Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735395

Identifier: 187735395

GI number: 187735395

Start: 1066280

End: 1066723

Strand: Direct

Name: 187735395

Synonym: Amuc_0893

Alternate gene names: NA

Gene position: 1066280-1066723 (Clockwise)

Preceding gene: 187735394

Following gene: 187735398

Centisome position: 40.02

GC content: 52.93

Gene sequence:

>444_bases
ATGAATCTGCGCAAAAAACTGGCATTTGCCGTCATGGCCCTGGCCATTCCTTCATCATGGGCGGATATCCCGGAATCCTC
CGTATCCTCCGCGGCCGTCTTTGCCGTTAAAAAAGCCTGGCCCAGGGCCGGCTTCATTGAATGGGAGCTCAGCGGATCAG
GAAAACTTTATGAAGCTGAATTCAACATCAACGGTTTTGAATTTGACGTCAAAGTTGACCCTGAAGGAAAGATACTCCGG
GTCAAGGAGGAAATAGCGGTATCGGCCCTTCCGGGGCCGGTCCGCGCGGCCGCTCTGAAACCATATCCGGGCGGCAGAAT
CAAAGAAGCGGAAAAAGTGACGGAAGGAGGCGTCATCCGTTACAAGGTGGAAGTGGTGGATCATCTGGATGATTACGATG
TCCTGCTGACCCCGGAGGGCGATATTCTTTACGTGGACCATTAA

Upstream 100 bases:

>100_bases
GGGGAAGCTCCTGCTACCACCGCGTGAACGCAGGGGTGTCCAGGAGCTTCTAAAAGAAAGCTTCAGGAAACGGAATGAAA
AATAATGATATGATTATTCT

Downstream 100 bases:

>100_bases
ACGGCTTGAACCGTCTACAGCCGGAAACGGGCGCCGCCCTGTCAGGTAAAAACCCTGGCAGGGCGGCGTTCTTCCTTTTC
GGAATATCCAGTCGTCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAEFNINGFEFDVKVDPEGKILR
VKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIRYKVEVVDHLDDYDVLLTPEGDILYVDH

Sequences:

>Translated_147_residues
MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAEFNINGFEFDVKVDPEGKILR
VKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIRYKVEVVDHLDDYDVLLTPEGDILYVDH
>Mature_147_residues
MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAEFNINGFEFDVKVDPEGKILR
VKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIRYKVEVVDHLDDYDVLLTPEGDILYVDH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16132; Mature: 16132

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEE
FNINGFEFDVKVDPEGKILRVKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIR
ECCCCEEEEEEECCCCCEEEEEEHEEEECCCCCCEEEEECCCCCCCCCCCHHHCCCCEEE
YKVEVVDHLDDYDVLLTPEGDILYVDH
EEEEEEECCCCCCEEEECCCCEEEEEC
>Mature Secondary Structure
MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEE
FNINGFEFDVKVDPEGKILRVKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIR
ECCCCEEEEEEECCCCCEEEEEEHEEEECCCCCCEEEEECCCCCCCCCCCHHHCCCCEEE
YKVEVVDHLDDYDVLLTPEGDILYVDH
EEEEEEECCCCCCEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA