Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735322
Identifier: 187735322
GI number: 187735322
Start: 965905
End: 966636
Strand: Reverse
Name: 187735322
Synonym: Amuc_0820
Alternate gene names: NA
Gene position: 966636-965905 (Counterclockwise)
Preceding gene: 187735323
Following gene: 187735321
Centisome position: 36.28
GC content: 56.28
Gene sequence:
>732_bases ATGAAGCCTCTCCTTGTTCTGGCCGCCTTCCCCATGGTGCTCATGGGGTGGGCGTCCTGTTCCCACTCCGGCACGGGCCA TGCGGCCCTGCCGGATCCGCGTGCCGTGGACAAATCCGTTCCGGAATATAAAAACCCGTTTCATCCTTCCACATACGCTC ATTTTGTAGCCCGCAAGGACTACCGGAAAACGTACGACGTCTATAAGGACGATACCTTGCTGAACCGCCAGCCGAAAAAA TCCCGAAAAATCTTCGTCTGCCTGGACGAACAACGGGGCCAGTATCTGGTGGACGGCTTGGTTGCCATGGACTTCCCCCT CTCCTCCGGCGTAAAAGCCTATCCGACCAAAACGGGGGACTACGCCGTTATCTCCAAAAAGGAAGACCATGCTTCCAACC TCTACGGCAAAATGTATGATGCCGAAGGCAAATGCATCAACTACAATGCCGAATCCACGGATCCCATACCGGAGGGAGGT CGTTTTGACGGCTCTCCCATGCCTTATTGGCAGCGTCTTACCAACGCGGGGCTGGGCCTGCATGTAGGGAAAGTTCGGCG GCATCCTGTTTCCCATGGCTGCGTCCGTTTGCCGCGAAATGTTGCGGAAATCCTCTACAGGCAAACCAGCATAGGAACGC CCGTTACCATCCAGAAAACGCCGCTCCCCGTGCCGGAAGCGCAGAAAATCCCTCCCGCACAACAACAGGAATCCGGAGGC CGCAAACCATAG
Upstream 100 bases:
>100_bases AAAGGGCTAACGGCCTTAAGTCCGATCTGATTCACATCAACCAGAAGTTGACGATTCCGCGTTCCAAGTAATCCGGGGAA TCCTCCCGGTTCCACCACTT
Downstream 100 bases:
>100_bases CCTGCCGGGAAAACGCTCCCTTCAAAACACAAACTGTTTTAAAAAGACTGCCCGGAAAGCAGTCTTTTTTCTATCCCATT TTTTCCAAGGCATTAACATG
Product: ErfK/YbiS/YcfS/YnhG family protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG Family; ErfK/YbiS/YcfS/YnhG; Protein ErfK Family
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKDYRKTYDVYKDDTLLNRQPKK SRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGDYAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGG RFDGSPMPYWQRLTNAGLGLHVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG RKP
Sequences:
>Translated_243_residues MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKDYRKTYDVYKDDTLLNRQPKK SRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGDYAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGG RFDGSPMPYWQRLTNAGLGLHVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG RKP >Mature_243_residues MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKDYRKTYDVYKDDTLLNRQPKK SRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGDYAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGG RFDGSPMPYWQRLTNAGLGLHVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG RKP
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27010; Mature: 27010
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH YRKTYDVYKDDTLLNRQPKKSRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGD HHHHHHHCCCCCHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCEECCCCCCC YAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGGRFDGSPMPYWQRLTNAGLGL EEEEECCCHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE HVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG EEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCC RKP CCC >Mature Secondary Structure MKPLLVLAAFPMVLMGWASCSHSGTGHAALPDPRAVDKSVPEYKNPFHPSTYAHFVARKD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH YRKTYDVYKDDTLLNRQPKKSRKIFVCLDEQRGQYLVDGLVAMDFPLSSGVKAYPTKTGD HHHHHHHCCCCCHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCEECCCCCCC YAVISKKEDHASNLYGKMYDAEGKCINYNAESTDPIPEGGRFDGSPMPYWQRLTNAGLGL EEEEECCCHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE HVGKVRRHPVSHGCVRLPRNVAEILYRQTSIGTPVTIQKTPLPVPEAQKIPPAQQQESGG EEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCC RKP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA