Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735409
Identifier: 187735409
GI number: 187735409
Start: 1083348
End: 1085591
Strand: Direct
Name: 187735409
Synonym: Amuc_0908
Alternate gene names: NA
Gene position: 1083348-1085591 (Clockwise)
Preceding gene: 187735406
Following gene: 187735411
Centisome position: 40.66
GC content: 47.59
Gene sequence:
>2244_bases ATGAGAAAAGATTCCATTTTTCTTTCCATTTTTTTATTTTTCCTTTTTCTGACAATCTCCGTAAATAAATCCCTCGCGGA AAAATATCCTTCGCTGGATGTTCCGGAAGACATTTTGCTCCACGTGAAAGAAGCTGCTTCCTCCCAGTCCCCCTATTCCG GCAATCATTCCGTAAAGCAGGCTGTGGACGGCTCTATGGAATCCGCCAACTGGCATGTTCCCGGAGTGCATCATGTGGAG GGGGAATTTGTGTTTGAAGTGCCGGAGACCATTCATTACATCATTTTTTCCGGAGCCAATTTCAATGAAATTGCCGTGTC CGCCATGTCCGGCTCGTCTTGGAAGGACCTTGGAAAATTCGATATCGGCGGCTCCAGGATGATCAGATTTAAAAAGCCTC TTCAAAAGGTTCGGAAAATCAGGTTGACGGTTGATTATCCCGAAGGTTCCTCTCCGTCTTTTACCGTACGGGAAATCAGC TTTTACAAAAGGGTGGAGTCCGCACTTAACCGGAAATTGCTGAAAGTATTTAAGGACACGAGCTGCTCCTCCATCAACCC CAGGTGTACCCTGACGGACCTCAAGGCTCTTCCGGAGTTTTTACAGATGATTGCGAAGAAAATAAAATCCGGCGATTATG AAGACAAAGAATTCCGCATTGCTTCCTATAAGGCTTACAGCCATCCGGAGTTTGCTGCGAAGGTGAGAAATATCAACGCC CTGAACAAATTTGACAATCCTACCGGAATTGTCGCGGAGAAAGGAGATGAAATTCTTGTGTTCGTAGGACCTACCCATGG AGAAGATATTGGGCTGGCCTCCGTTTCTCCAGCGGGAATAGAGTCTTCCTCCTATCCTTTGAATGAAGGGGTAAACAAAA TTAGAATCAACCGTTCGGGATTGCTTTACGTGATGTATCACACCGATATCAGCCCGCCCAAGAAGCCGATAACGGTGCAT ATTCCTGTGGGAAGCGGCATAGTGAATGGATATTTTGACGTGACGAGGCACACGGATAAGGACTGGAAGCGTATGATCAG CAACGCCCCGCATAGCATGTTCGATATCGTTGGGCGGAATTCCATGATGATTCTTCACACAAAGTACCTGAAAGATTACA GTCCGGATTCCATTACGAAATCCGTCAGGGTATGGGATGAAAGCGTCAAGGCCATGTGGAAAATCATGGGATTTGACAAG TATCCCCAGCCGCACAATAACCGGCAGCTTGGCGTTTCCGTAGAAGGAGGAGCCCATATGTTTGCAACCTGGTATTACTG CGGCTACAGTATTGGAGATCAGGGAAATACGCTGAAAAATGAAGTGCTCGCTCCTGGAGTTCTTCAGGGAAACCGCCTTT GGGGAATCGGGCATGAAATCGGTCATTGCTACCAGCATCCGTTCAACTGGCGCAGCATGTCGGAAAGTTCCAACAATTTT TTTGCCCAGCTGATTCTGGACCAGGTGACCAATGCCATTAATGGCAATGAGCAGGCCTCCGATATGGAAAACCCGTGCAA ATACCTGCTTTCAGAAGCGGTAAAGGGCATGCCGTTCCATGATTTGAACGGCTGGGCCAAATGGGGTTTTGCTCAATATT CCTTCTATCTGTATTTCCATAAGCTGGGAATCAATCCCGAATTTTATCCTAGGCTGTTTGAATCATTGCGGCGCAAGCCG CTTTCCAGGCAGGCGTATGAGGTTTCCGAAGCCCATTTGGCCTTGTATGAACGCATTTGCAATATCAGCAGGACGGACTT TACCGATGACTTTGAAATTTTTAATTGGTTTGTCCCGATTGACCGCAAGGGGCATCAATATGGGGATTACAGTTTTAAAA TGACAGAGGAAATGGCCCGGGCATCCAAGGCCCGCATTGCCGCCAAACGGTACCCCAAACCGAAATTCCGCATTGCCTTC CTGCATCAGCATGGAAAGACGGTCAATTTGTGGGGGCAGAATCTGCATGGGTCCCAGCTCAACGGCTATTGGACCAAATA CAAGCAGAACGCAAAACTCAGCCCGTCTGTAAGCGCCTCCAAAAAGGATAACATGATTATTGTGCGGAATGGGGAAAATG CAGCCGCTTTCTGTGTAGTGACCAATGGAAAGGTGGTAGGTTATTATGACCGTCAGAAGTTTGACGTTTCCGGCGTGGAA TGGAATGATACCTCTAAAGTGTACGCCATCCCGATTCAGACGGCGGAACCTTATAAGTTGATTTATGCTGCCGGGCGTTC CTGA
Upstream 100 bases:
>100_bases TTCCCGTCCCCGCATGAGGGAATTTTTGTACTATAACATGAAAAGCATGAAAAAAAACGCTGGAAATCATGTATAGTATC ATTAAATATTAATGTAGTGT
Downstream 100 bases:
>100_bases CCGTGTTTTGGAGGTTTGGGAAAAGCCTCCCGGAAAATCATATTCCGGGAGGGGCGGGTATTGGGACGCCTGCTATTCGG GTGCCTTGAAGTTATATACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MRKDSIFLSIFLFFLFLTISVNKSLAEKYPSLDVPEDILLHVKEAASSQSPYSGNHSVKQAVDGSMESANWHVPGVHHVE GEFVFEVPETIHYIIFSGANFNEIAVSAMSGSSWKDLGKFDIGGSRMIRFKKPLQKVRKIRLTVDYPEGSSPSFTVREIS FYKRVESALNRKLLKVFKDTSCSSINPRCTLTDLKALPEFLQMIAKKIKSGDYEDKEFRIASYKAYSHPEFAAKVRNINA LNKFDNPTGIVAEKGDEILVFVGPTHGEDIGLASVSPAGIESSSYPLNEGVNKIRINRSGLLYVMYHTDISPPKKPITVH IPVGSGIVNGYFDVTRHTDKDWKRMISNAPHSMFDIVGRNSMMILHTKYLKDYSPDSITKSVRVWDESVKAMWKIMGFDK YPQPHNNRQLGVSVEGGAHMFATWYYCGYSIGDQGNTLKNEVLAPGVLQGNRLWGIGHEIGHCYQHPFNWRSMSESSNNF FAQLILDQVTNAINGNEQASDMENPCKYLLSEAVKGMPFHDLNGWAKWGFAQYSFYLYFHKLGINPEFYPRLFESLRRKP LSRQAYEVSEAHLALYERICNISRTDFTDDFEIFNWFVPIDRKGHQYGDYSFKMTEEMARASKARIAAKRYPKPKFRIAF LHQHGKTVNLWGQNLHGSQLNGYWTKYKQNAKLSPSVSASKKDNMIIVRNGENAAAFCVVTNGKVVGYYDRQKFDVSGVE WNDTSKVYAIPIQTAEPYKLIYAAGRS
Sequences:
>Translated_747_residues MRKDSIFLSIFLFFLFLTISVNKSLAEKYPSLDVPEDILLHVKEAASSQSPYSGNHSVKQAVDGSMESANWHVPGVHHVE GEFVFEVPETIHYIIFSGANFNEIAVSAMSGSSWKDLGKFDIGGSRMIRFKKPLQKVRKIRLTVDYPEGSSPSFTVREIS FYKRVESALNRKLLKVFKDTSCSSINPRCTLTDLKALPEFLQMIAKKIKSGDYEDKEFRIASYKAYSHPEFAAKVRNINA LNKFDNPTGIVAEKGDEILVFVGPTHGEDIGLASVSPAGIESSSYPLNEGVNKIRINRSGLLYVMYHTDISPPKKPITVH IPVGSGIVNGYFDVTRHTDKDWKRMISNAPHSMFDIVGRNSMMILHTKYLKDYSPDSITKSVRVWDESVKAMWKIMGFDK YPQPHNNRQLGVSVEGGAHMFATWYYCGYSIGDQGNTLKNEVLAPGVLQGNRLWGIGHEIGHCYQHPFNWRSMSESSNNF FAQLILDQVTNAINGNEQASDMENPCKYLLSEAVKGMPFHDLNGWAKWGFAQYSFYLYFHKLGINPEFYPRLFESLRRKP LSRQAYEVSEAHLALYERICNISRTDFTDDFEIFNWFVPIDRKGHQYGDYSFKMTEEMARASKARIAAKRYPKPKFRIAF LHQHGKTVNLWGQNLHGSQLNGYWTKYKQNAKLSPSVSASKKDNMIIVRNGENAAAFCVVTNGKVVGYYDRQKFDVSGVE WNDTSKVYAIPIQTAEPYKLIYAAGRS >Mature_747_residues MRKDSIFLSIFLFFLFLTISVNKSLAEKYPSLDVPEDILLHVKEAASSQSPYSGNHSVKQAVDGSMESANWHVPGVHHVE GEFVFEVPETIHYIIFSGANFNEIAVSAMSGSSWKDLGKFDIGGSRMIRFKKPLQKVRKIRLTVDYPEGSSPSFTVREIS FYKRVESALNRKLLKVFKDTSCSSINPRCTLTDLKALPEFLQMIAKKIKSGDYEDKEFRIASYKAYSHPEFAAKVRNINA LNKFDNPTGIVAEKGDEILVFVGPTHGEDIGLASVSPAGIESSSYPLNEGVNKIRINRSGLLYVMYHTDISPPKKPITVH IPVGSGIVNGYFDVTRHTDKDWKRMISNAPHSMFDIVGRNSMMILHTKYLKDYSPDSITKSVRVWDESVKAMWKIMGFDK YPQPHNNRQLGVSVEGGAHMFATWYYCGYSIGDQGNTLKNEVLAPGVLQGNRLWGIGHEIGHCYQHPFNWRSMSESSNNF FAQLILDQVTNAINGNEQASDMENPCKYLLSEAVKGMPFHDLNGWAKWGFAQYSFYLYFHKLGINPEFYPRLFESLRRKP LSRQAYEVSEAHLALYERICNISRTDFTDDFEIFNWFVPIDRKGHQYGDYSFKMTEEMARASKARIAAKRYPKPKFRIAF LHQHGKTVNLWGQNLHGSQLNGYWTKYKQNAKLSPSVSASKKDNMIIVRNGENAAAFCVVTNGKVVGYYDRQKFDVSGVE WNDTSKVYAIPIQTAEPYKLIYAAGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84812; Mature: 84812
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKDSIFLSIFLFFLFLTISVNKSLAEKYPSLDVPEDILLHVKEAASSQSPYSGNHSVKQ CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH AVDGSMESANWHVPGVHHVEGEFVFEVPETIHYIIFSGANFNEIAVSAMSGSSWKDLGKF HHCCCCCCCCCCCCCEEECCCCEEEECCCEEEEEEECCCCCCCEEEEECCCCCCHHCCCC DIGGSRMIRFKKPLQKVRKIRLTVDYPEGSSPSFTVREISFYKRVESALNRKLLKVFKDT CCCCCCEEEHHHHHHHHHEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC SCSSINPRCTLTDLKALPEFLQMIAKKIKSGDYEDKEFRIASYKAYSHPEFAAKVRNINA CCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCHH LNKFDNPTGIVAEKGDEILVFVGPTHGEDIGLASVSPAGIESSSYPLNEGVNKIRINRSG HHCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEECCC LLYVMYHTDISPPKKPITVHIPVGSGIVNGYFDVTRHTDKDWKRMISNAPHSMFDIVGRN EEEEEEECCCCCCCCCEEEEEECCCCEECCEEEECCCCCHHHHHHHHCCCHHHHHHHCCC SMMILHTKYLKDYSPDSITKSVRVWDESVKAMWKIMGFDKYPQPHNNRQLGVSVEGGAHM CEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEE FATWYYCGYSIGDQGNTLKNEVLAPGVLQGNRLWGIGHEIGHCYQHPFNWRSMSESSNNF EEEEEEECEEECCCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCHH FAQLILDQVTNAINGNEQASDMENPCKYLLSEAVKGMPFHDLNGWAKWGFAQYSFYLYFH HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHEEEEEEEE KLGINPEFYPRLFESLRRKPLSRQAYEVSEAHLALYERICNISRTDFTDDFEIFNWFVPI EECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEC DRKGHQYGDYSFKMTEEMARASKARIAAKRYPKPKFRIAFLHQHGKTVNLWGQNLHGSQL CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCC NGYWTKYKQNAKLSPSVSASKKDNMIIVRNGENAAAFCVVTNGKVVGYYDRQKFDVSGVE CCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCEEEEEECCCEEECCCCC WNDTSKVYAIPIQTAEPYKLIYAAGRS CCCCCEEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure MRKDSIFLSIFLFFLFLTISVNKSLAEKYPSLDVPEDILLHVKEAASSQSPYSGNHSVKQ CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH AVDGSMESANWHVPGVHHVEGEFVFEVPETIHYIIFSGANFNEIAVSAMSGSSWKDLGKF HHCCCCCCCCCCCCCEEECCCCEEEECCCEEEEEEECCCCCCCEEEEECCCCCCHHCCCC DIGGSRMIRFKKPLQKVRKIRLTVDYPEGSSPSFTVREISFYKRVESALNRKLLKVFKDT CCCCCCEEEHHHHHHHHHEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC SCSSINPRCTLTDLKALPEFLQMIAKKIKSGDYEDKEFRIASYKAYSHPEFAAKVRNINA CCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCHH LNKFDNPTGIVAEKGDEILVFVGPTHGEDIGLASVSPAGIESSSYPLNEGVNKIRINRSG HHCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEECCC LLYVMYHTDISPPKKPITVHIPVGSGIVNGYFDVTRHTDKDWKRMISNAPHSMFDIVGRN EEEEEEECCCCCCCCCEEEEEECCCCEECCEEEECCCCCHHHHHHHHCCCHHHHHHHCCC SMMILHTKYLKDYSPDSITKSVRVWDESVKAMWKIMGFDKYPQPHNNRQLGVSVEGGAHM CEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEE FATWYYCGYSIGDQGNTLKNEVLAPGVLQGNRLWGIGHEIGHCYQHPFNWRSMSESSNNF EEEEEEECEEECCCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCHH FAQLILDQVTNAINGNEQASDMENPCKYLLSEAVKGMPFHDLNGWAKWGFAQYSFYLYFH HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHEEEEEEEE KLGINPEFYPRLFESLRRKPLSRQAYEVSEAHLALYERICNISRTDFTDDFEIFNWFVPI EECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEC DRKGHQYGDYSFKMTEEMARASKARIAAKRYPKPKFRIAFLHQHGKTVNLWGQNLHGSQL CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCC NGYWTKYKQNAKLSPSVSASKKDNMIIVRNGENAAAFCVVTNGKVVGYYDRQKFDVSGVE CCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCEEEEEECCCEEECCCCC WNDTSKVYAIPIQTAEPYKLIYAAGRS CCCCCEEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA