| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187733179
Identifier: 187733179
GI number: 187733179
Start: 3071457
End: 3071948
Strand: Reverse
Name: 187733179
Synonym: SbBS512_E3297
Alternate gene names: NA
Gene position: 3071948-3071457 (Counterclockwise)
Preceding gene: 187734081
Following gene: 187734228
Centisome position: 66.55
GC content: 53.05
Gene sequence:
>492_bases ATGTTATTCAACAACAACGAATGGAAACTGTCAGTCACCGACATCGACCTTTACGCAAATACTTGCAAGCTGGACGGTCA GTCCTATCCGTTGTCGCTCGCTATCAAGACCCTCATTCCGGGCTATCTGTCAGGCCTGCCGTCTACCAGCCGCGAGGCAA TGGAGTTACTGGAAGCTCTGGCTGAAGCTGGTGTAGCTATTGGCAACTTCTTCAGTAATGACCTGCTGACCGCCTACCAA CGCCGCCAGATGAATAAGCGTGTCGAGGCTGAGCGTATCGCTAAAGAGCTGGCGTCTCAGAAAGAGCGTACCCGCGAAAT GTTCATGACCGAAGACGAATGGCAGAAAGAGCTACAGCGCCGCGAACAGGTCAAAGCTGAACGCCGGACATATGGTGAGA ACCTCCGCAGTGCTACCCATTCCGCTGGTCGCTCACGTGCATCAATTATGGCTGACCTCGATAGTGGCGCTAACTGGATG GACAGCTTGTAA
Upstream 100 bases:
>100_bases TCATTTTAAACCTTTTGAGATGACCGATGCGGGGAGACGCCGCAGGACTAAACACGCCTGTGGTCGACCGATAGTCTCAA CCTCAAAGGAGTACCAGCAT
Downstream 100 bases:
>100_bases GCAAGCGACCCTCATCTGAGAACACACGGTCCCTGACTGCCTGTTAGGGACTTCAAGTATTTGACTCAAGGAGATTAATT ATTATGACCATGACAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MLFNNNEWKLSVTDIDLYANTCKLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEALAEAGVAIGNFFSNDLLTAYQ RRQMNKRVEAERIAKELASQKERTREMFMTEDEWQKELQRREQVKAERRTYGENLRSATHSAGRSRASIMADLDSGANWM DSL
Sequences:
>Translated_163_residues MLFNNNEWKLSVTDIDLYANTCKLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEALAEAGVAIGNFFSNDLLTAYQ RRQMNKRVEAERIAKELASQKERTREMFMTEDEWQKELQRREQVKAERRTYGENLRSATHSAGRSRASIMADLDSGANWM DSL >Mature_163_residues MLFNNNEWKLSVTDIDLYANTCKLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEALAEAGVAIGNFFSNDLLTAYQ RRQMNKRVEAERIAKELASQKERTREMFMTEDEWQKELQRREQVKAERRTYGENLRSATHSAGRSRASIMADLDSGANWM DSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18573; Mature: 18573
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFNNNEWKLSVTDIDLYANTCKLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEAL CCCCCCCCEEEEEEEHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AEAGVAIGNFFSNDLLTAYQRRQMNKRVEAERIAKELASQKERTREMFMTEDEWQKELQR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REQVKAERRTYGENLRSATHSAGRSRASIMADLDSGANWMDSL HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure MLFNNNEWKLSVTDIDLYANTCKLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEAL CCCCCCCCEEEEEEEHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AEAGVAIGNFFSNDLLTAYQRRQMNKRVEAERIAKELASQKERTREMFMTEDEWQKELQR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REQVKAERRTYGENLRSATHSAGRSRASIMADLDSGANWMDSL HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA