Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is ppaX [H]
Identifier: 187735224
GI number: 187735224
Start: 847267
End: 847932
Strand: Direct
Name: ppaX [H]
Synonym: Amuc_0718
Alternate gene names: 187735224
Gene position: 847267-847932 (Clockwise)
Preceding gene: 187735222
Following gene: 187735225
Centisome position: 31.8
GC content: 54.65
Gene sequence:
>666_bases ATGATCAAAACCGCCATTTTTGATTTTGACGGAACTCTTGCCGACACCATACCCCTGTGCCGGGAGGCTTTTCGCCGCGC TATCCGGAAGCTGGACGGCAGAATATTGACGGATGAAGAAATCGAACGCCAATTCGGCCCGGACGATCTGGGAGTTATCC AGAAATTGATTCCCGGGAAACCGGAACTGCATGAACGCGGCAGGGAACTATTTATCCACTATTACCGCAAGCTGCACGCA GACCTGGCTCCCGCCCCCTTTCCCGGAACAGCCGAATTGCTGAGCACTCTCCGCAACCTCGGCATTCGGCTGGCCATGGT CACAGGCAAACGCCTGGAAAGCGCAGAGATATCCCTCCAGTTTTTTCATCTGTCCGAATTTTTTCCTATTCTGGAAACAG GCTCCCCGGAGGGAGGCGTAAAACCGGACCGCATCAAACGGGCTTTGTCCCGTCTGAATGCCGTCGCCTCAGAAGCCATC TATATTGGAGACGCCCCCACAGACGTGGACGCATGCCGCTCTGTCCCTATCCGCATTCTCTCCGCAGGATGGGCCGAGGA GGCGGACATCAACGGCCTCAGGGAAAAAAAGCCGGACTTTCTCCTGACCCGTTTTGAAGACCTGGAACGTTTCTTCCGGG AACATCATGAAAATGAAGGCCTTTAA
Upstream 100 bases:
>100_bases GACACGTCCTGCTTATTCATCCGTCCTGCAGCCCCATCATGACTATTCCGGCACGGCTTTCCCCTTGAACCGTCCGTTGT CGGCATGTAGGGTACGGCTG
Downstream 100 bases:
>100_bases GATTGCAATCCTGCAGAAAACAGGCTATCATTACCCACCCCGTTAATATCAATCCTTCCATGACTTTTCAGAAAGAATCC GGAAAAGAGGGCCTGAAAAT
Product: HAD-superfamily hydrolase, subfamily IA, variant 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MIKTAIFDFDGTLADTIPLCREAFRRAIRKLDGRILTDEEIERQFGPDDLGVIQKLIPGKPELHERGRELFIHYYRKLHA DLAPAPFPGTAELLSTLRNLGIRLAMVTGKRLESAEISLQFFHLSEFFPILETGSPEGGVKPDRIKRALSRLNAVASEAI YIGDAPTDVDACRSVPIRILSAGWAEEADINGLREKKPDFLLTRFEDLERFFREHHENEGL
Sequences:
>Translated_221_residues MIKTAIFDFDGTLADTIPLCREAFRRAIRKLDGRILTDEEIERQFGPDDLGVIQKLIPGKPELHERGRELFIHYYRKLHA DLAPAPFPGTAELLSTLRNLGIRLAMVTGKRLESAEISLQFFHLSEFFPILETGSPEGGVKPDRIKRALSRLNAVASEAI YIGDAPTDVDACRSVPIRILSAGWAEEADINGLREKKPDFLLTRFEDLERFFREHHENEGL >Mature_221_residues MIKTAIFDFDGTLADTIPLCREAFRRAIRKLDGRILTDEEIERQFGPDDLGVIQKLIPGKPELHERGRELFIHYYRKLHA DLAPAPFPGTAELLSTLRNLGIRLAMVTGKRLESAEISLQFFHLSEFFPILETGSPEGGVKPDRIKRALSRLNAVASEAI YIGDAPTDVDACRSVPIRILSAGWAEEADINGLREKKPDFLLTRFEDLERFFREHHENEGL
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 25023; Mature: 25023
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTAIFDFDGTLADTIPLCREAFRRAIRKLDGRILTDEEIERQFGPDDLGVIQKLIPGK CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCCC PELHERGRELFIHYYRKLHADLAPAPFPGTAELLSTLRNLGIRLAMVTGKRLESAEISLQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHEEE FFHLSEFFPILETGSPEGGVKPDRIKRALSRLNAVASEAIYIGDAPTDVDACRSVPIRIL EEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHCCCHHHH SAGWAEEADINGLREKKPDFLLTRFEDLERFFREHHENEGL HCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIKTAIFDFDGTLADTIPLCREAFRRAIRKLDGRILTDEEIERQFGPDDLGVIQKLIPGK CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCCC PELHERGRELFIHYYRKLHADLAPAPFPGTAELLSTLRNLGIRLAMVTGKRLESAEISLQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHEEE FFHLSEFFPILETGSPEGGVKPDRIKRALSRLNAVASEAIYIGDAPTDVDACRSVPIRIL EEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHCCCHHHH SAGWAEEADINGLREKKPDFLLTRFEDLERFFREHHENEGL HCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]