Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is ngr [H]
Identifier: 187735367
GI number: 187735367
Start: 1034186
End: 1034734
Strand: Reverse
Name: ngr [H]
Synonym: Amuc_0865
Alternate gene names: 187735367
Gene position: 1034734-1034186 (Counterclockwise)
Preceding gene: 187735369
Following gene: 187735366
Centisome position: 38.84
GC content: 55.19
Gene sequence:
>549_bases ATGACTAAGACCATAGAAAACCTGAAAGCTGCCATTACGGGCGAAAGCACCGCCTCCGCCACTTACGCGGCCTATGCCGC CAAAGCCGCCCAGGAAGGGCAGCCCCTTATTCAGAAATTGTTTGAAGCCGCCTCCAAGGCGGAATCCGTCCACGCCGCCA ACCACAACAAGGTTCTGGAAAAGCTGGGGGCAACAATGGAGCCCATCGATATCCAGATCCATGTAGGAACCACCGCGGAA AACCTGAAAGCCGCCATTGCCGGGGAAACCCATGAATTTGAAAGCATGTATCCGGAATTCATCGCTGTGGCGGAAGAGGA AGGGCAGAAAGCCGCCGTCCGTTCCTTCACGTGGGCCACGGAAGCGGAAAAAGAACATGCCGATTTTTATTCCGTCGCCC TGAAGGCCCTGGAAAGCGGAGATACCAGTTCCCTGCCCAGGCAATACTGGATATGCCTGGTTTGCGGAGATACGTTCAAA TCTCTGGAAGGCGTGGATGCGTGCCCCCTCTGCGGCACCAAGGCTGAAAAATTCCTCGTCATCGGATAA
Upstream 100 bases:
>100_bases GGCTCCCCGTGATGCCGCAGAAAGAGGAATTTGCGTTTTTTCCTCCCTTGAAGGATTTTTTCAGTTGCATCTTTTTAGAA TTATTATAAATTTATTTCCG
Downstream 100 bases:
>100_bases ATTCCGTTTGAGCACCGGAGGCCGTCCACGGCACCCAGGAACCGCCCGGAACATTCCGGGCGGTTTTCTGTTTTTGCCGC AGCAGTCCATGAAAGAAAAC
Product: Rubrerythrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLEKLGATMEPIDIQIHVGTTAE NLKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWATEAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFK SLEGVDACPLCGTKAEKFLVIG
Sequences:
>Translated_182_residues MTKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLEKLGATMEPIDIQIHVGTTAE NLKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWATEAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFK SLEGVDACPLCGTKAEKFLVIG >Mature_181_residues TKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLEKLGATMEPIDIQIHVGTTAEN LKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWATEAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFKS LEGVDACPLCGTKAEKFLVIG
Specific function: Exhibits NADH peroxidase activity (in vitro) [H]
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rubredoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR004039 - InterPro: IPR003251 [H]
Pfam domain/function: PF02915 Rubrerythrin [H]
EC number: NA
Molecular weight: Translated: 19532; Mature: 19401
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLE CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHH KLGATMEPIDIQIHVGTTAENLKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWAT HHCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFKSLEGVDACPLCGTKAEKFLV HCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCHHHHHCCCCCCCCCCCCCCEEEE IG EC >Mature Secondary Structure TKTIENLKAAITGESTASATYAAYAAKAAQEGQPLIQKLFEAASKAESVHAANHNKVLE CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHH KLGATMEPIDIQIHVGTTAENLKAAIAGETHEFESMYPEFIAVAEEEGQKAAVRSFTWAT HHCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EAEKEHADFYSVALKALESGDTSSLPRQYWICLVCGDTFKSLEGVDACPLCGTKAEKFLV HCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCHHHHHCCCCCCCCCCCCCCEEEE IG EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9226272; 8383040 [H]