Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is guaB [H]
Identifier: 187735242
GI number: 187735242
Start: 872397
End: 873848
Strand: Direct
Name: guaB [H]
Synonym: Amuc_0737
Alternate gene names: 187735242
Gene position: 872397-873848 (Clockwise)
Preceding gene: 187735236
Following gene: 187735243
Centisome position: 32.75
GC content: 61.16
Gene sequence:
>1452_bases ATGGCAGATTTCCCTCTTGGATTAAGTTTTGATGACGTGCTCCTGCTGCCCCGCCTGAGCGCGATTCTTCCCGGCGATGC AGACATCAGTTCCCAGCTTGTTCCCGGCTTTGACATGAAAATCCCCGTGTTGTCCGCGGCCATGGATACCGTTTCCGAAT CGGAACTGGCGATTGCCCTGGCGCGGGAAGGCGGCCTGGCCGTCATCCACCGCAACAACCCCATTGACATCCAGGCGGCC ATGGTTTCCCGCGTGAAGCGTTTTGAAAACGCGGTCATCCCGAACCCCGTCACGGTCAACAAGGACATGACGCTGGAAGA AGTCCACCAGATCATGATGGATCAAGGTTACTCCGGCTTCCCCGTCGTGGATGCCAACCGCAAGCTGGAAGGCATCATCA CCGGCCGCGACATGCGCGGCGTGGACGATTACCAAAATGTCCAGGTCAAGGACGTAATGACCCCCCTTTCCCGCCTAATT ACGGCAGCTCCCATCACGACCATTGAGGAAGCGCGCCACATCCTTTACACCCACCGCATTGAAAAGCTTCCTTTGGTGGA TGAACACGGCGTACTGGCCGGCCTTATCACGGAAACGGATATCCAGAAGCGCGCCATGTTTGCAGACGCTTCCAAGGATG AACACGGCCACCTGCGCTGCGGCGCCGCCGTGGGTGTCGGCCCCGATTATCTGGACCGAGCCAAAGCCCTGATTTCCGCC GGAGCGGACGCCCTGTTCATTGACGCCGCCACAGGACACACGACCCGCGTGATGGACGTGGTTTCCAACCTCCGCAAGCT GACGGACCGTCCCATCGTGGCCGGCAACGTGGTTACGGCGGAAGGGGCAGCCGATCTCATCAAGGCGGGCGTGCAGGCCA TCAAGGTGGGCGTGGGCCCCGGCTCCATTTGCACTACCCGCGTCATATCCGGCGTGGGCATGCCCCAATTCACCGCCATT CAGGAGGTAGCCTCCGTGGCGCGTCCCGCGGGCGTCACCGTCATTGCGGACGGCGGCATCCGCTATTCCGGAGACATTGT CAAAGCCCTGGCCGCAGGCGCCGACCTGGTAATGCTGGGCGGACTGCTGGCAGGTACGGAAGAAAGCCCCGGCAAGGTGG TTCATTACCAGGGCCGCCACTTCAAGCAGTATCGCGGCATGGGCTCCCTGGGCGCCATGCGCCGCGGCTCCGGCGACCGC TACGGTCAGAACAGCTCCGGCAAGCTCGTTGCGGAAGGCGTGGAAGCGCGCGTTCCGTATAAAGGCATGCTGGCGGACGT GGTATTCCAGCTCATGGGCGGCCTGCGCTCCGGCATGGGTTATCTGGGTGCGCACAATCTGGAGGAACTCCGGAACAAGG CCCGGTTCGTTCAAATCACCTCCGGCGGGCTGAAGGAAAGCCATCCCCACGATATCACCATCACGGAAGAACCCGTCAAT TATTCCTGTTAA
Upstream 100 bases:
>100_bases TATTGCATGGGGCAGAGAAAGGAACTGTGCCGCTCATTCAAAAATAAGATTCTCCTGTGTTTCGGCTTGCGTTAGAGGAT GTCCGGCTGTAGATTATCGC
Downstream 100 bases:
>100_bases CTCCTCCCTCACATGGACGACAAGCACCTCGTAGCCGTCATTGACTTCGGCTCCCAATACACCCAGCTCATCGTACGCCG CGTGCGCGAACTGGGCTACA
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MADFPLGLSFDDVLLLPRLSAILPGDADISSQLVPGFDMKIPVLSAAMDTVSESELAIALAREGGLAVIHRNNPIDIQAA MVSRVKRFENAVIPNPVTVNKDMTLEEVHQIMMDQGYSGFPVVDANRKLEGIITGRDMRGVDDYQNVQVKDVMTPLSRLI TAAPITTIEEARHILYTHRIEKLPLVDEHGVLAGLITETDIQKRAMFADASKDEHGHLRCGAAVGVGPDYLDRAKALISA GADALFIDAATGHTTRVMDVVSNLRKLTDRPIVAGNVVTAEGAADLIKAGVQAIKVGVGPGSICTTRVISGVGMPQFTAI QEVASVARPAGVTVIADGGIRYSGDIVKALAAGADLVMLGGLLAGTEESPGKVVHYQGRHFKQYRGMGSLGAMRRGSGDR YGQNSSGKLVAEGVEARVPYKGMLADVVFQLMGGLRSGMGYLGAHNLEELRNKARFVQITSGGLKESHPHDITITEEPVN YSC
Sequences:
>Translated_483_residues MADFPLGLSFDDVLLLPRLSAILPGDADISSQLVPGFDMKIPVLSAAMDTVSESELAIALAREGGLAVIHRNNPIDIQAA MVSRVKRFENAVIPNPVTVNKDMTLEEVHQIMMDQGYSGFPVVDANRKLEGIITGRDMRGVDDYQNVQVKDVMTPLSRLI TAAPITTIEEARHILYTHRIEKLPLVDEHGVLAGLITETDIQKRAMFADASKDEHGHLRCGAAVGVGPDYLDRAKALISA GADALFIDAATGHTTRVMDVVSNLRKLTDRPIVAGNVVTAEGAADLIKAGVQAIKVGVGPGSICTTRVISGVGMPQFTAI QEVASVARPAGVTVIADGGIRYSGDIVKALAAGADLVMLGGLLAGTEESPGKVVHYQGRHFKQYRGMGSLGAMRRGSGDR YGQNSSGKLVAEGVEARVPYKGMLADVVFQLMGGLRSGMGYLGAHNLEELRNKARFVQITSGGLKESHPHDITITEEPVN YSC >Mature_482_residues ADFPLGLSFDDVLLLPRLSAILPGDADISSQLVPGFDMKIPVLSAAMDTVSESELAIALAREGGLAVIHRNNPIDIQAAM VSRVKRFENAVIPNPVTVNKDMTLEEVHQIMMDQGYSGFPVVDANRKLEGIITGRDMRGVDDYQNVQVKDVMTPLSRLIT AAPITTIEEARHILYTHRIEKLPLVDEHGVLAGLITETDIQKRAMFADASKDEHGHLRCGAAVGVGPDYLDRAKALISAG ADALFIDAATGHTTRVMDVVSNLRKLTDRPIVAGNVVTAEGAADLIKAGVQAIKVGVGPGSICTTRVISGVGMPQFTAIQ EVASVARPAGVTVIADGGIRYSGDIVKALAAGADLVMLGGLLAGTEESPGKVVHYQGRHFKQYRGMGSLGAMRRGSGDRY GQNSSGKLVAEGVEARVPYKGMLADVVFQLMGGLRSGMGYLGAHNLEELRNKARFVQITSGGLKESHPHDITITEEPVNY SC
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=453, Percent_Identity=38.4105960264901, Blast_Score=294, Evalue=1e-79, Organism=Homo sapiens, GI34328928, Length=453, Percent_Identity=38.4105960264901, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI156616279, Length=453, Percent_Identity=38.4105960264901, Blast_Score=293, Evalue=3e-79, Organism=Homo sapiens, GI34328930, Length=453, Percent_Identity=38.4105960264901, Blast_Score=293, Evalue=4e-79, Organism=Homo sapiens, GI217035152, Length=448, Percent_Identity=38.3928571428571, Blast_Score=286, Evalue=3e-77, Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=36.231884057971, Blast_Score=285, Evalue=8e-77, Organism=Homo sapiens, GI217035148, Length=453, Percent_Identity=37.7483443708609, Blast_Score=283, Evalue=2e-76, Organism=Homo sapiens, GI217035150, Length=453, Percent_Identity=36.2030905077263, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI156104880, Length=288, Percent_Identity=35.7638888888889, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI50541956, Length=257, Percent_Identity=38.1322957198444, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI50541954, Length=257, Percent_Identity=37.7431906614786, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI50541952, Length=257, Percent_Identity=37.7431906614786, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI50541948, Length=257, Percent_Identity=37.7431906614786, Blast_Score=166, Evalue=3e-41, Organism=Escherichia coli, GI1788855, Length=477, Percent_Identity=51.5723270440252, Blast_Score=422, Evalue=1e-119, Organism=Escherichia coli, GI1786293, Length=214, Percent_Identity=41.1214953271028, Blast_Score=163, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71994385, Length=479, Percent_Identity=35.4906054279749, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI71994389, Length=426, Percent_Identity=36.3849765258216, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17560440, Length=262, Percent_Identity=35.8778625954198, Blast_Score=161, Evalue=7e-40, Organism=Saccharomyces cerevisiae, GI6322012, Length=487, Percent_Identity=36.3449691991786, Blast_Score=289, Evalue=6e-79, Organism=Saccharomyces cerevisiae, GI6323464, Length=487, Percent_Identity=36.5503080082135, Blast_Score=280, Evalue=4e-76, Organism=Saccharomyces cerevisiae, GI6323585, Length=460, Percent_Identity=35.6521739130435, Blast_Score=278, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6319352, Length=340, Percent_Identity=35.8823529411765, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6319353, Length=142, Percent_Identity=37.3239436619718, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24641071, Length=486, Percent_Identity=35.3909465020576, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI24641073, Length=486, Percent_Identity=35.3909465020576, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI28571163, Length=445, Percent_Identity=35.9550561797753, Blast_Score=259, Evalue=3e-69,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51393; Mature: 51262
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFPLGLSFDDVLLLPRLSAILPGDADISSQLVPGFDMKIPVLSAAMDTVSESELAIAL CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE AREGGLAVIHRNNPIDIQAAMVSRVKRFENAVIPNPVTVNKDMTLEEVHQIMMDQGYSGF ECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC PVVDANRKLEGIITGRDMRGVDDYQNVQVKDVMTPLSRLITAAPITTIEEARHILYTHRI CEEECCCCEEEEEECCCCCCCCCHHCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EKLPLVDEHGVLAGLITETDIQKRAMFADASKDEHGHLRCGAAVGVGPDYLDRAKALISA HHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEECEECCCCHHHHHHHHHHHHC GADALFIDAATGHTTRVMDVVSNLRKLTDRPIVAGNVVTAEGAADLIKAGVQAIKVGVGP CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCEEECCCHHHHHHHCHHEEEEECCC GSICTTRVISGVGMPQFTAIQEVASVARPAGVTVIADGGIRYSGDIVKALAAGADLVMLG CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHCCCCHHHHH GLLAGTEESPGKVVHYQGRHFKQYRGMGSLGAMRRGSGDRYGQNSSGKLVAEGVEARVPY HHHCCCCCCCCCEEEECCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCH KGMLADVVFQLMGGLRSGMGYLGAHNLEELRNKARFVQITSGGLKESHPHDITITEEPVN HHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCC YSC CCC >Mature Secondary Structure ADFPLGLSFDDVLLLPRLSAILPGDADISSQLVPGFDMKIPVLSAAMDTVSESELAIAL CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE AREGGLAVIHRNNPIDIQAAMVSRVKRFENAVIPNPVTVNKDMTLEEVHQIMMDQGYSGF ECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC PVVDANRKLEGIITGRDMRGVDDYQNVQVKDVMTPLSRLITAAPITTIEEARHILYTHRI CEEECCCCEEEEEECCCCCCCCCHHCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EKLPLVDEHGVLAGLITETDIQKRAMFADASKDEHGHLRCGAAVGVGPDYLDRAKALISA HHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEECEECCCCHHHHHHHHHHHHC GADALFIDAATGHTTRVMDVVSNLRKLTDRPIVAGNVVTAEGAADLIKAGVQAIKVGVGP CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCEEECCCHHHHHHHCHHEEEEECCC GSICTTRVISGVGMPQFTAIQEVASVARPAGVTVIADGGIRYSGDIVKALAAGADLVMLG CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHCCCCHHHHH GLLAGTEESPGKVVHYQGRHFKQYRGMGSLGAMRRGSGDRYGQNSSGKLVAEGVEARVPY HHHCCCCCCCCCEEEECCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCH KGMLADVVFQLMGGLRSGMGYLGAHNLEELRNKARFVQITSGGLKESHPHDITITEEPVN HHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCC YSC CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]