Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735235
Identifier: 187735235
GI number: 187735235
Start: 859506
End: 860663
Strand: Direct
Name: 187735235
Synonym: Amuc_0729
Alternate gene names: NA
Gene position: 859506-860663 (Clockwise)
Preceding gene: 187735234
Following gene: 187735236
Centisome position: 32.26
GC content: 54.92
Gene sequence:
>1158_bases ATGACAGCCCCTCTCTCCGTAACGACAGCTTCCGACCAGCTTCTGTGCCGTATCGCCGGAATTGGAGACCTCTTCGCCAT TGAAGGGGAATTCGTCACCGGGAAGGAAATACCCAGCGGACACATCAACACCACTTACAAGGCTACCTACCGTAAAAGCG ACGGGACGGAAGATTCCTATATCCTCCAGCGCATTAACGATTACGTCTTCAAAGACCCCAAAGCCGTCATGCGCAACGTG GAAAAAGTCACGCGCCACATCAACTGGAAAGTCCTGCGCCGCCTGAAGGATTCCGCCGGCCAAACCCTCAACCTCTACCC GGCCCGGGGAGGACGCAACTACATTGACATCCCCGGTGACGGCATCTGGCGCTGTTACAACTACCTGGCCGGCACGCACA CCTACGACGTGGTGGAAAACACCCGCCAGGCCTACCAGGCAGGATTTGCCTTTGGGTCCTTCCAGGATTTGATTAGTGAC ATGAATCCGGACGACATCGTGGAAACCATACCTGGCTTCCATCATACCCGGAACCGCTTCAACCGCCTGATGGAAGTGGC GGAGCTGGATCCGCAGGGGCGTCTCTCCACCTGTCTGCCTGAATTGGAATTCATTAAAGCCCGAGAGCAGGATGTGGATC GGTTGCTGAATCTTCAGGAAAGAGGTGTTCTTCCCACCCGCATCACTCATAACGACACCAAAATCAACAATGTCATGCTG GATGAGGACACCGACCACGCCGTCTGCGTCATTGACCTGGATACGGTCATGCCCGGCCTTGTACTGTACGACTTCGGAGA TATGGTGCGCACCGTCACTCCGCCTACGGAAGAAGATGAAGAAGACCTGGACAAGGTGCGCATGCGCATGCCCATGTTCC AATCTATCGTAGAAGGGTATCTGACCGCTGCCCACGGCTTCCTGACCCAGGCGGAAATAGACCAGCTTGCCTTTTCAGGA AAACTCATCACGCTGGAAATCGGCATCCGTTTCCTGACGGACTATCTGGAAGGCGACCCATACTTCAAGGTCTCACGGCC GAACCACAATCTCATCCGCTGCCGTACGCAGCTAAAACTGGTGGAATGCATTGAACAGGAACTTCCTGCCATGGAACAAT ACGTCAAGCGCGTCGCCAGGGGGATGTCCAGAAAATAG
Upstream 100 bases:
>100_bases ATGGAGACGGTATTTCCCGGCTCAGGAACAGGCTTGATGAGCTTGTAGGTTATAAATTCATCCGTTAACTTATTCATTCA ACTTTCTTTCAACCTTTGAC
Downstream 100 bases:
>100_bases GGAAAAGCTTTTCCTTCTTCCATTCCACTACCTCCGGGGACGGCTATGCCGTCCCTTCTTTTTTATATTATTTGAACATG GCTGCCCATTCCATAATCCA
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Mucin-Desulfating Sulfatase; Desulfatase Possibly For Mucin; N-Acetylhexosamine-1-Kinase NahK; Phosphotransferase Family Protein; Phosphotransferase Family; Homoserine/Choline Kinase Family Protein; Desulfatase; Phosphotransferase Family Protein; Phosphotransferase
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTAPLSVTTASDQLLCRIAGIGDLFAIEGEFVTGKEIPSGHINTTYKATYRKSDGTEDSYILQRINDYVFKDPKAVMRNV EKVTRHINWKVLRRLKDSAGQTLNLYPARGGRNYIDIPGDGIWRCYNYLAGTHTYDVVENTRQAYQAGFAFGSFQDLISD MNPDDIVETIPGFHHTRNRFNRLMEVAELDPQGRLSTCLPELEFIKAREQDVDRLLNLQERGVLPTRITHNDTKINNVML DEDTDHAVCVIDLDTVMPGLVLYDFGDMVRTVTPPTEEDEEDLDKVRMRMPMFQSIVEGYLTAAHGFLTQAEIDQLAFSG KLITLEIGIRFLTDYLEGDPYFKVSRPNHNLIRCRTQLKLVECIEQELPAMEQYVKRVARGMSRK
Sequences:
>Translated_385_residues MTAPLSVTTASDQLLCRIAGIGDLFAIEGEFVTGKEIPSGHINTTYKATYRKSDGTEDSYILQRINDYVFKDPKAVMRNV EKVTRHINWKVLRRLKDSAGQTLNLYPARGGRNYIDIPGDGIWRCYNYLAGTHTYDVVENTRQAYQAGFAFGSFQDLISD MNPDDIVETIPGFHHTRNRFNRLMEVAELDPQGRLSTCLPELEFIKAREQDVDRLLNLQERGVLPTRITHNDTKINNVML DEDTDHAVCVIDLDTVMPGLVLYDFGDMVRTVTPPTEEDEEDLDKVRMRMPMFQSIVEGYLTAAHGFLTQAEIDQLAFSG KLITLEIGIRFLTDYLEGDPYFKVSRPNHNLIRCRTQLKLVECIEQELPAMEQYVKRVARGMSRK >Mature_384_residues TAPLSVTTASDQLLCRIAGIGDLFAIEGEFVTGKEIPSGHINTTYKATYRKSDGTEDSYILQRINDYVFKDPKAVMRNVE KVTRHINWKVLRRLKDSAGQTLNLYPARGGRNYIDIPGDGIWRCYNYLAGTHTYDVVENTRQAYQAGFAFGSFQDLISDM NPDDIVETIPGFHHTRNRFNRLMEVAELDPQGRLSTCLPELEFIKAREQDVDRLLNLQERGVLPTRITHNDTKINNVMLD EDTDHAVCVIDLDTVMPGLVLYDFGDMVRTVTPPTEEDEEDLDKVRMRMPMFQSIVEGYLTAAHGFLTQAEIDQLAFSGK LITLEIGIRFLTDYLEGDPYFKVSRPNHNLIRCRTQLKLVECIEQELPAMEQYVKRVARGMSRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43955; Mature: 43823
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPLSVTTASDQLLCRIAGIGDLFAIEGEFVTGKEIPSGHINTTYKATYRKSDGTEDSY CCCCCEEECCCHHHHHEEECCCCEEEECCCEEECCCCCCCCCCCCEEEEEECCCCCCHHH ILQRINDYVFKDPKAVMRNVEKVTRHINWKVLRRLKDSAGQTLNLYPARGGRNYIDIPGD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCC GIWRCYNYLAGTHTYDVVENTRQAYQAGFAFGSFQDLISDMNPDDIVETIPGFHHTRNRF HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCHHHHHHHH NRLMEVAELDPQGRLSTCLPELEFIKAREQDVDRLLNLQERGVLPTRITHNDTKINNVML HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEECCCCCEECEEEE DEDTDHAVCVIDLDTVMPGLVLYDFGDMVRTVTPPTEEDEEDLDKVRMRMPMFQSIVEGY CCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTAAHGFLTQAEIDQLAFSGKLITLEIGIRFLTDYLEGDPYFKVSRPNHNLIRCRTQLKL HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHH VECIEQELPAMEQYVKRVARGMSRK HHHHHHHCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAPLSVTTASDQLLCRIAGIGDLFAIEGEFVTGKEIPSGHINTTYKATYRKSDGTEDSY CCCCEEECCCHHHHHEEECCCCEEEECCCEEECCCCCCCCCCCCEEEEEECCCCCCHHH ILQRINDYVFKDPKAVMRNVEKVTRHINWKVLRRLKDSAGQTLNLYPARGGRNYIDIPGD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCC GIWRCYNYLAGTHTYDVVENTRQAYQAGFAFGSFQDLISDMNPDDIVETIPGFHHTRNRF HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCHHHHHHHH NRLMEVAELDPQGRLSTCLPELEFIKAREQDVDRLLNLQERGVLPTRITHNDTKINNVML HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEECCCCCEECEEEE DEDTDHAVCVIDLDTVMPGLVLYDFGDMVRTVTPPTEEDEEDLDKVRMRMPMFQSIVEGY CCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTAAHGFLTQAEIDQLAFSGKLITLEIGIRFLTDYLEGDPYFKVSRPNHNLIRCRTQLKL HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHH VECIEQELPAMEQYVKRVARGMSRK HHHHHHHCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA