| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is bglA [H]
Identifier: 187735230
GI number: 187735230
Start: 855308
End: 856180
Strand: Reverse
Name: bglA [H]
Synonym: Amuc_0724
Alternate gene names: 187735230
Gene position: 856180-855308 (Counterclockwise)
Preceding gene: 187735232
Following gene: 187735228
Centisome position: 32.14
GC content: 49.83
Gene sequence:
>873_bases ATGTCTGTAAAGGGAGAAGATTCCAAACCTCCGAGGACCCTCCCCGGCGGGTGGGTTTATGTCTGGGGTGACGAGTTCAA CGGTTCCAGGATAGACGCCAAAAAGTGGAAACCGGAGTTGGGAGTAATCCGTAACCAGGGCTCCCAGCAGACTTATACAG GCCGACCCAAGAATATGAGATTGGAGGATGGCTGCCTGGTTTTGGAAACCCATTTTGAAAAGTTCGCCAATGTCAATTAT AAGAAAAGTTCCGCGGATTGGATCAAGAATACCAAGTTCATGCCCTATACCTCCGGTTCCGTTACGACGATCAAAACAAA AAATTTCATGTTCGGCAGACTGGAAGTGCGTGCCAAGGTTCCCAAAACCAAGGGCATCTGGCCTGCCATCTGGTTGCTTG GCAAGAATAAATGGGGCTGGCCCGTCAACGGGGAGATTGATATGCTGGAGAATATTTCCCAACAGCCGGATGTGGTTTAT TCCACTTTCCACTTGAGTCCGGACGGCGTGTCCACAAGGGACGCTTCCCGCGGAGGGACTGTGAAGATAGAGAATCTTTC CGATGATTTTCATACCTATGTCATGGAATGGGACAAGGATTCCATCAAGTTGATGGTGGATGACAAGCTGGTGAAGTCCA TTGACCTTAATACCACTAATTATGCCAATGGGGCGGGGAATCCGTTCCGTACGCCGTTCTATCTCATTCTCAATTCCGCC GTGGGCGGCACCTGGTGCGAGAAAGCTCCTAAAGACGGGCAAGGGTATCCTGTAAAATTCCTGATTGATTACGTTCGGTT CTATCAGACGAAAGAACATGCCCAGCAGGCTAAGCAGTTTGACCCGGAAACCGGCCTGCCCAAGAAGAAATAG
Upstream 100 bases:
>100_bases GTCCCGAATGATGTATTTTGTTTGAAAGGCTGCGGAACTAGGTGCAGTATTGCTCCGTATGAAGAGCCTATTTGCCGTGT TGTTGACTGCATGCCTTTGC
Downstream 100 bases:
>100_bases CCTTTTTTCAGGTTGAGGCATGTCCGGCGTGGCGGCCGGACATGCAAGATGTCGCTTGCCTTGTCATTTCACAAGCGACG CGGCTTTTCATACTGGATTC
Product: Glucan endo-1,3-beta-D-glucosidase
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSVKGEDSKPPRTLPGGWVYVWGDEFNGSRIDAKKWKPELGVIRNQGSQQTYTGRPKNMRLEDGCLVLETHFEKFANVNY KKSSADWIKNTKFMPYTSGSVTTIKTKNFMFGRLEVRAKVPKTKGIWPAIWLLGKNKWGWPVNGEIDMLENISQQPDVVY STFHLSPDGVSTRDASRGGTVKIENLSDDFHTYVMEWDKDSIKLMVDDKLVKSIDLNTTNYANGAGNPFRTPFYLILNSA VGGTWCEKAPKDGQGYPVKFLIDYVRFYQTKEHAQQAKQFDPETGLPKKK
Sequences:
>Translated_290_residues MSVKGEDSKPPRTLPGGWVYVWGDEFNGSRIDAKKWKPELGVIRNQGSQQTYTGRPKNMRLEDGCLVLETHFEKFANVNY KKSSADWIKNTKFMPYTSGSVTTIKTKNFMFGRLEVRAKVPKTKGIWPAIWLLGKNKWGWPVNGEIDMLENISQQPDVVY STFHLSPDGVSTRDASRGGTVKIENLSDDFHTYVMEWDKDSIKLMVDDKLVKSIDLNTTNYANGAGNPFRTPFYLILNSA VGGTWCEKAPKDGQGYPVKFLIDYVRFYQTKEHAQQAKQFDPETGLPKKK >Mature_289_residues SVKGEDSKPPRTLPGGWVYVWGDEFNGSRIDAKKWKPELGVIRNQGSQQTYTGRPKNMRLEDGCLVLETHFEKFANVNYK KSSADWIKNTKFMPYTSGSVTTIKTKNFMFGRLEVRAKVPKTKGIWPAIWLLGKNKWGWPVNGEIDMLENISQQPDVVYS TFHLSPDGVSTRDASRGGTVKIENLSDDFHTYVMEWDKDSIKLMVDDKLVKSIDLNTTNYANGAGNPFRTPFYLILNSAV GGTWCEKAPKDGQGYPVKFLIDYVRFYQTKEHAQQAKQFDPETGLPKKK
Specific function: Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan [H]
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 32978; Mature: 32847
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKGEDSKPPRTLPGGWVYVWGDEFNGSRIDAKKWKPELGVIRNQGSQQTYTGRPKNMR CCCCCCCCCCCCCCCCCEEEEECCCCCCCEECHHHCCCCCCCEECCCCCCCCCCCCCCCE LEDGCLVLETHFEKFANVNYKKSSADWIKNTKFMPYTSGSVTTIKTKNFMFGRLEVRAKV ECCCEEEEEEHHHHHHCCCCCCCCHHHHHCCCCCEECCCCEEEEEECCEEEEEEEEEEEC PKTKGIWPAIWLLGKNKWGWPVNGEIDMLENISQQPDVVYSTFHLSPDGVSTRDASRGGT CCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCE VKIENLSDDFHTYVMEWDKDSIKLMVDDKLVKSIDLNTTNYANGAGNPFRTPFYLILNSA EEEECCCCCCEEEEEEECCCCEEEEECCHHHHEECCCCCCCCCCCCCCCCCCEEEEEECC VGGTWCEKAPKDGQGYPVKFLIDYVRFYQTKEHAQQAKQFDPETGLPKKK CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SVKGEDSKPPRTLPGGWVYVWGDEFNGSRIDAKKWKPELGVIRNQGSQQTYTGRPKNMR CCCCCCCCCCCCCCCCEEEEECCCCCCCEECHHHCCCCCCCEECCCCCCCCCCCCCCCE LEDGCLVLETHFEKFANVNYKKSSADWIKNTKFMPYTSGSVTTIKTKNFMFGRLEVRAKV ECCCEEEEEEHHHHHHCCCCCCCCHHHHHCCCCCEECCCCEEEEEECCEEEEEEEEEEEC PKTKGIWPAIWLLGKNKWGWPVNGEIDMLENISQQPDVVYSTFHLSPDGVSTRDASRGGT CCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCE VKIENLSDDFHTYVMEWDKDSIKLMVDDKLVKSIDLNTTNYANGAGNPFRTPFYLILNSA EEEECCCCCCEEEEEEECCCCEEEEECCHHHHEECCCCCCCCCCCCCCCCCCEEEEEECC VGGTWCEKAPKDGQGYPVKFLIDYVRFYQTKEHAQQAKQFDPETGLPKKK CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7925416 [H]