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The map label for this gene is ygeR [C]

Identifier: 187735323

GI number: 187735323

Start: 966666

End: 967160

Strand: Reverse

Name: ygeR [C]

Synonym: Amuc_0821

Alternate gene names: 187735323

Gene position: 967160-966666 (Counterclockwise)

Preceding gene: 187735324

Following gene: 187735322

Centisome position: 36.3

GC content: 58.18

Gene sequence:

>495_bases
ATGAACAGGGCACACATGAAAACGCCATTCATTTTAACCTGCGCCTGCGCTGCCGCGCTGGTATTCCCCCTCTCTTCCTG
CTCCACCCAGAATTCCTCCACGGCCGGTTACGACACTGCGGAACCGGCCAGCGGCGAAATCCCGCCGTGGATCGCGGAAA
GCTCTGATCCCGCTTACGAATCCGGCCATTACAGCCCGGTTCAGAGTTCTTCCAGCTACGCTTACAATCCCCCCGCCAAG
CCTTCCGTCACTAAAAAATCATCCGCGCGGAAGAGCACGGCCGGCAGCAAATCCTCCCGCAGCACGGCTGCCAGAAAGAG
CTCCTCCCGTAAATCCGCTCCCAAGGCCCGCACCTACACCGTGAAGAAAGGCGATACGCTGGGAGCCATCGCCCGCAGGA
ACGGCACCTCTGTCAAGGCCCTTAAAAGGGCTAACGGCCTTAAGTCCGATCTGATTCACATCAACCAGAAGTTGACGATT
CCGCGTTCCAAGTAA

Upstream 100 bases:

>100_bases
GACGACCCGAAATGCGGAAACCTTTTATAATCTGGGCAAGGTCTGAAAAAAAATCCCGACAATCCGCGCTACCGCCTTGA
ATCCGAAATCATAAATTAGT

Downstream 100 bases:

>100_bases
TCCGGGGAATCCTCCCGGTTCCACCACTTATGAAGCCTCTCCTTGTTCTGGCCGCCTTCCCCATGGTGCTCATGGGGTGG
GCGTCCTGTTCCCACTCCGG

Product: Peptidoglycan-binding LysM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNRAHMKTPFILTCACAAALVFPLSSCSTQNSSTAGYDTAEPASGEIPPWIAESSDPAYESGHYSPVQSSSSYAYNPPAK
PSVTKKSSARKSTAGSKSSRSTAARKSSSRKSAPKARTYTVKKGDTLGAIARRNGTSVKALKRANGLKSDLIHINQKLTI
PRSK

Sequences:

>Translated_164_residues
MNRAHMKTPFILTCACAAALVFPLSSCSTQNSSTAGYDTAEPASGEIPPWIAESSDPAYESGHYSPVQSSSSYAYNPPAK
PSVTKKSSARKSTAGSKSSRSTAARKSSSRKSAPKARTYTVKKGDTLGAIARRNGTSVKALKRANGLKSDLIHINQKLTI
PRSK
>Mature_164_residues
MNRAHMKTPFILTCACAAALVFPLSSCSTQNSSTAGYDTAEPASGEIPPWIAESSDPAYESGHYSPVQSSSSYAYNPPAK
PSVTKKSSARKSTAGSKSSRSTAARKSSSRKSAPKARTYTVKKGDTLGAIARRNGTSVKALKRANGLKSDLIHINQKLTI
PRSK

Specific function: Unknown

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Attached to the membrane by a lipid anchor (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17338; Mature: 17338

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRAHMKTPFILTCACAAALVFPLSSCSTQNSSTAGYDTAEPASGEIPPWIAESSDPAYE
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGHYSPVQSSSSYAYNPPAKPSVTKKSSARKSTAGSKSSRSTAARKSSSRKSAPKARTYT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEE
VKKGDTLGAIARRNGTSVKALKRANGLKSDLIHINQKLTIPRSK
ECCCCCHHHHHHCCCCHHHHHHHHCCCHHHHEECCCEECCCCCC
>Mature Secondary Structure
MNRAHMKTPFILTCACAAALVFPLSSCSTQNSSTAGYDTAEPASGEIPPWIAESSDPAYE
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGHYSPVQSSSSYAYNPPAKPSVTKKSSARKSTAGSKSSRSTAARKSSSRKSAPKARTYT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEE
VKKGDTLGAIARRNGTSVKALKRANGLKSDLIHINQKLTIPRSK
ECCCCCHHHHHHCCCCHHHHHHHHCCCHHHHEECCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA