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The map label for this gene is ddl [H]

Identifier: 187735236

GI number: 187735236

Start: 860791

End: 861816

Strand: Direct

Name: ddl [H]

Synonym: Amuc_0730

Alternate gene names: 187735236

Gene position: 860791-861816 (Clockwise)

Preceding gene: 187735235

Following gene: 187735242

Centisome position: 32.31

GC content: 53.7

Gene sequence:

>1026_bases
ATGTTTGAAATACCAGACATCCAACTCAATCAATATGGCAAGCCGGCAAGGATCATGTTCCTGGCTCCATATGCCCCAGA
CGCTCCCGATTTCTCCAAAAAACCCTACACAGGCAATGGAGGCTACCCTCAGTACCACTACAACATTTATAAAGCCATCC
AGGACATAGGCTACGACGTCGTCTCCTCCTCCAAACCCTATTCCGTCCAATTCGCCAAGGGAAACGTGGACTATGTATTC
TCCCTGATGAACAGGTTCGCCATGTCCAGGCCTGAAATATTCATTTCTTCTTACTGCGAATTCATTCAGGTTCCCTACCT
GGGCGCCCCGCCCAACATCCGCGCCATAGCGGAAGACAAATTTCTGACCAAAATGGTATTCCGCTCCCTGGAATTGAACG
TTCCGGAAGGCATTGGACTTTCCGGAGAAAAAGGTATTCCGGCCCAGGCCCCCTTCCCTGGCCCCTATTTTGTCAAAAAG
CGTTTTGGAGCCGCTTCCGGCGGCATCCGGGAAGACAGCATCTGCAGCTCCTGGAAAGCCGTGGGTTCATGCGCCCGGCG
CCTGATGGAAGAAGGGCACGAAGTGCTCGTGGAACAATACTGTGAAGGCATTGACGTCACCGTTCCCGTACTGGGTGGGG
AAAACCCCGTCATCCTGGGATATGTGCAGCCGAAATCCGACAAACCAGGCAGCATCATCACGGAAGACCTGAAACTGCAC
GACCATCTGGGTTATCAGCTGGTCTCCGTTCAGGATATGGAGCAGGACATCGCCAGTGACGTCCGGAAAATCTGGAGCGC
TCTGGGGCCGATGGACTATTTCCGCATCGACTATAGAATCGACTTCGAGACGGGAGAACGGCGCATTCTGGAAATGAACA
TCTGCTGCCACCTGGGCAAAAGCGGCTCCATCTGCCTGGCGGCCGCAGAACACGGCTACTCCCAGGCGGACCTCCTCAAA
TACATTATCGCCTACAGCATGGACAGGCAGAAAAACCTCCGCCAATACGGCACATGGCTCATCTGA

Upstream 100 bases:

>100_bases
CTACCTCCGGGGACGGCTATGCCGTCCCTTCTTTTTTATATTATTTGAACATGGCTGCCCATTCCATAATCCAAGAAACA
TTACACGCAATAGCCAAGCC

Downstream 100 bases:

>100_bases
CCCGCAGGAAAGAAGCGGTTCGCATTCCGGTCAGAACAAAAACGGCAGTTAGGAATCAGGTATCCGGCTGATTGCCTCAA
ACACCTCCTGCCAGCTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: D-Ala-D-Ala ligase; D-alanylalanine synthetase [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MFEIPDIQLNQYGKPARIMFLAPYAPDAPDFSKKPYTGNGGYPQYHYNIYKAIQDIGYDVVSSSKPYSVQFAKGNVDYVF
SLMNRFAMSRPEIFISSYCEFIQVPYLGAPPNIRAIAEDKFLTKMVFRSLELNVPEGIGLSGEKGIPAQAPFPGPYFVKK
RFGAASGGIREDSICSSWKAVGSCARRLMEEGHEVLVEQYCEGIDVTVPVLGGENPVILGYVQPKSDKPGSIITEDLKLH
DHLGYQLVSVQDMEQDIASDVRKIWSALGPMDYFRIDYRIDFETGERRILEMNICCHLGKSGSICLAAAEHGYSQADLLK
YIIAYSMDRQKNLRQYGTWLI

Sequences:

>Translated_341_residues
MFEIPDIQLNQYGKPARIMFLAPYAPDAPDFSKKPYTGNGGYPQYHYNIYKAIQDIGYDVVSSSKPYSVQFAKGNVDYVF
SLMNRFAMSRPEIFISSYCEFIQVPYLGAPPNIRAIAEDKFLTKMVFRSLELNVPEGIGLSGEKGIPAQAPFPGPYFVKK
RFGAASGGIREDSICSSWKAVGSCARRLMEEGHEVLVEQYCEGIDVTVPVLGGENPVILGYVQPKSDKPGSIITEDLKLH
DHLGYQLVSVQDMEQDIASDVRKIWSALGPMDYFRIDYRIDFETGERRILEMNICCHLGKSGSICLAAAEHGYSQADLLK
YIIAYSMDRQKNLRQYGTWLI
>Mature_341_residues
MFEIPDIQLNQYGKPARIMFLAPYAPDAPDFSKKPYTGNGGYPQYHYNIYKAIQDIGYDVVSSSKPYSVQFAKGNVDYVF
SLMNRFAMSRPEIFISSYCEFIQVPYLGAPPNIRAIAEDKFLTKMVFRSLELNVPEGIGLSGEKGIPAQAPFPGPYFVKK
RFGAASGGIREDSICSSWKAVGSCARRLMEEGHEVLVEQYCEGIDVTVPVLGGENPVILGYVQPKSDKPGSIITEDLKLH
DHLGYQLVSVQDMEQDIASDVRKIWSALGPMDYFRIDYRIDFETGERRILEMNICCHLGKSGSICLAAAEHGYSQADLLK
YIIAYSMDRQKNLRQYGTWLI

Specific function: Cell wall formation [H]

COG id: COG1181

COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR000291
- InterPro:   IPR005905
- InterPro:   IPR011095
- InterPro:   IPR011127
- InterPro:   IPR013817
- InterPro:   IPR016185 [H]

Pfam domain/function: PF07478 Dala_Dala_lig_C; PF01820 Dala_Dala_lig_N [H]

EC number: =6.3.2.4 [H]

Molecular weight: Translated: 38302; Mature: 38302

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEIPDIQLNQYGKPARIMFLAPYAPDAPDFSKKPYTGNGGYPQYHYNIYKAIQDIGYDV
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH
VSSSKPYSVQFAKGNVDYVFSLMNRFAMSRPEIFISSYCEFIQVPYLGAPPNIRAIAEDK
HCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHH
FLTKMVFRSLELNVPEGIGLSGEKGIPAQAPFPGPYFVKKRFGAASGGIREDSICSSWKA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHH
VGSCARRLMEEGHEVLVEQYCEGIDVTVPVLGGENPVILGYVQPKSDKPGSIITEDLKLH
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEHHHHHHH
DHLGYQLVSVQDMEQDIASDVRKIWSALGPMDYFRIDYRIDFETGERRILEMNICCHLGK
HHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEEEEEECCC
SGSICLAAAEHGYSQADLLKYIIAYSMDRQKNLRQYGTWLI
CCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MFEIPDIQLNQYGKPARIMFLAPYAPDAPDFSKKPYTGNGGYPQYHYNIYKAIQDIGYDV
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH
VSSSKPYSVQFAKGNVDYVFSLMNRFAMSRPEIFISSYCEFIQVPYLGAPPNIRAIAEDK
HCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHH
FLTKMVFRSLELNVPEGIGLSGEKGIPAQAPFPGPYFVKKRFGAASGGIREDSICSSWKA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHH
VGSCARRLMEEGHEVLVEQYCEGIDVTVPVLGGENPVILGYVQPKSDKPGSIITEDLKLH
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEHHHHHHH
DHLGYQLVSVQDMEQDIASDVRKIWSALGPMDYFRIDYRIDFETGERRILEMNICCHLGK
HHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEEEEEECCC
SGSICLAAAEHGYSQADLLKYIIAYSMDRQKNLRQYGTWLI
CCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA