Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is acoA [H]
Identifier: 187735389
GI number: 187735389
Start: 1056183
End: 1057121
Strand: Reverse
Name: acoA [H]
Synonym: Amuc_0887
Alternate gene names: 187735389
Gene position: 1057121-1056183 (Counterclockwise)
Preceding gene: 187735390
Following gene: 187735388
Centisome position: 39.68
GC content: 61.34
Gene sequence:
>939_bases ATGTTGCTGGCGCGGGCTTTTGACACCAAAATTTCCAGCCTTTACAAAGCGGGCAAAATTACGGGGGGCGTTTACCTGGG CCGCGGACATGAAGCGATTGCCGCATGCGGAGGCGTCTTTCTGACTGCCGGCTACGATGTAATCGCCCCGTTCATCCGGG AACAGGCGGCACGCGTCACCTGGGGGGAACCGATTATTGAAGCGGCACGCGCCTACCTGGGTTCCGCCCTGGGATATATG AAAGGGCGGGACGGCAATGTCCACCGGGGCCTGCCAGCGGAAGGCTATATGGCTCCCATCAGCCATCTGGGCAGCACGGT GGCTTTCGTCATCGGCTGCCTTTTCGCCAAGCGCCTGGACGGCAAACTGCCCGGCCCCGTGGGAGTAGCTTTCTGCGGCG ACGGCACCACGTCCACGGGTGCTTTTCACGAAGCCGCCAATATGGCGAACGTGGAGCGGCTGCCTCTGGTGCTCGTGGTA ACCAATAATCAATTTGCCTACTCCACCCCCAATATCAGGGAATTCGGAGAAGCCTCCCTGGCGGACAGGGGCCGCGGCTA CGGCTTCACCGTGCATGAAACGGACGGCACGGACTTCATGGCCACGCTGGAAACCTTCCGGACCGCCGTCAATAACGCGA GGGAAGGCCGGGGCCCCCAGTGGGTGCTTGCCAAGACCCTCCGCATGTGCGGGCACGGGGAACATGACGACGCCTCCTAC ATCCCCAGGGAGCTGAAAGAGGAATATGAAAAAAAAGACCCCGTGGCAGTCGCGGAACGGCAGCTGCTGGCAGCCGGCTG GCTCACGCCGGAAGAAACGGCGGCTTTGAAAAAACAGTATGCCGATGAAGTCCAGCTGGCCGTAGCCACCGCGCAGCGGG AACCGGAACCGGACCCCTTCCGGGAAGACTGGAACGCCACGGTATGGAGACCTTATTAA
Upstream 100 bases:
>100_bases GCATTGCATTTCCTTATGCAGCATATAAAATAATGGGGTGGCACATTGCGACACTACACAACCGGACTTAAAGGAAAATG CCGTCAGGGCTTTCAAGGCC
Downstream 100 bases:
>100_bases GCCAGCAAACGGAATATTCCCATGAGCGTAACATACATTGATGCCATCCACGACGCCCAGAAAGACCTGCTTACGGAAGA CAGGGACGTCTTTCTGTACG
Product: dehydrogenase E1 component
Products: [dihydrolipoyllysine-residue acetyltransferase] ; $S-acetyldihydrolipoyllysine; CO2
Alternate protein names: Acetoin:DCPIP oxidoreductase-alpha; Ao:DCPIP OR [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MLLARAFDTKISSLYKAGKITGGVYLGRGHEAIAACGGVFLTAGYDVIAPFIREQAARVTWGEPIIEAARAYLGSALGYM KGRDGNVHRGLPAEGYMAPISHLGSTVAFVIGCLFAKRLDGKLPGPVGVAFCGDGTTSTGAFHEAANMANVERLPLVLVV TNNQFAYSTPNIREFGEASLADRGRGYGFTVHETDGTDFMATLETFRTAVNNAREGRGPQWVLAKTLRMCGHGEHDDASY IPRELKEEYEKKDPVAVAERQLLAAGWLTPEETAALKKQYADEVQLAVATAQREPEPDPFREDWNATVWRPY
Sequences:
>Translated_312_residues MLLARAFDTKISSLYKAGKITGGVYLGRGHEAIAACGGVFLTAGYDVIAPFIREQAARVTWGEPIIEAARAYLGSALGYM KGRDGNVHRGLPAEGYMAPISHLGSTVAFVIGCLFAKRLDGKLPGPVGVAFCGDGTTSTGAFHEAANMANVERLPLVLVV TNNQFAYSTPNIREFGEASLADRGRGYGFTVHETDGTDFMATLETFRTAVNNAREGRGPQWVLAKTLRMCGHGEHDDASY IPRELKEEYEKKDPVAVAERQLLAAGWLTPEETAALKKQYADEVQLAVATAQREPEPDPFREDWNATVWRPY >Mature_312_residues MLLARAFDTKISSLYKAGKITGGVYLGRGHEAIAACGGVFLTAGYDVIAPFIREQAARVTWGEPIIEAARAYLGSALGYM KGRDGNVHRGLPAEGYMAPISHLGSTVAFVIGCLFAKRLDGKLPGPVGVAFCGDGTTSTGAFHEAANMANVERLPLVLVV TNNQFAYSTPNIREFGEASLADRGRGYGFTVHETDGTDFMATLETFRTAVNNAREGRGPQWVLAKTLRMCGHGEHDDASY IPRELKEEYEKKDPVAVAERQLLAAGWLTPEETAALKKQYADEVQLAVATAQREPEPDPFREDWNATVWRPY
Specific function: Catalyzes the 2,6-dichlorophenolindophenol-dependent cleavage of acetoin into acetate and acetaldehyde, in vitro. The alpha subunit is probably the catalytic subunit of the enzyme [H]
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI11386135, Length=221, Percent_Identity=28.9592760180996, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI4885543, Length=303, Percent_Identity=27.3927392739274, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI258645172, Length=221, Percent_Identity=28.9592760180996, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI4505685, Length=307, Percent_Identity=28.6644951140065, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI291084742, Length=307, Percent_Identity=28.6644951140065, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI291084744, Length=312, Percent_Identity=27.8846153846154, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI32564172, Length=314, Percent_Identity=28.343949044586, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17536047, Length=314, Percent_Identity=28.343949044586, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI86563355, Length=222, Percent_Identity=26.5765765765766, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI86563357, Length=222, Percent_Identity=26.5765765765766, Blast_Score=78, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6321026, Length=302, Percent_Identity=28.1456953642384, Blast_Score=83, Evalue=5e-17, Organism=Drosophila melanogaster, GI24639748, Length=313, Percent_Identity=28.7539936102236, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI21355903, Length=301, Percent_Identity=24.9169435215947, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24639746, Length=299, Percent_Identity=26.7558528428094, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24639740, Length=299, Percent_Identity=26.7558528428094, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24639744, Length=299, Percent_Identity=26.7558528428094, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI28571106, Length=299, Percent_Identity=26.7558528428094, Blast_Score=74, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: 1.2.4.1
Molecular weight: Translated: 33917; Mature: 33917
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLARAFDTKISSLYKAGKITGGVYLGRGHEAIAACGGVFLTAGYDVIAPFIREQAARVT CCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHCHHHHHCCHHHHHHHHHHHHHCCC WGEPIIEAARAYLGSALGYMKGRDGNVHRGLPAEGYMAPISHLGSTVAFVIGCLFAKRLD CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GKLPGPVGVAFCGDGTTSTGAFHEAANMANVERLPLVLVVTNNQFAYSTPNIREFGEASL CCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCEEEECCCCHHHHCCHHH ADRGRGYGFTVHETDGTDFMATLETFRTAVNNAREGRGPQWVLAKTLRMCGHGEHDDASY HHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHH IPRELKEEYEKKDPVAVAERQLLAAGWLTPEETAALKKQYADEVQLAVATAQREPEPDPF CHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC REDWNATVWRPY CCCCCCEEECCC >Mature Secondary Structure MLLARAFDTKISSLYKAGKITGGVYLGRGHEAIAACGGVFLTAGYDVIAPFIREQAARVT CCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHCHHHHHCCHHHHHHHHHHHHHCCC WGEPIIEAARAYLGSALGYMKGRDGNVHRGLPAEGYMAPISHLGSTVAFVIGCLFAKRLD CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GKLPGPVGVAFCGDGTTSTGAFHEAANMANVERLPLVLVVTNNQFAYSTPNIREFGEASL CCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCEEEECCCCHHHHCCHHH ADRGRGYGFTVHETDGTDFMATLETFRTAVNNAREGRGPQWVLAKTLRMCGHGEHDDASY HHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHH IPRELKEEYEKKDPVAVAERQLLAAGWLTPEETAALKKQYADEVQLAVATAQREPEPDPF CHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC REDWNATVWRPY CCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pyruvate; [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine
Specific reaction: pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S- $acetyldihydrolipoyllysine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2061286 [H]