Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735210
Identifier: 187735210
GI number: 187735210
Start: 829284
End: 830537
Strand: Direct
Name: 187735210
Synonym: Amuc_0704
Alternate gene names: NA
Gene position: 829284-830537 (Clockwise)
Preceding gene: 187735209
Following gene: 187735211
Centisome position: 31.13
GC content: 57.5
Gene sequence:
>1254_bases ATGTCCACTCTCCATCCCTTCCCCGCCCTGCGTCCTCCTCGGGAACTGGCCGCGCGGGTCTCCTCCCTCCCCTATGATGT CATGAACCACCGGGAAGCCGAGGAAATGGCCGCCGGAAATGACGCCTCTTTCCTCCATATCTGCCGTTCCGACATCGACA CGAGCGAAGCTGCCATCCATGCCCCGGAAACCTACGCCAAGGCCAGGGAAAACCTGGAAAGGTTTGTCCGCGAAGGGTAC CTCTTCCGGGATGAACGGCCGTCTTTCTACATCTACCGACAAATCATGTGGGGGCGCGTACAGACGGGCATCGTCGGCTG CGCCTCCGTGGATGAATATGCCAGCGGCGCCATTAAAAAGCACGAACTGACCCGCAGGGAAAAGGAACTTGACCGGATTG AGCATTTTGACGCCTGCTCCGCTCAGACGGAACCGGTATTCCTGGCCTACCGCAAACATGAAGGTCTTTCCGCCATCATC CGGGAATGGATTAAATTCCACAAACCCGAATATGATTTTACCACGGAGGACGGCGTCACCCATATCCTGTGGCCCGTTTC CGAGCCCGGCACGGTGGAAGACATCCGCAAAAGCTTTGAGGAAGTGGACGCCCTTTACATTGCGGACGGGCACCACCGCA CGGCTTCCAGCGCTGCCGTTTCCGCCAGGCGCCGCCAGAAACACCCGGACTACACGGGGCAGGAAGAATTCAACTACCTG ATGGCTGTCGTCTTTTGTGATGAAGACCTTTTCATCATGGACTACAACCGCGTCATACGCGACCTGAACGGCCTGACTGA AGAGGAATTCATGGAAAAACTCCGTACCTCCTTTGACATAAATCCTGTGGATACCATTCCCGGAGAAGGCTACGCCCCCC GCGCCAAGCATGAGTTCGGCATGTATCTGAATGGACGCTGGTATTCCGCCACGGCCAAACCGGGAACCTTCCCGGTCGGC CATCCCATCGAAAGCCTGGACTGCGCCATCCTCCAGGCGAATGTGCTGGCTCCCATTCTGGGCATTGACGATCCACGCAC GAGCGACCGCATCGACTTCGTAGGAGGAATCCGCGGTCTGGGAGAACTGGAACGCCGCTGTTCCGGGGAAATGGCGCTGG CTTTCTCCCTGTATCCCGTCACCATGGCCGACCTTTTCCGCGTAGCGGACGCCGGAGAAATCATGCCTCCCAAATCCACC TGGTTTGAACCCAAGCTGCGCAGCGGGCTTTTTATCCATACCATTGAACAATAA
Upstream 100 bases:
>100_bases TGCTGCTGTTCATTGCGGCATGCATTTTGGCCGGGCTTGTTTCCAGCATTCGTGCGCTATATCATCCTTCCCATTACTGA CTTTCCGAACTCTTCCTTCC
Downstream 100 bases:
>100_bases TCTTTTCCACCGTACCAACATGAACAAGGTCCTTATTCCTACCAAACTCTCCGACGTAGCGGCCAACACGCTTAAAACGG CCGGCTATGAAGTCATCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSTLHPFPALRPPRELAARVSSLPYDVMNHREAEEMAAGNDASFLHICRSDIDTSEAAIHAPETYAKARENLERFVREGY LFRDERPSFYIYRQIMWGRVQTGIVGCASVDEYASGAIKKHELTRREKELDRIEHFDACSAQTEPVFLAYRKHEGLSAII REWIKFHKPEYDFTTEDGVTHILWPVSEPGTVEDIRKSFEEVDALYIADGHHRTASSAAVSARRRQKHPDYTGQEEFNYL MAVVFCDEDLFIMDYNRVIRDLNGLTEEEFMEKLRTSFDINPVDTIPGEGYAPRAKHEFGMYLNGRWYSATAKPGTFPVG HPIESLDCAILQANVLAPILGIDDPRTSDRIDFVGGIRGLGELERRCSGEMALAFSLYPVTMADLFRVADAGEIMPPKST WFEPKLRSGLFIHTIEQ
Sequences:
>Translated_417_residues MSTLHPFPALRPPRELAARVSSLPYDVMNHREAEEMAAGNDASFLHICRSDIDTSEAAIHAPETYAKARENLERFVREGY LFRDERPSFYIYRQIMWGRVQTGIVGCASVDEYASGAIKKHELTRREKELDRIEHFDACSAQTEPVFLAYRKHEGLSAII REWIKFHKPEYDFTTEDGVTHILWPVSEPGTVEDIRKSFEEVDALYIADGHHRTASSAAVSARRRQKHPDYTGQEEFNYL MAVVFCDEDLFIMDYNRVIRDLNGLTEEEFMEKLRTSFDINPVDTIPGEGYAPRAKHEFGMYLNGRWYSATAKPGTFPVG HPIESLDCAILQANVLAPILGIDDPRTSDRIDFVGGIRGLGELERRCSGEMALAFSLYPVTMADLFRVADAGEIMPPKST WFEPKLRSGLFIHTIEQ >Mature_416_residues STLHPFPALRPPRELAARVSSLPYDVMNHREAEEMAAGNDASFLHICRSDIDTSEAAIHAPETYAKARENLERFVREGYL FRDERPSFYIYRQIMWGRVQTGIVGCASVDEYASGAIKKHELTRREKELDRIEHFDACSAQTEPVFLAYRKHEGLSAIIR EWIKFHKPEYDFTTEDGVTHILWPVSEPGTVEDIRKSFEEVDALYIADGHHRTASSAAVSARRRQKHPDYTGQEEFNYLM AVVFCDEDLFIMDYNRVIRDLNGLTEEEFMEKLRTSFDINPVDTIPGEGYAPRAKHEFGMYLNGRWYSATAKPGTFPVGH PIESLDCAILQANVLAPILGIDDPRTSDRIDFVGGIRGLGELERRCSGEMALAFSLYPVTMADLFRVADAGEIMPPKSTW FEPKLRSGLFIHTIEQ
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47478; Mature: 47347
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLHPFPALRPPRELAARVSSLPYDVMNHREAEEMAAGNDASFLHICRSDIDTSEAAIH CCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCHHEEE APETYAKARENLERFVREGYLFRDERPSFYIYRQIMWGRVQTGIVGCASVDEYASGAIKK CCHHHHHHHHHHHHHHHCCCEEECCCCCEEEHHHHHHHHHHHCEEECCCHHHHHHCCHHH HELTRREKELDRIEHFDACSAQTEPVFLAYRKHEGLSAIIREWIKFHKPEYDFTTEDGVT HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCE HILWPVSEPGTVEDIRKSFEEVDALYIADGHHRTASSAAVSARRRQKHPDYTGQEEFNYL EEEECCCCCCCHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHE MAVVFCDEDLFIMDYNRVIRDLNGLTEEEFMEKLRTSFDINPVDTIPGEGYAPRAKHEFG EEEEEECCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC MYLNGRWYSATAKPGTFPVGHPIESLDCAILQANVLAPILGIDDPRTSDRIDFVGGIRGL EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCH GELERRCSGEMALAFSLYPVTMADLFRVADAGEIMPPKSTWFEPKLRSGLFIHTIEQ HHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEEEEECC >Mature Secondary Structure STLHPFPALRPPRELAARVSSLPYDVMNHREAEEMAAGNDASFLHICRSDIDTSEAAIH CCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCHHEEE APETYAKARENLERFVREGYLFRDERPSFYIYRQIMWGRVQTGIVGCASVDEYASGAIKK CCHHHHHHHHHHHHHHHCCCEEECCCCCEEEHHHHHHHHHHHCEEECCCHHHHHHCCHHH HELTRREKELDRIEHFDACSAQTEPVFLAYRKHEGLSAIIREWIKFHKPEYDFTTEDGVT HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCE HILWPVSEPGTVEDIRKSFEEVDALYIADGHHRTASSAAVSARRRQKHPDYTGQEEFNYL EEEECCCCCCCHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHE MAVVFCDEDLFIMDYNRVIRDLNGLTEEEFMEKLRTSFDINPVDTIPGEGYAPRAKHEFG EEEEEECCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC MYLNGRWYSATAKPGTFPVGHPIESLDCAILQANVLAPILGIDDPRTSDRIDFVGGIRGL EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCH GELERRCSGEMALAFSLYPVTMADLFRVADAGEIMPPKSTWFEPKLRSGLFIHTIEQ HHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA