Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735395
Identifier: 187735395
GI number: 187735395
Start: 1066280
End: 1066723
Strand: Direct
Name: 187735395
Synonym: Amuc_0893
Alternate gene names: NA
Gene position: 1066280-1066723 (Clockwise)
Preceding gene: 187735394
Following gene: 187735398
Centisome position: 40.02
GC content: 52.93
Gene sequence:
>444_bases ATGAATCTGCGCAAAAAACTGGCATTTGCCGTCATGGCCCTGGCCATTCCTTCATCATGGGCGGATATCCCGGAATCCTC CGTATCCTCCGCGGCCGTCTTTGCCGTTAAAAAAGCCTGGCCCAGGGCCGGCTTCATTGAATGGGAGCTCAGCGGATCAG GAAAACTTTATGAAGCTGAATTCAACATCAACGGTTTTGAATTTGACGTCAAAGTTGACCCTGAAGGAAAGATACTCCGG GTCAAGGAGGAAATAGCGGTATCGGCCCTTCCGGGGCCGGTCCGCGCGGCCGCTCTGAAACCATATCCGGGCGGCAGAAT CAAAGAAGCGGAAAAAGTGACGGAAGGAGGCGTCATCCGTTACAAGGTGGAAGTGGTGGATCATCTGGATGATTACGATG TCCTGCTGACCCCGGAGGGCGATATTCTTTACGTGGACCATTAA
Upstream 100 bases:
>100_bases GGGGAAGCTCCTGCTACCACCGCGTGAACGCAGGGGTGTCCAGGAGCTTCTAAAAGAAAGCTTCAGGAAACGGAATGAAA AATAATGATATGATTATTCT
Downstream 100 bases:
>100_bases ACGGCTTGAACCGTCTACAGCCGGAAACGGGCGCCGCCCTGTCAGGTAAAAACCCTGGCAGGGCGGCGTTCTTCCTTTTC GGAATATCCAGTCGTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAEFNINGFEFDVKVDPEGKILR VKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIRYKVEVVDHLDDYDVLLTPEGDILYVDH
Sequences:
>Translated_147_residues MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAEFNINGFEFDVKVDPEGKILR VKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIRYKVEVVDHLDDYDVLLTPEGDILYVDH >Mature_147_residues MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAEFNINGFEFDVKVDPEGKILR VKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIRYKVEVVDHLDDYDVLLTPEGDILYVDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16132; Mature: 16132
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAE CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEE FNINGFEFDVKVDPEGKILRVKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIR ECCCCEEEEEEECCCCCEEEEEEHEEEECCCCCCEEEEECCCCCCCCCCCHHHCCCCEEE YKVEVVDHLDDYDVLLTPEGDILYVDH EEEEEEECCCCCCEEEECCCCEEEEEC >Mature Secondary Structure MNLRKKLAFAVMALAIPSSWADIPESSVSSAAVFAVKKAWPRAGFIEWELSGSGKLYEAE CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEE FNINGFEFDVKVDPEGKILRVKEEIAVSALPGPVRAAALKPYPGGRIKEAEKVTEGGVIR ECCCCEEEEEEECCCCCEEEEEEHEEEECCCCCCEEEEECCCCCCCCCCCHHHCCCCEEE YKVEVVDHLDDYDVLLTPEGDILYVDH EEEEEEECCCCCCEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA