Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735368

Identifier: 187735368

GI number: 187735368

Start: 1034862

End: 1035437

Strand: Direct

Name: 187735368

Synonym: Amuc_0866

Alternate gene names: NA

Gene position: 1034862-1035437 (Clockwise)

Preceding gene: 187735365

Following gene: 187735371

Centisome position: 38.84

GC content: 59.72

Gene sequence:

>576_bases
ATGGCGAGCCTGTACAACGGAAACGTTATGAAGAGCATTGTAACAATTAGTTCGGCATGTGCCCTGGCATTTGCAGGTAT
GGCTTCCGCCCAGGATGCCCCGGCTCCGGCACCCGCCGCTGAAACTCCTGCCGCGCCCGTTGCGCCGGCCGCTGAAGTTT
CCAAGGAAGCGAAGGAAGCCGCTGATCAGATGCTGGCGTTGATGAAGGAAATGTCCGCTACGCTCAGCACGGTGAAGGAC
AAGGCCACTGCAGACGCGGCTGCGGAAAAGATGGCAAAGATCAATGAAAAGGGGGAAGCCCTTTCCAAGAGCGCCCAGAA
GGTTCAGGCTGAAATGGATGCCGCCATGCAGGCGCGCCAGGCCGAGCTTCTGCCCATTTTCATGGGCATGATGACTGACA
TGCAGCGTTTGCAGCAGGCCGACTTTTACGGAAGCCAGGCCCTGAAGGACGCCATGAAGCAGACCGGCGCTGCCGGTCCG
GAAGAAGATGTGGAAGTGGAGGAAGATGTGGAGGTAGAAGCAGTTCCGGCCCCCGCTCCCGCCCAGAAGGAAGCGTCCGC
CCCCGCCGCCAAGTAA

Upstream 100 bases:

>100_bases
AAGATGCAACTGAAAAAATCCTTCAAGGGAGGAAAAAACGCAAATTCCTCTTTCTGCGGCATCACGGGGAGCCGTTACAC
AATGATTCATTGACGCGTGC

Downstream 100 bases:

>100_bases
CTTTCTTTTTCAGGATTGTCTCTCCTCCGACATTGCGAGATGCCGGAGGATTTTTTTATGGCAGGGCCGTCTGAAAAAGC
CTCCGGGGGGGGACGCAGGA

Product: mucin-associated surface protein (MASP)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MASLYNGNVMKSIVTISSACALAFAGMASAQDAPAPAPAAETPAAPVAPAAEVSKEAKEAADQMLALMKEMSATLSTVKD
KATADAAAEKMAKINEKGEALSKSAQKVQAEMDAAMQARQAELLPIFMGMMTDMQRLQQADFYGSQALKDAMKQTGAAGP
EEDVEVEEDVEVEAVPAPAPAQKEASAPAAK

Sequences:

>Translated_191_residues
MASLYNGNVMKSIVTISSACALAFAGMASAQDAPAPAPAAETPAAPVAPAAEVSKEAKEAADQMLALMKEMSATLSTVKD
KATADAAAEKMAKINEKGEALSKSAQKVQAEMDAAMQARQAELLPIFMGMMTDMQRLQQADFYGSQALKDAMKQTGAAGP
EEDVEVEEDVEVEAVPAPAPAQKEASAPAAK
>Mature_190_residues
ASLYNGNVMKSIVTISSACALAFAGMASAQDAPAPAPAAETPAAPVAPAAEVSKEAKEAADQMLALMKEMSATLSTVKDK
ATADAAAEKMAKINEKGEALSKSAQKVQAEMDAAMQARQAELLPIFMGMMTDMQRLQQADFYGSQALKDAMKQTGAAGPE
EDVEVEEDVEVEAVPAPAPAQKEASAPAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19720; Mature: 19588

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLYNGNVMKSIVTISSACALAFAGMASAQDAPAPAPAAETPAAPVAPAAEVSKEAKEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ADQMLALMKEMSATLSTVKDKATADAAAEKMAKINEKGEALSKSAQKVQAEMDAAMQARQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELLPIFMGMMTDMQRLQQADFYGSQALKDAMKQTGAAGPEEDVEVEEDVEVEAVPAPAP
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCC
AQKEASAPAAK
CCHHCCCCCCC
>Mature Secondary Structure 
ASLYNGNVMKSIVTISSACALAFAGMASAQDAPAPAPAAETPAAPVAPAAEVSKEAKEA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ADQMLALMKEMSATLSTVKDKATADAAAEKMAKINEKGEALSKSAQKVQAEMDAAMQARQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELLPIFMGMMTDMQRLQQADFYGSQALKDAMKQTGAAGPEEDVEVEEDVEVEAVPAPAP
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCC
AQKEASAPAAK
CCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA