Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735221
Identifier: 187735221
GI number: 187735221
Start: 844238
End: 844879
Strand: Direct
Name: 187735221
Synonym: Amuc_0715
Alternate gene names: NA
Gene position: 844238-844879 (Clockwise)
Preceding gene: 187735220
Following gene: 187735222
Centisome position: 31.69
GC content: 56.07
Gene sequence:
>642_bases ATGGATTTACTGGCATACATGCTCGCCTCCGGAGGCGATGACAATAGCCTGAAACTCTGGTTCTGGCTGATTGTCGGGGT GATTTTCCTCATCAAAAAAGCAATCGAATTGTTGAAACCGGATGAAAAGGATGAGGAACCGTCCGTTCCGGACACGGAGA ACCATCATGAAAAACGCGTAAGGGAAGTCATTGCGGAAATGCGCCGGGCAACCCCGCAGCCACAGCAAACCCAACCTGCC GCACCGGCCCGCGCACCGCGGCCCTCAGCCCCTCCTGTAGAGCTTCCCTCCCCCGCCGTGGCCCGCAAACCGCAGCCGAT CCCGGCGCCGGCGGCTGCACAACCCGAGGAAACAGCCCGGCAGACGGCGCAAAATGTACTGGAACGCTACGTAAAAGCTA CGGAAGAAGCCCGGCAATCCATGCGCTCTCTTTCCGATGCGGAACAGGCGGCTCTGCAACGTTTGCAAAAGAGGGAGATG AAGGAACATCTGCCCGACCTTCTTCCGTCATCAGCCGCAGTGGAATCTCCTTCCCTGAAAAATTCCCTTCACCACCCCAA ATCCCTGAAAGCGGCTATTCTTTATCAGGAAATCCTTGGGAAACCCAGAGCATTACGAAACGCATCCTTCAGCGGTGAAT AA
Upstream 100 bases:
>100_bases AGATTCCATCGCTCAACCGGATACGCCTCCCTCTTCCATCAAATAAATAAATTCCCTGGTTTCCGGAAAGGCCTGCTTTT TCCGGAAACCTTTATCCTTT
Downstream 100 bases:
>100_bases AGAATGGCCCTTCCCGGGCCATGTTCCGTTCAGCCGTCATGCTGCCCCCCCTCTTATTCATTCTCCCTTGCCTGAAAAGG TAAGCGGAGGTACCCTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MDLLAYMLASGGDDNSLKLWFWLIVGVIFLIKKAIELLKPDEKDEEPSVPDTENHHEKRVREVIAEMRRATPQPQQTQPA APARAPRPSAPPVELPSPAVARKPQPIPAPAAAQPEETARQTAQNVLERYVKATEEARQSMRSLSDAEQAALQRLQKREM KEHLPDLLPSSAAVESPSLKNSLHHPKSLKAAILYQEILGKPRALRNASFSGE
Sequences:
>Translated_213_residues MDLLAYMLASGGDDNSLKLWFWLIVGVIFLIKKAIELLKPDEKDEEPSVPDTENHHEKRVREVIAEMRRATPQPQQTQPA APARAPRPSAPPVELPSPAVARKPQPIPAPAAAQPEETARQTAQNVLERYVKATEEARQSMRSLSDAEQAALQRLQKREM KEHLPDLLPSSAAVESPSLKNSLHHPKSLKAAILYQEILGKPRALRNASFSGE >Mature_213_residues MDLLAYMLASGGDDNSLKLWFWLIVGVIFLIKKAIELLKPDEKDEEPSVPDTENHHEKRVREVIAEMRRATPQPQQTQPA APARAPRPSAPPVELPSPAVARKPQPIPAPAAAQPEETARQTAQNVLERYVKATEEARQSMRSLSDAEQAALQRLQKREM KEHLPDLLPSSAAVESPSLKNSLHHPKSLKAAILYQEILGKPRALRNASFSGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23619; Mature: 23619
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLAYMLASGGDDNSLKLWFWLIVGVIFLIKKAIELLKPDEKDEEPSVPDTENHHEKRV CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH REVIAEMRRATPQPQQTQPAAPARAPRPSAPPVELPSPAVARKPQPIPAPAAAQPEETAR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHH QTAQNVLERYVKATEEARQSMRSLSDAEQAALQRLQKREMKEHLPDLLPSSAAVESPSLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH NSLHHPKSLKAAILYQEILGKPRALRNASFSGE HHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCC >Mature Secondary Structure MDLLAYMLASGGDDNSLKLWFWLIVGVIFLIKKAIELLKPDEKDEEPSVPDTENHHEKRV CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH REVIAEMRRATPQPQQTQPAAPARAPRPSAPPVELPSPAVARKPQPIPAPAAAQPEETAR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHH QTAQNVLERYVKATEEARQSMRSLSDAEQAALQRLQKREMKEHLPDLLPSSAAVESPSLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH NSLHHPKSLKAAILYQEILGKPRALRNASFSGE HHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA