Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yvqK [H]

Identifier: 187735414

GI number: 187735414

Start: 1090068

End: 1090625

Strand: Direct

Name: yvqK [H]

Synonym: Amuc_0913

Alternate gene names: 187735414

Gene position: 1090068-1090625 (Clockwise)

Preceding gene: 187735411

Following gene: 187735417

Centisome position: 40.92

GC content: 60.75

Gene sequence:

>558_bases
ATGAGCGTAATCACCAAGCGTGGAGACAGCGGAGAAACGGACCTGATGTTCGGCAGGCGTAGTCCCAAGACAGCGCCGCG
CATTGAAGCTTACGGAACGGTGGATGAATTAAATTCCCTGATTGGCGTGGTGCGCCATTCCGGGGTAAGCTCCCGGACGG
TGGAGATGCTGGACGGCGTCCAGGCTCGCCTGGTGGGTGCCATGGGGGAACTGGCCACGATGGAGGAGGATTTGCCCAAA
TATGACGCCAAGGGGTACGCCCGCATTAAGGCGGAGGATGTGGCTTGGCTGGAGGAACAGGCCCATTTGCTGGAAAAGGA
ATGCGACATCCGTTTCAAAGGCTGGGCCCGCCCGGGCAAGGAAGGATCGCTGGGATCCGCATATTTGGACCTGGCCCGTT
CCGTCTGCCGCCGTGCGGAACGCCGTGTGGTGGCATTGAGGCTGGATCATGCCCTGAGCAACGTGAACACGGCCCTGTTC
CTGAACCGCCTTTCCGATCTCTGCTGGGTGCTGGCCCGTTTTGAGGCGCTGGCCGCAGGGGAAAAGATCCAGGCCTGA

Upstream 100 bases:

>100_bases
AGAGTGCGGTACATGCCGGGAAAGATGGCGCTGTCTCCCGCTCCGGAATATGCCTTCTTTTTTGCGTGCAGGACGGCGCG
GGCATGGTAGGGTACATGGT

Downstream 100 bases:

>100_bases
GCAGGCCGTTTCCGCCCGTCCTCCTGTTCCGGCATGTTGCGTATCTGCGCGATTCCCGTGTCGGGAGAATCTCGTGAAAG
AATGGTTTTGCCGCAGATCC

Product: ATP/cobalamin adenosyltransferase

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGVQARLVGAMGELATMEEDLPK
YDAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGKEGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALF
LNRLSDLCWVLARFEALAAGEKIQA

Sequences:

>Translated_185_residues
MSVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGVQARLVGAMGELATMEEDLPK
YDAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGKEGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALF
LNRLSDLCWVLARFEALAAGEKIQA
>Mature_184_residues
SVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGVQARLVGAMGELATMEEDLPKY
DAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGKEGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALFL
NRLSDLCWVLARFEALAAGEKIQA

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=191, Percent_Identity=35.0785340314136, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115534154, Length=176, Percent_Identity=34.6590909090909, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 20450; Mature: 20318

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGV
CCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
QARLVGAMGELATMEEDLPKYDAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGK
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
EGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALFLNRLSDLCWVLARFEALAAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EKIQA
CCCCC
>Mature Secondary Structure 
SVITKRGDSGETDLMFGRRSPKTAPRIEAYGTVDELNSLIGVVRHSGVSSRTVEMLDGV
CCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
QARLVGAMGELATMEEDLPKYDAKGYARIKAEDVAWLEEQAHLLEKECDIRFKGWARPGK
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
EGSLGSAYLDLARSVCRRAERRVVALRLDHALSNVNTALFLNRLSDLCWVLARFEALAAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EKIQA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]