Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is thiG [H]
Identifier: 187735222
GI number: 187735222
Start: 844986
End: 845768
Strand: Direct
Name: thiG [H]
Synonym: Amuc_0716
Alternate gene names: 187735222
Gene position: 844986-845768 (Clockwise)
Preceding gene: 187735221
Following gene: 187735224
Centisome position: 31.72
GC content: 61.56
Gene sequence:
>783_bases ATGACAGACACACCTTTGCAGATAGCCGGACGCCAGTTCACCTCCCGCCTGATGGTGGGAACGGGAAAATTTCCTTCCAA TGAAAGCATGAAAGAAGCTCTGGAAGCCTCCGGCGCCCAAATTGTGACGGTGGCTCTGCGCCGGGCGGATCTGACGGGTT CCCACGATCCCGCCGCCAATATTCTGGATTTCATTGAGCCGGAAAAATACCTCCTTCTCCCCAACACCAGCGGAGCGACT ACGGCAGAAGAAGCCGTACGCCTGGCGCGCCTGGCGGCAGCAGCCGGGTTGCCCAACTGGATCAAGCTGGAGATTCACCC GGACGCTCAGTACCTGATGCCGGACCCCATTGAAACGCTGAAAGCGGCGGAAATCCTGGTCAGGGAAGGCTTCACCGTGC TTCCCTACATTAACGCGGACCCCGTGCTCGCCAAACGCCTTCAGGAAGCCGGAGCGGCGGCCGTCATGCCTCTTGGCGCC CCCATCGGCACCAACAAGGGAGTGCTGACCCGGGAGTTGATTAACATCATCATTGAACAGGCTATTGTCCCCGTGGTGGT GGACGCGGGGCTGGGAGCGCCCAGCCACGCGGCGGAGGCTCTGGAAATGGGAGCGGATGCCGTGCTCGTCAATACGGCTA TCGCCGCCTCCGGCTCTCCCTCCGCCATGGCGGAGGCGTTCGCCCTGGCATGCCGTGCCGGACGCATGGCTTATCTGTCC GGCCTTCCCGCCGTTTCCTCCAAAGCTACAGCCACCAGCCCCCTGACTTCCTTCCTGCATTAA
Upstream 100 bases:
>100_bases GCCCTTCCCGGGCCATGTTCCGTTCAGCCGTCATGCTGCCCCCCCTCTTATTCATTCTCCCTTGCCTGAAAAGGTAAGCG GAGGTACCCTCCATCCCGCA
Downstream 100 bases:
>100_bases AAGGCCGGGAAAAAGCCCCGGTTTTCTCCCGCACCCATGGGTCAAGAAACTCCGGGAACATTTTTCGCAATCTTCCTGCG TATTAGGAATTCCAGGATGA
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTDTPLQIAGRQFTSRLMVGTGKFPSNESMKEALEASGAQIVTVALRRADLTGSHDPAANILDFIEPEKYLLLPNTSGAT TAEEAVRLARLAAAAGLPNWIKLEIHPDAQYLMPDPIETLKAAEILVREGFTVLPYINADPVLAKRLQEAGAAAVMPLGA PIGTNKGVLTRELINIIIEQAIVPVVVDAGLGAPSHAAEALEMGADAVLVNTAIAASGSPSAMAEAFALACRAGRMAYLS GLPAVSSKATATSPLTSFLH
Sequences:
>Translated_260_residues MTDTPLQIAGRQFTSRLMVGTGKFPSNESMKEALEASGAQIVTVALRRADLTGSHDPAANILDFIEPEKYLLLPNTSGAT TAEEAVRLARLAAAAGLPNWIKLEIHPDAQYLMPDPIETLKAAEILVREGFTVLPYINADPVLAKRLQEAGAAAVMPLGA PIGTNKGVLTRELINIIIEQAIVPVVVDAGLGAPSHAAEALEMGADAVLVNTAIAASGSPSAMAEAFALACRAGRMAYLS GLPAVSSKATATSPLTSFLH >Mature_259_residues TDTPLQIAGRQFTSRLMVGTGKFPSNESMKEALEASGAQIVTVALRRADLTGSHDPAANILDFIEPEKYLLLPNTSGATT AEEAVRLARLAAAAGLPNWIKLEIHPDAQYLMPDPIETLKAAEILVREGFTVLPYINADPVLAKRLQEAGAAAVMPLGAP IGTNKGVLTRELINIIIEQAIVPVVVDAGLGAPSHAAEALEMGADAVLVNTAIAASGSPSAMAEAFALACRAGRMAYLSG LPAVSSKATATSPLTSFLH
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=254, Percent_Identity=61.8110236220472, Blast_Score=293, Evalue=7e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 27029; Mature: 26898
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPLQIAGRQFTSRLMVGTGKFPSNESMKEALEASGAQIVTVALRRADLTGSHDPAAN CCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCHHH ILDFIEPEKYLLLPNTSGATTAEEAVRLARLAAAAGLPNWIKLEIHPDAQYLMPDPIETL HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH KAAEILVREGFTVLPYINADPVLAKRLQEAGAAAVMPLGAPIGTNKGVLTRELINIIIEQ HHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH AIVPVVVDAGLGAPSHAAEALEMGADAVLVNTAIAASGSPSAMAEAFALACRAGRMAYLS HHHHHHEECCCCCCHHHHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCCHHHHH GLPAVSSKATATSPLTSFLH CCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure TDTPLQIAGRQFTSRLMVGTGKFPSNESMKEALEASGAQIVTVALRRADLTGSHDPAAN CCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCHHH ILDFIEPEKYLLLPNTSGATTAEEAVRLARLAAAAGLPNWIKLEIHPDAQYLMPDPIETL HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH KAAEILVREGFTVLPYINADPVLAKRLQEAGAAAVMPLGAPIGTNKGVLTRELINIIIEQ HHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH AIVPVVVDAGLGAPSHAAEALEMGADAVLVNTAIAASGSPSAMAEAFALACRAGRMAYLS HHHHHHEECCCCCCHHHHHHHHHCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCCHHHHH GLPAVSSKATATSPLTSFLH CCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA