstream 100 bases:
>100_bases CCGTCTTGAAGAGCCGTTCCGCCGGGACGGGAAGGGAGCCGCGCTTATCTCTTGCCGTCAAAAGGCAAATTCTTTATTCT TTCCTTTGCTGGAAGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTPPEASVPVILEKTAARRMVWVDVARVAACILIIANHMAFYSAELYRWIWAEFLAARTPFFLLAAGYFVGRGSFGPLDG GSLFLWRRSWFLLRPYLVWGLAAAVLIGWSPLHEYYASYRPMYEWLGGEKGAGFWPALAAFGRCLGIAGHPVDAPMWFLR DIIIYTAAAPLLYRLGDYLLWAGMVMLSLNYFALDLADHDYPIANSLGFFLLGMYVSRYSLSFLTESVRRYAVPFLVATL ALTWWLAGHRDQHNSMLIALGMLGLMSLAILFTEWFPRAARWVAGLAPACFFIFGTHYIVIILLRESGWITWKGAAWDML WLFLVPVIFAVLAGLFFCMKRFAPRLVPLLGAYGK
Sequences:
>Translated_355_residues MTPPEASVPVILEKTAARRMVWVDVARVAACILIIANHMAFYSAELYRWIWAEFLAARTPFFLLAAGYFVGRGSFGPLDG GSLFLWRRSWFLLRPYLVWGLAAAVLIGWSPLHEYYASYRPMYEWLGGEKGAGFWPALAAFGRCLGIAGHPVDAPMWFLR DIIIYTAAAPLLYRLGDYLLWAGMVMLSLNYFALDLADHDYPIANSLGFFLLGMYVSRYSLSFLTESVRRYAVPFLVATL ALTWWLAGHRDQHNSMLIALGMLGLMSLAILFTEWFPRAARWVAGLAPACFFIFGTHYIVIILLRESGWITWKGAAWDML WLFLVPVIFAVLAGLFFCMKRFAPRLVPLLGAYGK >Mature_354_residues TPPEASVPVILEKTAARRMVWVDVARVAACILIIANHMAFYSAELYRWIWAEFLAARTPFFLLAAGYFVGRGSFGPLDGG SLFLWRRSWFLLRPYLVWGLAAAVLIGWSPLHEYYASYRPMYEWLGGEKGAGFWPALAAFGRCLGIAGHPVDAPMWFLRD IIIYTAAAPLLYRLGDYLLWAGMVMLSLNYFALDLADHDYPIANSLGFFLLGMYVSRYSLSFLTESVRRYAVPFLVATLA LTWWLAGHRDQHNSMLIALGMLGLMSLAILFTEWFPRAARWVAGLAPACFFIFGTHYIVIILLRESGWITWKGAAWDMLW LFLVPVIFAVLAGLFFCMKRFAPRLVPLLGAYGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40160; Mature: 40029
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPEASVPVILEKTAARRMVWVDVARVAACILIIANHMAFYSAELYRWIWAEFLAARTP CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FFLLAAGYFVGRGSFGPLDGGSLFLWRRSWFLLRPYLVWGLAAAVLIGWSPLHEYYASYR HHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC PMYEWLGGEKGAGFWPALAAFGRCLGIAGHPVDAPMWFLRDIIIYTAAAPLLYRLGDYLL HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WAGMVMLSLNYFALDLADHDYPIANSLGFFLLGMYVSRYSLSFLTESVRRYAVPFLVATL HHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALTWWLAGHRDQHNSMLIALGMLGLMSLAILFTEWFPRAARWVAGLAPACFFIFGTHYIV HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IILLRESGWITWKGAAWDMLWLFLVPVIFAVLAGLFFCMKRFAPRLVPLLGAYGK EEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPPEASVPVILEKTAARRMVWVDVARVAACILIIANHMAFYSAELYRWIWAEFLAARTP CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FFLLAAGYFVGRGSFGPLDGGSLFLWRRSWFLLRPYLVWGLAAAVLIGWSPLHEYYASYR HHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC PMYEWLGGEKGAGFWPALAAFGRCLGIAGHPVDAPMWFLRDIIIYTAAAPLLYRLGDYLL HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WAGMVMLSLNYFALDLADHDYPIANSLGFFLLGMYVSRYSLSFLTESVRRYAVPFLVATL HHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALTWWLAGHRDQHNSMLIALGMLGLMSLAILFTEWFPRAARWVAGLAPACFFIFGTHYIV HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IILLRESGWITWKGAAWDMLWLFLVPVIFAVLAGLFFCMKRFAPRLVPLLGAYGK EEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA