Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735322

Identifier: 187735322

GI number: 187735322

Start: 965905

End: 966636

Strand: Reverse

Name: 187735322

Synonym: Amuc_0820

Alternate gene names: NA

Gene position: 966636-965905 (Counterclockwise)

Preceding gene: 187735323

Following gene: 187735321

Centisome position: 36.28

GC content: 56.28

Gene sequence:

>732_bases
ATGAAGCCTCTCCTTGTTCTGGCCGCCTTCCCCATGGTGCTCATGGGGTGGGCGTCCTGTTCCCACTCCGGCACGGGCCA
TGCGGCCCTGCCGGATCCGCGTGCCGTGGACAAATCCGTTCCGGAATATAAAAACCCGTTTCATCCTTCCACATACGCTC
ATTTTGTAGCCCGCAAGGACTACCGGAAAACGTACGACGTCTATAAGGACGATACCTTGCTGAACCGCCAGCCGAAAAAA
TCCCGAAAAATCTTCGTCTGCCTGGACGAACAACGGGGCCAGTATCTGGTGGACGGCTTGGTTGCCATGGACTTCCCCCT
CTCCTCCGGCGTAAAAGCCTATCCGACCAAAACGGGGGACTACGCCGTTATCTCCAAAAAGGAAGACCATGCTTCCAACC
TCTACGGCAAAATGTATGATGCCGAAGGCAAATGCATCAACTACAATGCCGAATCCACGGATCCCATACCGGAGGGAGGT
CGTTTTGACGGCTCTCCCATGCCTTATTGGCAGCGTCTTACCAACGCGGGGCTGGGCCTGCATGTAGGGAAAGTTCGGCG
GCATCCTGTTTCCCATGGCTGCGTCCGTTTGCCGCGAAATGTTGCGGAAATCCTCTACAGGCAAACCAGCATAGGAACGC
CCGTTACCATCCAGAAAACGCCGCTCCCCGTGCCGGAAGCGCAGAAAATCCCTCCCGCACAACAACAGGAATCCGGAGGC
CGCAAACCATAG

Upstream 100 bases:

>100_bases
AAAGGGCTAACGGCCTTAAGTCCGATCTGATTCACATCAACCAGAAGTTGACGATTCCGCGTTCCAAGTAATCCGGGGAA
TCCTCCCGGTTCCACCACTT

Downstream 100 bases:

>100_bases
CCTGCCGGGAAAACGCTCCCTTCAAAACACAAACTGTTTTAAAAAGACTGCCCGGAAAGCAGTCTTTTTTCTATCCCATT
TTTTCCAAGGCATTAACATG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG Family; ErfK/YbiS/YcfS/YnhG; Protein ErfK Family

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKDYRKTYDVYKDDTLLNRQPKK
SRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGDYAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGG
RFDGSPMPYWQRLTNAGLGLHVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG
RKP

Sequences:

>Translated_243_residues
MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKDYRKTYDVYKDDTLLNRQPKK
SRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGDYAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGG
RFDGSPMPYWQRLTNAGLGLHVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG
RKP
>Mature_243_residues
MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKDYRKTYDVYKDDTLLNRQPKK
SRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGDYAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGG
RFDGSPMPYWQRLTNAGLGLHVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG
RKP

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27010; Mature: 27010

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH
YRKTYDVYKDDTLLNRQPKKSRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGD
HHHHHHHCCCCCHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCEECCCCCCC
YAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGGRFDGSPMPYWQRLTNAGLGL
EEEEECCCHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE
HVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG
EEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCC
RKP
CCC
>Mature Secondary Structure
MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH
YRKTYDVYKDDTLLNRQPKKSRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGD
HHHHHHHCCCCCHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCEECCCCCCC
YAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGGRFDGSPMPYWQRLTNAGLGL
EEEEECCCHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE
HVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG
EEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCC
RKP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA