| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735232
Identifier: 187735232
GI number: 187735232
Start: 856939
End: 857535
Strand: Reverse
Name: 187735232
Synonym: Amuc_0726
Alternate gene names: NA
Gene position: 857535-856939 (Counterclockwise)
Preceding gene: 187735237
Following gene: 187735230
Centisome position: 32.19
GC content: 52.09
Gene sequence:
>597_bases ATGCCACGCCTTTCCATCCACCTTCCCGACGGTTCTGAAAAAACCATAGTTCTTCCGAAGAACGGTGAATATTTCGCACG CATCGGACGTGACGAGCATTGCGAGATTGTGCTTCCCTTTCAGTCGGTTTCCGGAGAGCATGCCTTGCTTCAGTTTAAGG AAGGGGGATATGTCCTGGAGGACCTTGGTTCTACTAATGGAACTAAAATCAACGGCCTGACGCCGATGGGCGCCGCAACC CTTTACGATGGCGATGAAATCGCTTTGGGGGATGCCAGGCTCCGGTTTGCGGAAGAGCCATCTCCGGGATTTTCTGCCGA ATTATCCGGGAGAGAAGAAGAGGCCGCTCCTTCGATCGCTATGCGGAACTTACAGCAGTTGGCGGATGAAGCCGCCCGCA CGACCCGGAATCATTATTTATGGATGGCCCTTTATGCCGTCCTGATATTTTTTCTGGCTGTGTTTGCCGGATTAACCTAC AAACATTACAGGGTAACGGGTGAATTGCTGCCTCTTCAATGGCTGGGTATTGAATCCCCCAAGGCCGCCTTGAAATCCAT GCCTCTTCCTCAGACGGAAAACGGTATGCAGCTCTGA
Upstream 100 bases:
>100_bases TTCTGGGGAAAGGCGGATATCGCCATTTTTCTTATACGTGATGGGCAAACGGTCTTTTGGATTGAAAATGAATATGGGCG TGGCATGATTTCCAGGAATC
Downstream 100 bases:
>100_bases CCGGAATTTTCCAGTCCTGCCGTTTTATGGACTGGCCGGAGTATTTCCGGGCATGCGTTCCACATCCGTGAATAATGTGA AAGGAGTGGCGGAGCCCTGT
Product: FHA domain containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPRLSIHLPDGSEKTIVLPKNGEYFARIGRDEHCEIVLPFQSVSGEHALLQFKEGGYVLEDLGSTNGTKINGLTPMGAAT LYDGDEIALGDARLRFAEEPSPGFSAELSGREEEAAPSIAMRNLQQLADEAARTTRNHYLWMALYAVLIFFLAVFAGLTY KHYRVTGELLPLQWLGIESPKAALKSMPLPQTENGMQL
Sequences:
>Translated_198_residues MPRLSIHLPDGSEKTIVLPKNGEYFARIGRDEHCEIVLPFQSVSGEHALLQFKEGGYVLEDLGSTNGTKINGLTPMGAAT LYDGDEIALGDARLRFAEEPSPGFSAELSGREEEAAPSIAMRNLQQLADEAARTTRNHYLWMALYAVLIFFLAVFAGLTY KHYRVTGELLPLQWLGIESPKAALKSMPLPQTENGMQL >Mature_197_residues PRLSIHLPDGSEKTIVLPKNGEYFARIGRDEHCEIVLPFQSVSGEHALLQFKEGGYVLEDLGSTNGTKINGLTPMGAATL YDGDEIALGDARLRFAEEPSPGFSAELSGREEEAAPSIAMRNLQQLADEAARTTRNHYLWMALYAVLIFFLAVFAGLTYK HYRVTGELLPLQWLGIESPKAALKSMPLPQTENGMQL
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21807; Mature: 21676
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLSIHLPDGSEKTIVLPKNGEYFARIGRDEHCEIVLPFQSVSGEHALLQFKEGGYVLE CCCEEEECCCCCCCEEEEECCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCEEEE DLGSTNGTKINGLTPMGAATLYDGDEIALGDARLRFAEEPSPGFSAELSGREEEAAPSIA CCCCCCCCEECCCCCCCCEEEECCCEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHH MRNLQQLADEAARTTRNHYLWMALYAVLIFFLAVFAGLTYKHYRVTGELLPLQWLGIESP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECEECEEEEECCCCH KAALKSMPLPQTENGMQL HHHHHCCCCCCCCCCCCC >Mature Secondary Structure PRLSIHLPDGSEKTIVLPKNGEYFARIGRDEHCEIVLPFQSVSGEHALLQFKEGGYVLE CCEEEECCCCCCCEEEEECCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCEEEE DLGSTNGTKINGLTPMGAATLYDGDEIALGDARLRFAEEPSPGFSAELSGREEEAAPSIA CCCCCCCCEECCCCCCCCEEEECCCEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHH MRNLQQLADEAARTTRNHYLWMALYAVLIFFLAVFAGLTYKHYRVTGELLPLQWLGIESP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECEECEEEEECCCCH KAALKSMPLPQTENGMQL HHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA