Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735371
Identifier: 187735371
GI number: 187735371
Start: 1038694
End: 1039884
Strand: Direct
Name: 187735371
Synonym: Amuc_0869
Alternate gene names: NA
Gene position: 1038694-1039884 (Clockwise)
Preceding gene: 187735368
Following gene: 187735374
Centisome position: 38.99
GC content: 59.53
Gene sequence:
>1191_bases ATGAATGGAGCCGCTTCCCCCCGCATCAGGAAGACGATGGTATTTGTGCTGCTGGCGCTTTTTCTGGGCCAGTTCGGAAG CGGTGTGTATGATCTCGTTTTCAGCAATTTCCTTCGTGATGCCCAGCATCTTGACGTGGAGATGCGCGGGCTGATTGAAT TCCCCCGGGAATTGCCCGGCATCCTGTCTCTTTTTGTGGTCAGCCTGCTTTTCATGTTTAATGAGGTCCGCGTGGCCGGG GTGGCGTGCCTGCTGATGTTCGGCGGCATGTACGCGCTGGCTTTCTGCGGCGCCGGAACCAGCCTGTGGACCCTGTCCGC ATGGATTCTGACGGTGAGCCTGGGCCAGCATATCCTGATGGGCATGATTGATACCATTGTCATTCATACGGCAAGGCCGG AAAACTGCAGCCTGCGGCTTGGCCAGATGAAGGCTCTGGGAACGGCTGCCGCGTTGCTGGGGGCGTTGTGCGTGTGGATC AAGTGGAAATTCAACCAGTCTTTTGCCGTGGACTTTTTCGTCACGGGGGGCGTGTGCCTGCTGGCGTTCCTGTTCCTGAG CCGGGTGAAGACGCCCGTCTTTCCGCAGCGACGCGGCTGGAGGCAATGTTTCGTCTTCAAGCGCAGGTATGCCGTTTATT ATGGGTTGGAAATTCTGCACGGCATCCGCAAGCAGCTTTATCTGACCTTTGGTTTCTGGCTGATGGTCAGCACGCTGGGC CAGCCTCCCGGATATATCGGAAAAACCCTGCTCATGGCCGGTGTCATCGGACTGGTTACTCAACCCCTTATCGGCTGGAG CATCAAGCGCTACGGGGAACGGAAGGTGACGATTTTCGACAGCGTGGCGCTGTCCCTCCTGTGTCTGGCATACGCCTTCG CGCCGGAGCTGCTGCCCCTGCATTGGGCCGTGGGGGTAGTGACCGCCTGCTTTGTCCTGGACAACCTGCTGTTCGCCCTG GGTATGGCCCGGAGCACCTACGTGGCCCGCATCTGCGAGAAGCCGGAAGACATTACGCCAAGCATTTACACCGGGCTGGC CATCAATCATGTGGCTTCTATCGCTTACGGAGTGCTGGGCGGCGTGATCTGGATGAATACGGGCGGCCCGCAAGCGGTGT TCCTGATAGGCGGCGTGGCTACCGCCGGGGCCGGGCTGGTGGCGCGGCGCATGGACAGGCCACAGCCTTGA
Upstream 100 bases:
>100_bases GAAAATTCCGTTTCGAGGTTATTTTTGCAAATGCAGAGAAAACCGGCACATGAAAATAGCGGTTGTTCCGTCCGGGCGCC TGTGAGAGTATTCCCGCGCT
Downstream 100 bases:
>100_bases CAGAGTACCTAACGCACGGGTTTGCCCGCACCTTTTTTAAAGGCATCCATGATCTTGCTGAAGATGGCCGTATTTTCATA AATGCCGGTGAAAGCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Transporter MFS Superfamily; Permease Facilitator Superfamily; Permease Of Facilitator Superfamily; Facilitator Superfamily Permease; MFS Protein Permease Component; Multidrug-Efflux Transporter MFS Family; Facilitator Family Transporter
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MNGAASPRIRKTMVFVLLALFLGQFGSGVYDLVFSNFLRDAQHLDVEMRGLIEFPRELPGILSLFVVSLLFMFNEVRVAG VACLLMFGGMYALAFCGAGTSLWTLSAWILTVSLGQHILMGMIDTIVIHTARPENCSLRLGQMKALGTAAALLGALCVWI KWKFNQSFAVDFFVTGGVCLLAFLFLSRVKTPVFPQRRGWRQCFVFKRRYAVYYGLEILHGIRKQLYLTFGFWLMVSTLG QPPGYIGKTLLMAGVIGLVTQPLIGWSIKRYGERKVTIFDSVALSLLCLAYAFAPELLPLHWAVGVVTACFVLDNLLFAL GMARSTYVARICEKPEDITPSIYTGLAINHVASIAYGVLGGVIWMNTGGPQAVFLIGGVATAGAGLVARRMDRPQP
Sequences:
>Translated_396_residues MNGAASPRIRKTMVFVLLALFLGQFGSGVYDLVFSNFLRDAQHLDVEMRGLIEFPRELPGILSLFVVSLLFMFNEVRVAG VACLLMFGGMYALAFCGAGTSLWTLSAWILTVSLGQHILMGMIDTIVIHTARPENCSLRLGQMKALGTAAALLGALCVWI KWKFNQSFAVDFFVTGGVCLLAFLFLSRVKTPVFPQRRGWRQCFVFKRRYAVYYGLEILHGIRKQLYLTFGFWLMVSTLG QPPGYIGKTLLMAGVIGLVTQPLIGWSIKRYGERKVTIFDSVALSLLCLAYAFAPELLPLHWAVGVVTACFVLDNLLFAL GMARSTYVARICEKPEDITPSIYTGLAINHVASIAYGVLGGVIWMNTGGPQAVFLIGGVATAGAGLVARRMDRPQP >Mature_396_residues MNGAASPRIRKTMVFVLLALFLGQFGSGVYDLVFSNFLRDAQHLDVEMRGLIEFPRELPGILSLFVVSLLFMFNEVRVAG VACLLMFGGMYALAFCGAGTSLWTLSAWILTVSLGQHILMGMIDTIVIHTARPENCSLRLGQMKALGTAAALLGALCVWI KWKFNQSFAVDFFVTGGVCLLAFLFLSRVKTPVFPQRRGWRQCFVFKRRYAVYYGLEILHGIRKQLYLTFGFWLMVSTLG QPPGYIGKTLLMAGVIGLVTQPLIGWSIKRYGERKVTIFDSVALSLLCLAYAFAPELLPLHWAVGVVTACFVLDNLLFAL GMARSTYVARICEKPEDITPSIYTGLAINHVASIAYGVLGGVIWMNTGGPQAVFLIGGVATAGAGLVARRMDRPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43458; Mature: 43458
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAASPRIRKTMVFVLLALFLGQFGSGVYDLVFSNFLRDAQHLDVEMRGLIEFPRELPG CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILSLFVVSLLFMFNEVRVAGVACLLMFGGMYALAFCGAGTSLWTLSAWILTVSLGQHILM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GMIDTIVIHTARPENCSLRLGQMKALGTAAALLGALCVWIKWKFNQSFAVDFFVTGGVCL HHHHHHHEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHH LAFLFLSRVKTPVFPQRRGWRQCFVFKRRYAVYYGLEILHGIRKQLYLTFGFWLMVSTLG HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPPGYIGKTLLMAGVIGLVTQPLIGWSIKRYGERKVTIFDSVALSLLCLAYAFAPELLPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH HWAVGVVTACFVLDNLLFALGMARSTYVARICEKPEDITPSIYTGLAINHVASIAYGVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH GVIWMNTGGPQAVFLIGGVATAGAGLVARRMDRPQP CEEEECCCCCEEEEEECCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNGAASPRIRKTMVFVLLALFLGQFGSGVYDLVFSNFLRDAQHLDVEMRGLIEFPRELPG CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILSLFVVSLLFMFNEVRVAGVACLLMFGGMYALAFCGAGTSLWTLSAWILTVSLGQHILM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GMIDTIVIHTARPENCSLRLGQMKALGTAAALLGALCVWIKWKFNQSFAVDFFVTGGVCL HHHHHHHEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHH LAFLFLSRVKTPVFPQRRGWRQCFVFKRRYAVYYGLEILHGIRKQLYLTFGFWLMVSTLG HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPPGYIGKTLLMAGVIGLVTQPLIGWSIKRYGERKVTIFDSVALSLLCLAYAFAPELLPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH HWAVGVVTACFVLDNLLFALGMARSTYVARICEKPEDITPSIYTGLAINHVASIAYGVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH GVIWMNTGGPQAVFLIGGVATAGAGLVARRMDRPQP CEEEECCCCCEEEEEECCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA